RNA–Protein interactions for RNA: ENST00000417135.1

LINC02247-201, Transcript of long intergenic non-protein coding RNA 2247, humanhuman

TSL 3 BASIC

Gene LINC02247, Length 743 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02247-201ENST00000417135 PPARGC1BQ86YN6 1023 aaKnown RBP27.21■■□□□ 1.95
LINC02247-201ENST00000417135 TMEM94Q12767 1356 aa27.21■■□□□ 1.95
LINC02247-201ENST00000417135 TET3O43151 1660 aa27.21■■□□□ 1.95
LINC02247-201ENST00000417135 RBM33Q96EV2 1170 aaKnown RBP27.16■■□□□ 1.94
LINC02247-201ENST00000417135 UNC13BO14795 1591 aa27.16■■□□□ 1.94
LINC02247-201ENST00000417135 RIMS2Q9UQ26 1411 aa27.16■■□□□ 1.94
LINC02247-201ENST00000417135 NUP155O75694 1391 aa27.14■■□□□ 1.94
LINC02247-201ENST00000417135 PLEKHG1Q9ULL1 1385 aa27.14■■□□□ 1.94
LINC02247-201ENST00000417135 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.14■■□□□ 1.94
LINC02247-201ENST00000417135 GCC2Q8IWJ2 1684 aa27.14■■□□□ 1.93
LINC02247-201ENST00000417135 ZFYVE9O95405 1425 aa27.13■■□□□ 1.93
LINC02247-201ENST00000417135 XIRP1Q702N8 1843 aaKnown RBP27.12■■□□□ 1.93
LINC02247-201ENST00000417135 FAM135BQ49AJ0 1406 aa27.11■■□□□ 1.93
LINC02247-201ENST00000417135 NKTRP30414 1462 aaKnown RBP27.1■■□□□ 1.93
LINC02247-201ENST00000417135 TMEM131LA2VDJ0 1609 aa27.09■■□□□ 1.93
LINC02247-201ENST00000417135 NUTM2DQ5VT03 806 aaPredicted RBP27.08■■□□□ 1.93
LINC02247-201ENST00000417135 MSH6P52701 1360 aa27.08■■□□□ 1.93
LINC02247-201ENST00000417135 TBX22Q9Y458 520 aa27.07■■□□□ 1.92
LINC02247-201ENST00000417135 IQGAP3Q86VI3 1631 aa27.06■■□□□ 1.92
LINC02247-201ENST00000417135 E9PCH4 1651 aa27.06■■□□□ 1.92
LINC02247-201ENST00000417135 NWD1Q149M9 1564 aa27.05■■□□□ 1.92
LINC02247-201ENST00000417135 MYO5BQ9ULV0 1848 aa27.05■■□□□ 1.92
LINC02247-201ENST00000417135 C14orf37Q86TY3 774 aa27.01■■□□□ 1.91
LINC02247-201ENST00000417135 SLAIN2Q9P270 581 aa27.01■■□□□ 1.91
LINC02247-201ENST00000417135 ROBO1Q9Y6N7 1651 aa26.96■■□□□ 1.91
LINC02247-201ENST00000417135 CHD2O14647 1828 aaKnown RBP26.95■■□□□ 1.91
LINC02247-201ENST00000417135 ZNF326Q5BKZ1 582 aaKnown RBP26.95■■□□□ 1.9
LINC02247-201ENST00000417135 ADAMTS13Q76LX8 1427 aa26.95■■□□□ 1.9
LINC02247-201ENST00000417135 NCOA3Q9Y6Q9 1424 aa26.94■■□□□ 1.9
LINC02247-201ENST00000417135 PIK3R4Q99570 1358 aa26.94■■□□□ 1.9
LINC02247-201ENST00000417135 DIP2AQ14689 1571 aa26.92■■□□□ 1.9
LINC02247-201ENST00000417135 ATF3P18847 181 aa26.9■■□□□ 1.9
LINC02247-201ENST00000417135 AMOTL2Q9Y2J4 779 aa26.9■■□□□ 1.9
LINC02247-201ENST00000417135 CADPS2Q86UW7 1296 aa26.89■■□□□ 1.9
LINC02247-201ENST00000417135 C19orf44Q9H6X5 657 aa26.89■■□□□ 1.9
LINC02247-201ENST00000417135 RRBP1Q9P2E9 1410 aaKnown RBP26.89■■□□□ 1.89
LINC02247-201ENST00000417135 RGS17Q9UGC6 210 aaPredicted RBP26.88■■□□□ 1.89
LINC02247-201ENST00000417135 TRPM2O94759 1503 aa26.87■■□□□ 1.89
LINC02247-201ENST00000417135 TRIM52Q96A61 297 aa26.84■■□□□ 1.89
LINC02247-201ENST00000417135 SPHKAPQ2M3C7 1700 aa26.84■■□□□ 1.89
LINC02247-201ENST00000417135 NAIPQ13075 1403 aa26.83■■□□□ 1.89
LINC02247-201ENST00000417135 JCADQ9P266 1359 aa26.83■■□□□ 1.88
LINC02247-201ENST00000417135 PHLPP1O60346 1717 aa26.82■■□□□ 1.88
LINC02247-201ENST00000417135 PTPRUQ92729 1446 aa26.81■■□□□ 1.88
LINC02247-201ENST00000417135 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.76■■□□□ 1.88
LINC02247-201ENST00000417135 SETBP1Q9Y6X0 1596 aa26.76■■□□□ 1.87
LINC02247-201ENST00000417135 POTEAQ6S8J7 498 aa26.75■■□□□ 1.87
LINC02247-201ENST00000417135 METP08581 1390 aa26.74■■□□□ 1.87
LINC02247-201ENST00000417135 CLTCL1P53675 1640 aa26.73■■□□□ 1.87
LINC02247-201ENST00000417135 SLC4A1APQ9BWU0 796 aaKnown RBP26.73■■□□□ 1.87
LINC02247-201ENST00000417135 HFM1A2PYH4 1435 aa26.73■■□□□ 1.87
LINC02247-201ENST00000417135 NRXN3Q9Y4C0 1643 aa26.72■■□□□ 1.87
LINC02247-201ENST00000417135 MEX3CQ5U5Q3 659 aaKnown RBP26.71■■□□□ 1.87
LINC02247-201ENST00000417135 BRINP3Q76B58 766 aa26.71■■□□□ 1.87
LINC02247-201ENST00000417135 SPATA31A6Q5VVP1 1343 aa26.7■■□□□ 1.87
LINC02247-201ENST00000417135 VGFO15240 615 aaPredicted RBP26.7■■□□□ 1.86
LINC02247-201ENST00000417135 DCCP43146 1447 aa26.7■■□□□ 1.86
LINC02247-201ENST00000417135 COL16A1Q07092 1604 aaPredicted RBP26.69■■□□□ 1.86
LINC02247-201ENST00000417135 NEXMIFQ5QGS0 1516 aa26.69■■□□□ 1.86
LINC02247-201ENST00000417135 XRN1Q8IZH2 1706 aaKnown RBP26.68■■□□□ 1.86
LINC02247-201ENST00000417135 AHDC1Q5TGY3 1603 aaPredicted RBP26.66■■□□□ 1.86
LINC02247-201ENST00000417135 KIF1BO60333 1816 aa26.66■■□□□ 1.86
LINC02247-201ENST00000417135 RPGRIP1LQ68CZ1 1315 aa26.64■■□□□ 1.85
LINC02247-201ENST00000417135 MST1RQ04912 1400 aa26.61■■□□□ 1.85
LINC02247-201ENST00000417135 ADGRL3Q9HAR2 1447 aa26.6■■□□□ 1.85
LINC02247-201ENST00000417135 NUTM2BA6NNL0 878 aaPredicted RBP26.59■■□□□ 1.85
LINC02247-201ENST00000417135 NUTM2EB1AL46 878 aaPredicted RBP26.59■■□□□ 1.85
LINC02247-201ENST00000417135 ZNF772Q68DY9 489 aaPredicted RBP26.59■■□□□ 1.85
LINC02247-201ENST00000417135 NUTM2AQ8IVF1 878 aaPredicted RBP26.59■■□□□ 1.85
LINC02247-201ENST00000417135 ASXL1Q8IXJ9 1541 aa26.59■■□□□ 1.85
LINC02247-201ENST00000417135 LRP6O75581 1613 aa26.58■■□□□ 1.85
LINC02247-201ENST00000417135 FOXD1Q16676 465 aa26.58■■□□□ 1.85
LINC02247-201ENST00000417135 LRRC59Q96AG4 307 aaKnown RBP26.57■■□□□ 1.84
LINC02247-201ENST00000417135 SHPRHQ149N8 1683 aa26.55■■□□□ 1.84
LINC02247-201ENST00000417135 PTCH1Q13635 1447 aa26.53■■□□□ 1.84
LINC02247-201ENST00000417135 SETD5Q9C0A6 1442 aa26.53■■□□□ 1.84
LINC02247-201ENST00000417135 DDX17Q92841 729 aaKnown RBP26.52■■□□□ 1.84
LINC02247-201ENST00000417135 ROBO2Q9HCK4 1378 aa26.52■■□□□ 1.84
LINC02247-201ENST00000417135 CCDC144AA2RUR9 1427 aa26.5■■□□□ 1.83
LINC02247-201ENST00000417135 RGL3Q3MIN7 710 aa26.5■■□□□ 1.83
LINC02247-201ENST00000417135 MPHOSPH9Q99550 1183 aa26.5■■□□□ 1.83
LINC02247-201ENST00000417135 C1orf167Q5SNV9 1468 aa26.49■■□□□ 1.83
LINC02247-201ENST00000417135 NALCNQ8IZF0 1738 aa26.48■■□□□ 1.83
LINC02247-201ENST00000417135 NHSL1Q5SYE7 1610 aa26.47■■□□□ 1.83
LINC02247-201ENST00000417135 RXRBP28702 533 aa26.45■■□□□ 1.82
LINC02247-201ENST00000417135 ADGRF5Q8IZF2 1346 aa26.44■■□□□ 1.82
LINC02247-201ENST00000417135 PPLO60437 1756 aa26.44■■□□□ 1.82
LINC02247-201ENST00000417135 ORAI2Q96SN7 254 aa26.44■■□□□ 1.82
LINC02247-201ENST00000417135 SETD1AO15047 1707 aaKnown RBP26.44■■□□□ 1.82
LINC02247-201ENST00000417135 AFF2P51816 1311 aa26.43■■□□□ 1.82
LINC02247-201ENST00000417135 PRAG1Q86YV5 1406 aa26.43■■□□□ 1.82
LINC02247-201ENST00000417135 ACIN1Q9UKV3 1341 aaKnown RBP26.42■■□□□ 1.82
LINC02247-201ENST00000417135 C8orf37Q96NL8 207 aa26.42■■□□□ 1.82
LINC02247-201ENST00000417135 STK26Q9P289 416 aa26.42■■□□□ 1.82
LINC02247-201ENST00000417135 PNPLA6Q8IY17 1366 aa26.42■■□□□ 1.82
LINC02247-201ENST00000417135 ANKRD30BQ9BXX2 1392 aa26.42■■□□□ 1.82
LINC02247-201ENST00000417135 SPATA31E1Q6ZUB1 1445 aa26.38■■□□□ 1.81
LINC02247-201ENST00000417135 ESCO1Q5FWF5 840 aa26.37■■□□□ 1.81
LINC02247-201ENST00000417135 SOS2Q07890 1332 aaPredicted RBP26.37■■□□□ 1.81
LINC02247-201ENST00000417135 ADAMTS2O95450 1211 aa26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms