RNA–Protein interactions for RNA: ENST00000416982.1

LINC01287-201, Transcript of long intergenic non-protein coding RNA 1287, humanhuman

TSL 2 BASIC

Gene LINC01287, Length 2,624 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01287-201ENST00000416982 ZFYVE16Q7Z3T8 1539 aa13.38□□□□□ -0.27
LINC01287-201ENST00000416982 PLCB2Q00722 1185 aa13.37□□□□□ -0.27
LINC01287-201ENST00000416982 PLXNC1O60486 1568 aa13.37□□□□□ -0.27
LINC01287-201ENST00000416982 RTEL1-TNFRSF6BF6WH68 1400 aa13.37□□□□□ -0.27
LINC01287-201ENST00000416982 SENP3-EIF4A1A0A087X0R7 540 aa13.37□□□□□ -0.27
LINC01287-201ENST00000416982 ATP7AQ04656 1500 aa13.36□□□□□ -0.27
LINC01287-201ENST00000416982 CHGAP10645 457 aaKnown RBP13.35□□□□□ -0.27
LINC01287-201ENST00000416982 KDM5CP41229 1560 aa13.35□□□□□ -0.27
LINC01287-201ENST00000416982 ARID4BQ4LE39 1312 aaPredicted RBP13.34□□□□□ -0.27
LINC01287-201ENST00000416982 ARAP3Q8WWN8 1544 aa13.34□□□□□ -0.27
LINC01287-201ENST00000416982 SLC4A3P48751 1232 aa13.34□□□□□ -0.27
LINC01287-201ENST00000416982 BRD4O60885 1362 aaPredicted RBP13.34□□□□□ -0.27
LINC01287-201ENST00000416982 UNC13BO14795 1591 aa13.33□□□□□ -0.27
LINC01287-201ENST00000416982 TMC1Q8TDI8 760 aa13.33□□□□□ -0.28
LINC01287-201ENST00000416982 A2MP01023 1474 aa13.33□□□□□ -0.28
LINC01287-201ENST00000416982 UHRF1BP1Q6BDS2 1440 aa13.32□□□□□ -0.28
LINC01287-201ENST00000416982 FRAT2O75474 233 aaPredicted RBP13.32□□□□□ -0.28
LINC01287-201ENST00000416982 SKAP1Q86WV1 359 aa13.32□□□□□ -0.28
LINC01287-201ENST00000416982 KANK1Q14678 1352 aa13.32□□□□□ -0.28
LINC01287-201ENST00000416982 NUTM2DQ5VT03 806 aaPredicted RBP13.31□□□□□ -0.28
LINC01287-201ENST00000416982 ZNF518AQ6AHZ1 1483 aa13.31□□□□□ -0.28
LINC01287-201ENST00000416982 PDE3BQ13370 1112 aa13.31□□□□□ -0.28
LINC01287-201ENST00000416982 PRAG1Q86YV5 1406 aa13.31□□□□□ -0.28
LINC01287-201ENST00000416982 E9PCH4 1651 aa13.31□□□□□ -0.28
LINC01287-201ENST00000416982 IQGAP3Q86VI3 1631 aa13.3□□□□□ -0.28
LINC01287-201ENST00000416982 MAGI2Q86UL8 1455 aa13.3□□□□□ -0.28
LINC01287-201ENST00000416982 KTN1Q86UP2 1357 aaKnown RBP13.3□□□□□ -0.28
LINC01287-201ENST00000416982 POGZQ7Z3K3 1410 aa13.29□□□□□ -0.28
LINC01287-201ENST00000416982 RALGAPBQ86X10 1494 aa13.29□□□□□ -0.28
LINC01287-201ENST00000416982 KDM2BQ8NHM5 1336 aa13.29□□□□□ -0.28
LINC01287-201ENST00000416982 UGGT1Q9NYU2 1555 aa13.29□□□□□ -0.28
LINC01287-201ENST00000416982 RRAGDQ9NQL2 400 aaPredicted RBP13.28□□□□□ -0.28
LINC01287-201ENST00000416982 ATP10AO60312 1499 aa13.28□□□□□ -0.28
LINC01287-201ENST00000416982 MYBBP1AQ9BQG0 1328 aaKnown RBP13.28□□□□□ -0.28
LINC01287-201ENST00000416982 INO80Q9ULG1 1556 aaPredicted RBP13.27□□□□□ -0.28
LINC01287-201ENST00000416982 KIDINS220Q9ULH0 1771 aa13.27□□□□□ -0.28
LINC01287-201ENST00000416982 CRBNQ96SW2 442 aa13.27□□□□□ -0.29
LINC01287-201ENST00000416982 RIMBP3CA6NJZ7 1639 aa13.27□□□□□ -0.29
LINC01287-201ENST00000416982 RIMBP3BA6NNM3 1639 aa13.27□□□□□ -0.29
LINC01287-201ENST00000416982 RIMBP3Q9UFD9 1639 aa13.27□□□□□ -0.29
LINC01287-201ENST00000416982 C8orf34Q49A92 452 aa13.26□□□□□ -0.29
LINC01287-201ENST00000416982 CFAP65Q6ZU64 1925 aaKnown RBP13.26□□□□□ -0.29
LINC01287-201ENST00000416982 GLIPR1L2Q4G1C9 344 aa13.26□□□□□ -0.29
LINC01287-201ENST00000416982 CFAP70Q5T0N1 1121 aa13.26□□□□□ -0.29
LINC01287-201ENST00000416982 FBXO3Q9UK99 471 aa13.26□□□□□ -0.29
LINC01287-201ENST00000416982 YEATS2Q9ULM3 1422 aa13.26□□□□□ -0.29
LINC01287-201ENST00000416982 ADGRF5Q8IZF2 1346 aa13.26□□□□□ -0.29
LINC01287-201ENST00000416982 MLECQ14165 292 aa13.25□□□□□ -0.29
LINC01287-201ENST00000416982 FAM161AQ3B820 660 aa13.25□□□□□ -0.29
LINC01287-201ENST00000416982 RALBP1Q15311 655 aa13.25□□□□□ -0.29
LINC01287-201ENST00000416982 TESK2Q96S53 571 aa13.25□□□□□ -0.29
LINC01287-201ENST00000416982 VIRMAQ69YN4 1812 aaKnown RBP13.24□□□□□ -0.29
LINC01287-201ENST00000416982 PLIN1O60240 522 aa13.24□□□□□ -0.29
LINC01287-201ENST00000416982 PTPRTO14522 1441 aa13.23□□□□□ -0.29
LINC01287-201ENST00000416982 C14orf37Q86TY3 774 aa13.22□□□□□ -0.29
LINC01287-201ENST00000416982 CDCA7LQ96GN5 454 aa13.22□□□□□ -0.29
LINC01287-201ENST00000416982 DISP3Q9P2K9 1392 aa13.22□□□□□ -0.29
LINC01287-201ENST00000416982 ZMYM4Q5VZL5 1548 aa13.22□□□□□ -0.29
LINC01287-201ENST00000416982 ZMYND15Q9H091 742 aa13.22□□□□□ -0.29
LINC01287-201ENST00000416982 INSRP06213 1382 aa13.21□□□□□ -0.29
LINC01287-201ENST00000416982 PRDM15P57071 1507 aaPredicted RBP13.21□□□□□ -0.29
LINC01287-201ENST00000416982 MLH3Q9UHC1 1453 aa13.21□□□□□ -0.29
LINC01287-201ENST00000416982 CENPQQ7L2Z9 268 aaPredicted RBP13.21□□□□□ -0.29
LINC01287-201ENST00000416982 BLMP54132 1417 aaPredicted RBP13.21□□□□□ -0.3
LINC01287-201ENST00000416982 TMEM132AQ24JP5 1023 aa13.21□□□□□ -0.3
LINC01287-201ENST00000416982 FBXO31Q5XUX0 539 aaPredicted RBP13.21□□□□□ -0.3
LINC01287-201ENST00000416982 POGKQ9P215 609 aa13.21□□□□□ -0.3
LINC01287-201ENST00000416982 MROH1Q8NDA8 1641 aa13.21□□□□□ -0.3
LINC01287-201ENST00000416982 NPATQ14207 1427 aa13.2□□□□□ -0.3
LINC01287-201ENST00000416982 TMEM132EQ6IEE7 984 aa13.2□□□□□ -0.3
LINC01287-201ENST00000416982 FRMPD1Q5SYB0 1578 aa13.2□□□□□ -0.3
LINC01287-201ENST00000416982 HAP1P54257 671 aaPredicted RBP13.19□□□□□ -0.3
LINC01287-201ENST00000416982 CC2D1BQ5T0F9 858 aaKnown RBP13.19□□□□□ -0.3
LINC01287-201ENST00000416982 PARD3Q8TEW0 1356 aa13.19□□□□□ -0.3
LINC01287-201ENST00000416982 CLTCL1P53675 1640 aa13.19□□□□□ -0.3
LINC01287-201ENST00000416982 NEO1Q92859 1461 aa13.19□□□□□ -0.3
LINC01287-201ENST00000416982 L1TD1Q5T7N2 865 aaKnown RBP13.18□□□□□ -0.3
LINC01287-201ENST00000416982 VSIG10Q8N0Z9 540 aa13.18□□□□□ -0.3
LINC01287-201ENST00000416982 PANK3Q9H999 370 aa13.18□□□□□ -0.3
LINC01287-201ENST00000416982 TSPOAP1O95153 1857 aa13.18□□□□□ -0.3
LINC01287-201ENST00000416982 NLRP13Q86W25 1043 aa13.18□□□□□ -0.3
LINC01287-201ENST00000416982 DEPDC5O75140 1603 aa13.17□□□□□ -0.3
LINC01287-201ENST00000416982 GPRASP1Q5JY77 1395 aa13.17□□□□□ -0.3
LINC01287-201ENST00000416982 TRPM2O94759 1503 aa13.17□□□□□ -0.3
LINC01287-201ENST00000416982 IDI1Q13907 227 aa13.17□□□□□ -0.3
LINC01287-201ENST00000416982 C20orf194Q5TEA3 1177 aa13.17□□□□□ -0.3
LINC01287-201ENST00000416982 VWDEQ8N2E2 1590 aa13.17□□□□□ -0.3
LINC01287-201ENST00000416982 TRPM1Q7Z4N2 1603 aa13.16□□□□□ -0.3
LINC01287-201ENST00000416982 ABCA6Q8N139 1617 aa13.16□□□□□ -0.3
LINC01287-201ENST00000416982 RRP9O43818 475 aaKnown RBP13.16□□□□□ -0.3
LINC01287-201ENST00000416982 TMF1P82094 1093 aa13.16□□□□□ -0.3
LINC01287-201ENST00000416982 HECW2Q9P2P5 1572 aa13.16□□□□□ -0.3
LINC01287-201ENST00000416982 TRAK1Q9UPV9 953 aa13.16□□□□□ -0.3
LINC01287-201ENST00000416982 TET3O43151 1660 aa13.15□□□□□ -0.3
LINC01287-201ENST00000416982 PPRC1Q5VV67 1664 aaKnown RBP13.15□□□□□ -0.3
LINC01287-201ENST00000416982 PER1O15534 1290 aaPredicted RBP13.14□□□□□ -0.31
LINC01287-201ENST00000416982 USP19O94966 1318 aa13.14□□□□□ -0.31
LINC01287-201ENST00000416982 CLCN1P35523 988 aa13.14□□□□□ -0.31
LINC01287-201ENST00000416982 NOS1P29475 1434 aa13.14□□□□□ -0.31
LINC01287-201ENST00000416982 SPHKAPQ2M3C7 1700 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms