RNA–Protein interactions for RNA: ENST00000416330.1

XIST-201, X inactive specific transcript, humanhuman

TSL 2 BASIC

Gene XIST, Length 750 nt, Biotype lincRNA, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XIST-201ENST00000416330 FAM198AQ9UFP1 575 aa10.16□□□□□ -0.78
XIST-201ENST00000416330 ARIH1Q9Y4X5 557 aaPredicted RBP10.16□□□□□ -0.78
XIST-201ENST00000416330 C3orf80F5H4A9 247 aa10.15□□□□□ -0.78
XIST-201ENST00000416330 PDZRN3Q9UPQ7 1066 aa10.15□□□□□ -0.78
XIST-201ENST00000416330 SLF2Q8IX21 1173 aa10.14□□□□□ -0.79
XIST-201ENST00000416330 ZNF516Q92618 1163 aa10.14□□□□□ -0.79
XIST-201ENST00000416330 CDHR5Q9HBB8 845 aa10.14□□□□□ -0.79
XIST-201ENST00000416330 ZNF787Q6DD87 383 aa10.13□□□□□ -0.79
XIST-201ENST00000416330 RBM27Q9P2N5 1060 aaKnown RBP10.13□□□□□ -0.79
XIST-201ENST00000416330 APLP1P51693 650 aa10.12□□□□□ -0.79
XIST-201ENST00000416330 PRR14Q9BWN1 585 aa10.11□□□□□ -0.79
XIST-201ENST00000416330 COPS2P61201 443 aa10.1□□□□□ -0.79
XIST-201ENST00000416330 LCE2BO14633 110 aa10.09□□□□□ -0.79
XIST-201ENST00000416330 OSBPP22059 807 aa10.09□□□□□ -0.79
XIST-201ENST00000416330 TMUB1Q9BVT8 246 aa10.09□□□□□ -0.79
XIST-201ENST00000416330 SWT1Q5T5J6 900 aaKnown RBP10.08□□□□□ -0.8
XIST-201ENST00000416330 NKX2-3Q8TAU0 364 aa10.08□□□□□ -0.8
XIST-201ENST00000416330 EIF5BO60841 1220 aaKnown RBP10.03□□□□□ -0.8
XIST-201ENST00000416330 ZPR1O75312 459 aa10.03□□□□□ -0.8
XIST-201ENST00000416330 PADI6Q6TGC4 694 aa10.03□□□□□ -0.8
XIST-201ENST00000416330 PCDHB3Q9Y5E6 796 aa10.03□□□□□ -0.8
XIST-201ENST00000416330 PKDCCQ504Y2 493 aa10.01□□□□□ -0.81
XIST-201ENST00000416330 SLC19A1P41440 591 aa10□□□□□ -0.81
XIST-201ENST00000416330 TTC13Q8NBP0 860 aa9.98□□□□□ -0.81
XIST-201ENST00000416330 KCNV2Q8TDN2 545 aa9.98□□□□□ -0.81
XIST-201ENST00000416330 NPDC1Q9NQX5 325 aaPredicted RBP9.98□□□□□ -0.81
XIST-201ENST00000416330 MLLT3P42568 568 aaPredicted RBP9.97□□□□□ -0.81
XIST-201ENST00000416330 KMT5BQ4FZB7 885 aa9.96□□□□□ -0.82
XIST-201ENST00000416330 RNF223E7ERA6 249 aa9.95□□□□□ -0.82
XIST-201ENST00000416330 ZNF775Q96BV0 537 aaPredicted RBP9.95□□□□□ -0.82
XIST-201ENST00000416330 EYA1Q99502 592 aa9.95□□□□□ -0.82
XIST-201ENST00000416330 DGAT1O75907 488 aa9.94□□□□□ -0.82
XIST-201ENST00000416330 BLOC1S3Q6QNY0 202 aa9.94□□□□□ -0.82
XIST-201ENST00000416330 RBM46Q8TBY0 533 aaKnown RBP9.94□□□□□ -0.82
XIST-201ENST00000416330 ARHGEF1Q92888 912 aaKnown RBP9.94□□□□□ -0.82
XIST-201ENST00000416330 DNAJB2P25686 324 aa9.93□□□□□ -0.82
XIST-201ENST00000416330 LOC105371045A0A1W2PR82 267 aa9.92□□□□□ -0.82
XIST-201ENST00000416330 SPRYD7Q5W111 196 aa9.92□□□□□ -0.82
XIST-201ENST00000416330 ZNF598Q86UK7 904 aaKnown RBP9.92□□□□□ -0.82
XIST-201ENST00000416330 ANKLE1Q8NAG6 615 aa9.91□□□□□ -0.82
XIST-201ENST00000416330 BRPF1P55201 1214 aaPredicted RBP9.89□□□□□ -0.83
XIST-201ENST00000416330 ZNF697Q5TEC3 545 aa9.89□□□□□ -0.83
XIST-201ENST00000416330 NR1I2O75469 434 aa9.88□□□□□ -0.83
XIST-201ENST00000416330 PRR20EP86478 221 aa9.88□□□□□ -0.83
XIST-201ENST00000416330 PRR20CP86479 221 aa9.88□□□□□ -0.83
XIST-201ENST00000416330 PRR20DP86480 221 aa9.88□□□□□ -0.83
XIST-201ENST00000416330 PRR20BP86481 221 aa9.88□□□□□ -0.83
XIST-201ENST00000416330 PRR20AP86496 221 aa9.88□□□□□ -0.83
XIST-201ENST00000416330 FAM187AA6NFU0 413 aa9.87□□□□□ -0.83
XIST-201ENST00000416330 ACTN4O43707 911 aaKnown RBP9.87□□□□□ -0.83
XIST-201ENST00000416330 TLL1O43897 1013 aa9.87□□□□□ -0.83
XIST-201ENST00000416330 S1PR4O95977 384 aa9.87□□□□□ -0.83
XIST-201ENST00000416330 TRIM67Q6ZTA4 783 aa9.87□□□□□ -0.83
XIST-201ENST00000416330 CCDC9Q9Y3X0 531 aaKnown RBP9.87□□□□□ -0.83
XIST-201ENST00000416330 PTGDRQ13258 359 aa9.86□□□□□ -0.83
XIST-201ENST00000416330 FAM161AQ3B820 660 aa9.86□□□□□ -0.83
XIST-201ENST00000416330 TMEM134Q9H6X4 195 aa9.86□□□□□ -0.83
XIST-201ENST00000416330 PPEF1O14829 653 aaPredicted RBP9.85□□□□□ -0.83
XIST-201ENST00000416330 CFHP08603 1231 aa9.85□□□□□ -0.83
XIST-201ENST00000416330 RSPH4AQ5TD94 716 aa9.85□□□□□ -0.83
XIST-201ENST00000416330 NUTM2FA1L443 756 aa9.83□□□□□ -0.84
XIST-201ENST00000416330 TNFRSF10AO00220 468 aa9.83□□□□□ -0.84
XIST-201ENST00000416330 ADH1BP00325 375 aa9.83□□□□□ -0.84
XIST-201ENST00000416330 SLC6A16Q9GZN6 736 aa9.83□□□□□ -0.84
XIST-201ENST00000416330 RCCD1A6NED2 376 aa9.82□□□□□ -0.84
XIST-201ENST00000416330 LIAT1Q6ZQX7 453 aa9.82□□□□□ -0.84
XIST-201ENST00000416330 P3H3Q8IVL6 736 aa9.82□□□□□ -0.84
XIST-201ENST00000416330 ADGRG1Q9Y653 693 aa9.82□□□□□ -0.84
XIST-201ENST00000416330 SEMA3EO15041 775 aa9.8□□□□□ -0.84
XIST-201ENST00000416330 EMID1Q96A84 441 aaPredicted RBP9.8□□□□□ -0.84
XIST-201ENST00000416330 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.78□□□□□ -0.84
XIST-201ENST00000416330 GDF9O60383 454 aa9.78□□□□□ -0.84
XIST-201ENST00000416330 ARID3AQ99856 593 aa9.78□□□□□ -0.84
XIST-201ENST00000416330 FOXC1Q12948 553 aa9.77□□□□□ -0.85
XIST-201ENST00000416330 ZBTB7CA1YPR0 619 aa9.76□□□□□ -0.85
XIST-201ENST00000416330 POTECB2RU33 542 aa9.76□□□□□ -0.85
XIST-201ENST00000416330 FCHSD2O94868 740 aa9.76□□□□□ -0.85
XIST-201ENST00000416330 OATP04181 439 aa9.76□□□□□ -0.85
XIST-201ENST00000416330 LMOD2Q6P5Q4 547 aa9.76□□□□□ -0.85
XIST-201ENST00000416330 SCUBE3Q8IX30 993 aa9.76□□□□□ -0.85
XIST-201ENST00000416330 SPSB2Q99619 263 aa9.75□□□□□ -0.85
XIST-201ENST00000416330 CD2BP2O95400 341 aaKnown RBP9.74□□□□□ -0.85
XIST-201ENST00000416330 ZMYND15Q9H091 742 aa9.74□□□□□ -0.85
XIST-201ENST00000416330 RSPH6AQ9H0K4 717 aa9.74□□□□□ -0.85
XIST-201ENST00000416330 AAASQ9NRG9 546 aa9.74□□□□□ -0.85
XIST-201ENST00000416330 ST8SIA5O15466 376 aa9.73□□□□□ -0.85
XIST-201ENST00000416330 SLC10A3P09131 477 aa9.73□□□□□ -0.85
XIST-201ENST00000416330 TREML4Q6UXN2 200 aa9.73□□□□□ -0.85
XIST-201ENST00000416330 RPIAP49247 311 aa9.71□□□□□ -0.86
XIST-201ENST00000416330 NEUROD2Q15784 382 aa9.71□□□□□ -0.86
XIST-201ENST00000416330 CYP4X1Q8N118 509 aa9.71□□□□□ -0.86
XIST-201ENST00000416330 PUS10Q3MIT2 529 aaKnown RBP9.7□□□□□ -0.86
XIST-201ENST00000416330 IGSF3O75054 1194 aa9.69□□□□□ -0.86
XIST-201ENST00000416330 PLA2G2CQ5R387 149 aa9.69□□□□□ -0.86
XIST-201ENST00000416330 RBM26Q5T8P6 1007 aaKnown RBP9.69□□□□□ -0.86
XIST-201ENST00000416330 PXYLP1Q8TE99 480 aa9.69□□□□□ -0.86
XIST-201ENST00000416330 TESPA1A2RU30 521 aaPredicted RBP9.68□□□□□ -0.86
XIST-201ENST00000416330 RDH13Q8NBN7 331 aa9.68□□□□□ -0.86
XIST-201ENST00000416330 C11orf95C9JLR9 678 aaPredicted RBP9.67□□□□□ -0.86
XIST-201ENST00000416330 AXIN1O15169 862 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms