RNA–Protein interactions for RNA: ENST00000417348.2

SLC39A1-206, Transcript of solute carrier family 39 member 1, humanhuman

TSL 3

Gene SLC39A1, Length 912 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-206ENST00000417348 RPGRIP1LQ68CZ1 1315 aa28.47■■■□□ 2.15
SLC39A1-206ENST00000417348 RIMS2Q9UQ26 1411 aa28.47■■■□□ 2.15
SLC39A1-206ENST00000417348 ANKRD30BQ9BXX2 1392 aa28.45■■■□□ 2.14
SLC39A1-206ENST00000417348 PLEKHG1Q9ULL1 1385 aa28.45■■■□□ 2.14
SLC39A1-206ENST00000417348 FOXD1Q16676 465 aa28.41■■■□□ 2.14
SLC39A1-206ENST00000417348 SPATA31E1Q6ZUB1 1445 aa28.41■■■□□ 2.14
SLC39A1-206ENST00000417348 CHGAP10645 457 aaKnown RBP28.4■■■□□ 2.14
SLC39A1-206ENST00000417348 NEXMIFQ5QGS0 1516 aa28.38■■■□□ 2.13
SLC39A1-206ENST00000417348 DIP2AQ14689 1571 aa28.37■■■□□ 2.13
SLC39A1-206ENST00000417348 IQSEC2Q5JU85 1478 aa28.36■■■□□ 2.13
SLC39A1-206ENST00000417348 LTBP4Q8N2S1 1624 aa28.36■■■□□ 2.13
SLC39A1-206ENST00000417348 VGFO15240 615 aaPredicted RBP28.34■■■□□ 2.13
SLC39A1-206ENST00000417348 PPP1R15AO75807 674 aaPredicted RBP28.34■■■□□ 2.13
SLC39A1-206ENST00000417348 STAC3Q96MF2 364 aa28.34■■■□□ 2.13
SLC39A1-206ENST00000417348 CPS1P31327 1500 aa28.33■■■□□ 2.13
SLC39A1-206ENST00000417348 SETBP1Q9Y6X0 1596 aa28.33■■■□□ 2.13
SLC39A1-206ENST00000417348 PIK3R4Q99570 1358 aa28.33■■■□□ 2.13
SLC39A1-206ENST00000417348 ZNF326Q5BKZ1 582 aaKnown RBP28.32■■■□□ 2.12
SLC39A1-206ENST00000417348 TBX22Q9Y458 520 aa28.32■■■□□ 2.12
SLC39A1-206ENST00000417348 PPLO60437 1756 aa28.3■■■□□ 2.12
SLC39A1-206ENST00000417348 ADAMTS13Q76LX8 1427 aa28.26■■■□□ 2.12
SLC39A1-206ENST00000417348 IFT172Q9UG01 1749 aa28.26■■■□□ 2.12
SLC39A1-206ENST00000417348 ZNF335Q9H4Z2 1342 aaPredicted RBP28.25■■■□□ 2.11
SLC39A1-206ENST00000417348 NWD1Q149M9 1564 aa28.23■■■□□ 2.11
SLC39A1-206ENST00000417348 DHX57Q6P158 1386 aaKnown RBP28.23■■■□□ 2.11
SLC39A1-206ENST00000417348 MYOM2P54296 1465 aa28.22■■■□□ 2.11
SLC39A1-206ENST00000417348 CERKQ8TCT0 537 aa28.22■■■□□ 2.11
SLC39A1-206ENST00000417348 NRXN3Q9Y4C0 1643 aa28.21■■■□□ 2.11
SLC39A1-206ENST00000417348 KCNA6P17658 529 aa28.21■■■□□ 2.11
SLC39A1-206ENST00000417348 NKTRP30414 1462 aaKnown RBP28.2■■■□□ 2.1
SLC39A1-206ENST00000417348 NRXN1Q9ULB1 1477 aa28.18■■■□□ 2.1
SLC39A1-206ENST00000417348 CHD2O14647 1828 aaKnown RBP28.18■■■□□ 2.1
SLC39A1-206ENST00000417348 SLC26A8Q96RN1 970 aa28.17■■■□□ 2.1
SLC39A1-206ENST00000417348 BCANQ96GW7 911 aa28.16■■■□□ 2.1
SLC39A1-206ENST00000417348 PRAG1Q86YV5 1406 aa28.15■■■□□ 2.1
SLC39A1-206ENST00000417348 RGL3Q3MIN7 710 aa28.14■■■□□ 2.1
SLC39A1-206ENST00000417348 PIK3C2GO75747 1445 aa28.14■■■□□ 2.1
SLC39A1-206ENST00000417348 NCOA3Q9Y6Q9 1424 aa28.14■■■□□ 2.1
SLC39A1-206ENST00000417348 STRCP1A6NGW2 1772 aa28.14■■■□□ 2.09
SLC39A1-206ENST00000417348 NUTM2DQ5VT03 806 aaPredicted RBP28.13■■■□□ 2.09
SLC39A1-206ENST00000417348 LRRC7Q96NW7 1537 aa28.11■■■□□ 2.09
SLC39A1-206ENST00000417348 ALKQ9UM73 1620 aa28.1■■■□□ 2.09
SLC39A1-206ENST00000417348 SETD1AO15047 1707 aaKnown RBP28.1■■■□□ 2.09
SLC39A1-206ENST00000417348 LAMC1P11047 1609 aa28.1■■■□□ 2.09
SLC39A1-206ENST00000417348 PCGF6Q9BYE7 350 aa28.09■■■□□ 2.09
SLC39A1-206ENST00000417348 CLSPNQ9HAW4 1339 aa28.09■■■□□ 2.09
SLC39A1-206ENST00000417348 ADGRF5Q8IZF2 1346 aa28.07■■■□□ 2.08
SLC39A1-206ENST00000417348 XRN1Q8IZH2 1706 aaKnown RBP28.06■■■□□ 2.08
SLC39A1-206ENST00000417348 METP08581 1390 aa28.03■■■□□ 2.08
SLC39A1-206ENST00000417348 FBXO41Q8TF61 875 aa28.03■■■□□ 2.08
SLC39A1-206ENST00000417348 C14orf93Q9H972 538 aaKnown RBP28.02■■■□□ 2.08
SLC39A1-206ENST00000417348 PTCH1Q13635 1447 aa28.01■■■□□ 2.07
SLC39A1-206ENST00000417348 PTPRUQ92729 1446 aa28.01■■■□□ 2.07
SLC39A1-206ENST00000417348 AMOTL2Q9Y2J4 779 aa28■■■□□ 2.07
SLC39A1-206ENST00000417348 DCAF11Q8TEB1 546 aa27.99■■■□□ 2.07
SLC39A1-206ENST00000417348 TECPR2O15040 1411 aa27.98■■■□□ 2.07
SLC39A1-206ENST00000417348 TMEM94Q12767 1356 aa27.97■■■□□ 2.07
SLC39A1-206ENST00000417348 PROSER2Q86WR7 435 aaPredicted RBP27.96■■■□□ 2.07
SLC39A1-206ENST00000417348 XIRP1Q702N8 1843 aaKnown RBP27.96■■■□□ 2.07
SLC39A1-206ENST00000417348 ABCC11Q96J66 1382 aa27.95■■■□□ 2.06
SLC39A1-206ENST00000417348 KIAA1210Q9ULL0 1709 aa27.95■■■□□ 2.06
SLC39A1-206ENST00000417348 SIRT1Q96EB6 747 aa27.94■■■□□ 2.06
SLC39A1-206ENST00000417348 LRPPRCP42704 1394 aaKnown RBP27.94■■■□□ 2.06
SLC39A1-206ENST00000417348 KNDC1Q76NI1 1749 aa27.92■■■□□ 2.06
SLC39A1-206ENST00000417348 TOM1O60784 492 aa27.92■■■□□ 2.06
SLC39A1-206ENST00000417348 DCCP43146 1447 aa27.91■■■□□ 2.06
SLC39A1-206ENST00000417348 SIN3AQ96ST3 1273 aa27.9■■■□□ 2.06
SLC39A1-206ENST00000417348 ASXL1Q8IXJ9 1541 aa27.89■■■□□ 2.06
SLC39A1-206ENST00000417348 TIMELESSQ9UNS1 1208 aa27.89■■■□□ 2.06
SLC39A1-206ENST00000417348 ADGRB1O14514 1584 aa27.88■■■□□ 2.05
SLC39A1-206ENST00000417348 FAM135BQ49AJ0 1406 aa27.88■■■□□ 2.05
SLC39A1-206ENST00000417348 MSH6P52701 1360 aa27.87■■■□□ 2.05
SLC39A1-206ENST00000417348 YTHDC2Q9H6S0 1430 aaKnown RBP27.87■■■□□ 2.05
SLC39A1-206ENST00000417348 L3MBTL2Q969R5 705 aa27.87■■■□□ 2.05
SLC39A1-206ENST00000417348 C19orf44Q9H6X5 657 aa27.87■■■□□ 2.05
SLC39A1-206ENST00000417348 CFAP70Q5T0N1 1121 aa27.86■■■□□ 2.05
SLC39A1-206ENST00000417348 DLC1Q96QB1 1528 aa27.86■■■□□ 2.05
SLC39A1-206ENST00000417348 SENP3Q9H4L4 574 aaPredicted RBP27.85■■■□□ 2.05
SLC39A1-206ENST00000417348 KDM2AQ9Y2K7 1162 aa27.85■■■□□ 2.05
SLC39A1-206ENST00000417348 UBAP1LF5GYI3 381 aa27.82■■■□□ 2.04
SLC39A1-206ENST00000417348 NEUROD1Q13562 356 aa27.82■■■□□ 2.04
SLC39A1-206ENST00000417348 TONSLQ96HA7 1378 aa27.82■■■□□ 2.04
SLC39A1-206ENST00000417348 ROBO2Q9HCK4 1378 aa27.82■■■□□ 2.04
SLC39A1-206ENST00000417348 ADGRL3Q9HAR2 1447 aa27.82■■■□□ 2.04
SLC39A1-206ENST00000417348 CADPS2Q86UW7 1296 aa27.8■■■□□ 2.04
SLC39A1-206ENST00000417348 TMEM132EQ6IEE7 984 aa27.77■■■□□ 2.04
SLC39A1-206ENST00000417348 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.77■■■□□ 2.04
SLC39A1-206ENST00000417348 ILDR1Q86SU0 546 aaPredicted RBP27.73■■■□□ 2.03
SLC39A1-206ENST00000417348 ATF3P18847 181 aa27.72■■■□□ 2.03
SLC39A1-206ENST00000417348 C14orf37Q86TY3 774 aa27.72■■■□□ 2.03
SLC39A1-206ENST00000417348 NALCNQ8IZF0 1738 aa27.72■■■□□ 2.03
SLC39A1-206ENST00000417348 TRPM1Q7Z4N2 1603 aa27.71■■■□□ 2.03
SLC39A1-206ENST00000417348 CDC42BPGQ6DT37 1551 aa27.71■■■□□ 2.03
SLC39A1-206ENST00000417348 SLAIN2Q9P270 581 aa27.69■■■□□ 2.02
SLC39A1-206ENST00000417348 GPRASP1Q5JY77 1395 aa27.69■■■□□ 2.02
SLC39A1-206ENST00000417348 STK26Q9P289 416 aa27.68■■■□□ 2.02
SLC39A1-206ENST00000417348 CCER1Q8TC90 406 aaPredicted RBP27.67■■■□□ 2.02
SLC39A1-206ENST00000417348 RBM33Q96EV2 1170 aaKnown RBP27.67■■■□□ 2.02
SLC39A1-206ENST00000417348 ADGRB2O60241 1585 aa27.65■■■□□ 2.02
SLC39A1-206ENST00000417348 ARHGEF28Q8N1W1 1705 aaKnown RBP27.64■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms