RNA–Protein interactions for RNA: ENST00000417101.1

ACTB-203, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 472 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-203ENST00000417101 NUP155O75694 1391 aa33.32■■■□□ 2.92
ACTB-203ENST00000417101 TMEM94Q12767 1356 aa33.32■■■□□ 2.92
ACTB-203ENST00000417101 MED1Q15648 1581 aaPredicted RBP33.3■■■□□ 2.92
ACTB-203ENST00000417101 RIMS2Q9UQ26 1411 aa33.3■■■□□ 2.92
ACTB-203ENST00000417101 PPP1R15AO75807 674 aaPredicted RBP33.3■■■□□ 2.92
ACTB-203ENST00000417101 CHGAP10645 457 aaKnown RBP33.3■■■□□ 2.92
ACTB-203ENST00000417101 IQGAP3Q86VI3 1631 aa33.3■■■□□ 2.92
ACTB-203ENST00000417101 E9PCH4 1651 aa33.29■■■□□ 2.92
ACTB-203ENST00000417101 PROSER2Q86WR7 435 aaPredicted RBP33.29■■■□□ 2.92
ACTB-203ENST00000417101 TMEM131LA2VDJ0 1609 aa33.28■■■□□ 2.92
ACTB-203ENST00000417101 HDGFP51858 240 aaKnown RBP33.28■■■□□ 2.92
ACTB-203ENST00000417101 MYO5BQ9ULV0 1848 aa33.28■■■□□ 2.92
ACTB-203ENST00000417101 PLEKHG1Q9ULL1 1385 aa33.27■■■□□ 2.92
ACTB-203ENST00000417101 RBM33Q96EV2 1170 aaKnown RBP33.26■■■□□ 2.91
ACTB-203ENST00000417101 NKTRP30414 1462 aaKnown RBP33.21■■■□□ 2.91
ACTB-203ENST00000417101 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.21■■■□□ 2.91
ACTB-203ENST00000417101 NWD1Q149M9 1564 aa33.21■■■□□ 2.91
ACTB-203ENST00000417101 NUTM2DQ5VT03 806 aaPredicted RBP33.19■■■□□ 2.9
ACTB-203ENST00000417101 FAM135BQ49AJ0 1406 aa33.16■■■□□ 2.9
ACTB-203ENST00000417101 TBX22Q9Y458 520 aa33.15■■■□□ 2.9
ACTB-203ENST00000417101 RRBP1Q9P2E9 1410 aaKnown RBP33.14■■■□□ 2.9
ACTB-203ENST00000417101 PHF23Q9BUL5 403 aaPredicted RBP33.14■■■□□ 2.9
ACTB-203ENST00000417101 MSH6P52701 1360 aa33.1■■■□□ 2.89
ACTB-203ENST00000417101 ADAMTS13Q76LX8 1427 aa33.09■■■□□ 2.89
ACTB-203ENST00000417101 CHD2O14647 1828 aaKnown RBP33.09■■■□□ 2.89
ACTB-203ENST00000417101 ROBO1Q9Y6N7 1651 aa33.04■■■□□ 2.88
ACTB-203ENST00000417101 NAIPQ13075 1403 aa33.03■■■□□ 2.88
ACTB-203ENST00000417101 DIP2AQ14689 1571 aa33.02■■■□□ 2.88
ACTB-203ENST00000417101 SLAIN2Q9P270 581 aa33.02■■■□□ 2.88
ACTB-203ENST00000417101 SPHKAPQ2M3C7 1700 aa33.02■■■□□ 2.88
ACTB-203ENST00000417101 PIK3R4Q99570 1358 aa33■■■□□ 2.87
ACTB-203ENST00000417101 ZNF326Q5BKZ1 582 aaKnown RBP32.99■■■□□ 2.87
ACTB-203ENST00000417101 C14orf37Q86TY3 774 aa32.99■■■□□ 2.87
ACTB-203ENST00000417101 NCOA3Q9Y6Q9 1424 aa32.97■■■□□ 2.87
ACTB-203ENST00000417101 TRPM2O94759 1503 aa32.95■■■□□ 2.87
ACTB-203ENST00000417101 AMOTL2Q9Y2J4 779 aa32.94■■■□□ 2.86
ACTB-203ENST00000417101 TRIM52Q96A61 297 aa32.92■■■□□ 2.86
ACTB-203ENST00000417101 PTPRUQ92729 1446 aa32.92■■■□□ 2.86
ACTB-203ENST00000417101 HFM1A2PYH4 1435 aa32.9■■■□□ 2.86
ACTB-203ENST00000417101 CLTCL1P53675 1640 aa32.89■■■□□ 2.86
ACTB-203ENST00000417101 C19orf44Q9H6X5 657 aa32.89■■■□□ 2.86
ACTB-203ENST00000417101 RGS17Q9UGC6 210 aaPredicted RBP32.88■■■□□ 2.85
ACTB-203ENST00000417101 SETBP1Q9Y6X0 1596 aa32.87■■■□□ 2.85
ACTB-203ENST00000417101 CADPS2Q86UW7 1296 aa32.87■■■□□ 2.85
ACTB-203ENST00000417101 NRXN3Q9Y4C0 1643 aa32.87■■■□□ 2.85
ACTB-203ENST00000417101 ATF3P18847 181 aa32.86■■■□□ 2.85
ACTB-203ENST00000417101 PHLPP1O60346 1717 aa32.83■■■□□ 2.85
ACTB-203ENST00000417101 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.83■■■□□ 2.85
ACTB-203ENST00000417101 METP08581 1390 aa32.82■■■□□ 2.84
ACTB-203ENST00000417101 NEXMIFQ5QGS0 1516 aa32.82■■■□□ 2.84
ACTB-203ENST00000417101 SLC4A1APQ9BWU0 796 aaKnown RBP32.81■■■□□ 2.84
ACTB-203ENST00000417101 JCADQ9P266 1359 aa32.79■■■□□ 2.84
ACTB-203ENST00000417101 XRN1Q8IZH2 1706 aaKnown RBP32.78■■■□□ 2.84
ACTB-203ENST00000417101 KIF1BO60333 1816 aa32.77■■■□□ 2.84
ACTB-203ENST00000417101 COL16A1Q07092 1604 aaPredicted RBP32.73■■■□□ 2.83
ACTB-203ENST00000417101 DCCP43146 1447 aa32.71■■■□□ 2.83
ACTB-203ENST00000417101 VGFO15240 615 aaPredicted RBP32.7■■■□□ 2.83
ACTB-203ENST00000417101 POTEAQ6S8J7 498 aa32.7■■■□□ 2.83
ACTB-203ENST00000417101 BRINP3Q76B58 766 aa32.7■■■□□ 2.83
ACTB-203ENST00000417101 AHDC1Q5TGY3 1603 aaPredicted RBP32.68■■■□□ 2.82
ACTB-203ENST00000417101 FOXD1Q16676 465 aa32.67■■■□□ 2.82
ACTB-203ENST00000417101 RPGRIP1LQ68CZ1 1315 aa32.65■■■□□ 2.82
ACTB-203ENST00000417101 MST1RQ04912 1400 aa32.63■■■□□ 2.81
ACTB-203ENST00000417101 ADGRL3Q9HAR2 1447 aa32.63■■■□□ 2.81
ACTB-203ENST00000417101 SPATA31A6Q5VVP1 1343 aa32.62■■■□□ 2.81
ACTB-203ENST00000417101 ASXL1Q8IXJ9 1541 aa32.59■■■□□ 2.81
ACTB-203ENST00000417101 LRP6O75581 1613 aa32.58■■■□□ 2.81
ACTB-203ENST00000417101 MEX3CQ5U5Q3 659 aaKnown RBP32.56■■■□□ 2.8
ACTB-203ENST00000417101 MPHOSPH9Q99550 1183 aa32.56■■■□□ 2.8
ACTB-203ENST00000417101 SETD1AO15047 1707 aaKnown RBP32.55■■■□□ 2.8
ACTB-203ENST00000417101 NALCNQ8IZF0 1738 aa32.55■■■□□ 2.8
ACTB-203ENST00000417101 PTCH1Q13635 1447 aa32.55■■■□□ 2.8
ACTB-203ENST00000417101 ROBO2Q9HCK4 1378 aa32.55■■■□□ 2.8
ACTB-203ENST00000417101 CCDC144AA2RUR9 1427 aa32.54■■■□□ 2.8
ACTB-203ENST00000417101 SHPRHQ149N8 1683 aa32.53■■■□□ 2.8
ACTB-203ENST00000417101 PPLO60437 1756 aa32.53■■■□□ 2.8
ACTB-203ENST00000417101 RGL3Q3MIN7 710 aa32.51■■■□□ 2.79
ACTB-203ENST00000417101 NUTM2BA6NNL0 878 aaPredicted RBP32.49■■■□□ 2.79
ACTB-203ENST00000417101 NUTM2EB1AL46 878 aaPredicted RBP32.49■■■□□ 2.79
ACTB-203ENST00000417101 NUTM2AQ8IVF1 878 aaPredicted RBP32.49■■■□□ 2.79
ACTB-203ENST00000417101 DDX17Q92841 729 aaKnown RBP32.49■■■□□ 2.79
ACTB-203ENST00000417101 SETD5Q9C0A6 1442 aa32.49■■■□□ 2.79
ACTB-203ENST00000417101 ADGRF5Q8IZF2 1346 aa32.48■■■□□ 2.79
ACTB-203ENST00000417101 NHSL1Q5SYE7 1610 aa32.48■■■□□ 2.79
ACTB-203ENST00000417101 PRAG1Q86YV5 1406 aa32.47■■■□□ 2.79
ACTB-203ENST00000417101 LRRC59Q96AG4 307 aaKnown RBP32.46■■■□□ 2.79
ACTB-203ENST00000417101 C1orf167Q5SNV9 1468 aa32.46■■■□□ 2.79
ACTB-203ENST00000417101 SPATA31E1Q6ZUB1 1445 aa32.45■■■□□ 2.79
ACTB-203ENST00000417101 ZNF772Q68DY9 489 aaPredicted RBP32.43■■■□□ 2.78
ACTB-203ENST00000417101 ANKRD30BQ9BXX2 1392 aa32.41■■■□□ 2.78
ACTB-203ENST00000417101 ORAI2Q96SN7 254 aa32.4■■■□□ 2.78
ACTB-203ENST00000417101 PNPLA6Q8IY17 1366 aa32.37■■■□□ 2.77
ACTB-203ENST00000417101 ACIN1Q9UKV3 1341 aaKnown RBP32.37■■■□□ 2.77
ACTB-203ENST00000417101 STK26Q9P289 416 aa32.37■■■□□ 2.77
ACTB-203ENST00000417101 IFT172Q9UG01 1749 aa32.33■■■□□ 2.77
ACTB-203ENST00000417101 TMEM132EQ6IEE7 984 aa32.32■■■□□ 2.76
ACTB-203ENST00000417101 AFF2P51816 1311 aa32.31■■■□□ 2.76
ACTB-203ENST00000417101 LRPPRCP42704 1394 aaKnown RBP32.31■■■□□ 2.76
ACTB-203ENST00000417101 PIK3C2GO75747 1445 aa32.3■■■□□ 2.76
ACTB-203ENST00000417101 WAPLQ7Z5K2 1190 aa32.3■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms