RNA–Protein interactions for RNA: ENST00000416319.5

FAM3A-207, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-207ENST00000416319 RIMS2Q9UQ26 1411 aa28.95■■■□□ 2.23
FAM3A-207ENST00000416319 STRCQ7RTU9 1775 aa28.95■■■□□ 2.22
FAM3A-207ENST00000416319 RPGRIP1LQ68CZ1 1315 aa28.94■■■□□ 2.22
FAM3A-207ENST00000416319 ZNF326Q5BKZ1 582 aaKnown RBP28.92■■■□□ 2.22
FAM3A-207ENST00000416319 KIF1BO60333 1816 aa28.91■■■□□ 2.22
FAM3A-207ENST00000416319 NPHP4O75161 1426 aaPredicted RBP28.89■■■□□ 2.22
FAM3A-207ENST00000416319 POLR1AO95602 1720 aaPredicted RBP28.86■■■□□ 2.21
FAM3A-207ENST00000416319 MYO5BQ9ULV0 1848 aa28.86■■■□□ 2.21
FAM3A-207ENST00000416319 PLEKHG1Q9ULL1 1385 aa28.86■■■□□ 2.21
FAM3A-207ENST00000416319 PPP1R15AO75807 674 aaPredicted RBP28.85■■■□□ 2.21
FAM3A-207ENST00000416319 NEXMIFQ5QGS0 1516 aa28.84■■■□□ 2.21
FAM3A-207ENST00000416319 RGL3Q3MIN7 710 aa28.83■■■□□ 2.21
FAM3A-207ENST00000416319 VGFO15240 615 aaPredicted RBP28.82■■■□□ 2.2
FAM3A-207ENST00000416319 CLSPNQ9HAW4 1339 aa28.79■■■□□ 2.2
FAM3A-207ENST00000416319 IQGAP1P46940 1657 aa28.78■■■□□ 2.2
FAM3A-207ENST00000416319 STAC3Q96MF2 364 aa28.78■■■□□ 2.2
FAM3A-207ENST00000416319 NUTM2DQ5VT03 806 aaPredicted RBP28.77■■■□□ 2.2
FAM3A-207ENST00000416319 SIN3AQ96ST3 1273 aa28.75■■■□□ 2.19
FAM3A-207ENST00000416319 TBX22Q9Y458 520 aa28.72■■■□□ 2.19
FAM3A-207ENST00000416319 MYOM2P54296 1465 aa28.72■■■□□ 2.19
FAM3A-207ENST00000416319 SETBP1Q9Y6X0 1596 aa28.71■■■□□ 2.19
FAM3A-207ENST00000416319 PPLO60437 1756 aa28.71■■■□□ 2.19
FAM3A-207ENST00000416319 BCANQ96GW7 911 aa28.71■■■□□ 2.19
FAM3A-207ENST00000416319 ADAMTS13Q76LX8 1427 aa28.7■■■□□ 2.19
FAM3A-207ENST00000416319 ADGRF5Q8IZF2 1346 aa28.69■■■□□ 2.18
FAM3A-207ENST00000416319 NRXN1Q9ULB1 1477 aa28.68■■■□□ 2.18
FAM3A-207ENST00000416319 NEUROD1Q13562 356 aa28.68■■■□□ 2.18
FAM3A-207ENST00000416319 SLC26A8Q96RN1 970 aa28.68■■■□□ 2.18
FAM3A-207ENST00000416319 DIP2AQ14689 1571 aa28.67■■■□□ 2.18
FAM3A-207ENST00000416319 IFT172Q9UG01 1749 aa28.67■■■□□ 2.18
FAM3A-207ENST00000416319 DCAF11Q8TEB1 546 aa28.66■■■□□ 2.18
FAM3A-207ENST00000416319 PIK3R4Q99570 1358 aa28.65■■■□□ 2.18
FAM3A-207ENST00000416319 PIK3C2GO75747 1445 aa28.65■■■□□ 2.18
FAM3A-207ENST00000416319 CCER1Q8TC90 406 aaPredicted RBP28.64■■■□□ 2.18
FAM3A-207ENST00000416319 NRXN3Q9Y4C0 1643 aa28.63■■■□□ 2.17
FAM3A-207ENST00000416319 ZNF335Q9H4Z2 1342 aaPredicted RBP28.62■■■□□ 2.17
FAM3A-207ENST00000416319 L3MBTL2Q969R5 705 aa28.61■■■□□ 2.17
FAM3A-207ENST00000416319 KCNA6P17658 529 aa28.59■■■□□ 2.17
FAM3A-207ENST00000416319 SENP3Q9H4L4 574 aaPredicted RBP28.58■■■□□ 2.17
FAM3A-207ENST00000416319 KDM2AQ9Y2K7 1162 aa28.58■■■□□ 2.17
FAM3A-207ENST00000416319 C14orf93Q9H972 538 aaKnown RBP28.57■■■□□ 2.16
FAM3A-207ENST00000416319 ALKQ9UM73 1620 aa28.57■■■□□ 2.16
FAM3A-207ENST00000416319 TONSLQ96HA7 1378 aa28.56■■■□□ 2.16
FAM3A-207ENST00000416319 LTBP4Q8N2S1 1624 aa28.55■■■□□ 2.16
FAM3A-207ENST00000416319 METP08581 1390 aa28.55■■■□□ 2.16
FAM3A-207ENST00000416319 TIMELESSQ9UNS1 1208 aa28.55■■■□□ 2.16
FAM3A-207ENST00000416319 CPS1P31327 1500 aa28.53■■■□□ 2.16
FAM3A-207ENST00000416319 NWD1Q149M9 1564 aa28.51■■■□□ 2.15
FAM3A-207ENST00000416319 PRAG1Q86YV5 1406 aa28.51■■■□□ 2.15
FAM3A-207ENST00000416319 NKTRP30414 1462 aaKnown RBP28.49■■■□□ 2.15
FAM3A-207ENST00000416319 PTPRUQ92729 1446 aa28.49■■■□□ 2.15
FAM3A-207ENST00000416319 CFAP70Q5T0N1 1121 aa28.48■■■□□ 2.15
FAM3A-207ENST00000416319 SETD1AO15047 1707 aaKnown RBP28.48■■■□□ 2.15
FAM3A-207ENST00000416319 AMOTL2Q9Y2J4 779 aa28.47■■■□□ 2.15
FAM3A-207ENST00000416319 LAMC1P11047 1609 aa28.47■■■□□ 2.15
FAM3A-207ENST00000416319 CHD2O14647 1828 aaKnown RBP28.44■■■□□ 2.14
FAM3A-207ENST00000416319 LRPPRCP42704 1394 aaKnown RBP28.42■■■□□ 2.14
FAM3A-207ENST00000416319 CERKQ8TCT0 537 aa28.42■■■□□ 2.14
FAM3A-207ENST00000416319 ASXL1Q8IXJ9 1541 aa28.42■■■□□ 2.14
FAM3A-207ENST00000416319 LRRC7Q96NW7 1537 aa28.42■■■□□ 2.14
FAM3A-207ENST00000416319 STRCP1A6NGW2 1772 aa28.42■■■□□ 2.14
FAM3A-207ENST00000416319 IQSEC2Q5JU85 1478 aa28.41■■■□□ 2.14
FAM3A-207ENST00000416319 XRN1Q8IZH2 1706 aaKnown RBP28.4■■■□□ 2.14
FAM3A-207ENST00000416319 ABCC11Q96J66 1382 aa28.4■■■□□ 2.14
FAM3A-207ENST00000416319 TMEM132EQ6IEE7 984 aa28.4■■■□□ 2.14
FAM3A-207ENST00000416319 TECPR2O15040 1411 aa28.4■■■□□ 2.14
FAM3A-207ENST00000416319 PTCH1Q13635 1447 aa28.4■■■□□ 2.14
FAM3A-207ENST00000416319 ADGRB1O14514 1584 aa28.4■■■□□ 2.14
FAM3A-207ENST00000416319 NCOA3Q9Y6Q9 1424 aa28.39■■■□□ 2.14
FAM3A-207ENST00000416319 YTHDC2Q9H6S0 1430 aaKnown RBP28.38■■■□□ 2.13
FAM3A-207ENST00000416319 PROSER2Q86WR7 435 aaPredicted RBP28.38■■■□□ 2.13
FAM3A-207ENST00000416319 KIAA1210Q9ULL0 1709 aa28.37■■■□□ 2.13
FAM3A-207ENST00000416319 SIRT1Q96EB6 747 aa28.36■■■□□ 2.13
FAM3A-207ENST00000416319 TMEM94Q12767 1356 aa28.36■■■□□ 2.13
FAM3A-207ENST00000416319 NBPF8Q3BBV2 869 aa28.34■■■□□ 2.13
FAM3A-207ENST00000416319 ROBO2Q9HCK4 1378 aa28.33■■■□□ 2.13
FAM3A-207ENST00000416319 NBPF1Q3BBV0 1214 aa28.31■■■□□ 2.12
FAM3A-207ENST00000416319 STK26Q9P289 416 aa28.31■■■□□ 2.12
FAM3A-207ENST00000416319 FAM135BQ49AJ0 1406 aa28.3■■■□□ 2.12
FAM3A-207ENST00000416319 DLC1Q96QB1 1528 aa28.28■■■□□ 2.12
FAM3A-207ENST00000416319 GPRASP1Q5JY77 1395 aa28.27■■■□□ 2.12
FAM3A-207ENST00000416319 KNDC1Q76NI1 1749 aa28.26■■■□□ 2.12
FAM3A-207ENST00000416319 TRPM1Q7Z4N2 1603 aa28.26■■■□□ 2.11
FAM3A-207ENST00000416319 RALGAPBQ86X10 1494 aa28.26■■■□□ 2.11
FAM3A-207ENST00000416319 ROCK2O75116 1388 aaKnown RBP28.25■■■□□ 2.11
FAM3A-207ENST00000416319 RBM33Q96EV2 1170 aaKnown RBP28.24■■■□□ 2.11
FAM3A-207ENST00000416319 C19orf44Q9H6X5 657 aa28.23■■■□□ 2.11
FAM3A-207ENST00000416319 TRAK1Q9UPV9 953 aa28.23■■■□□ 2.11
FAM3A-207ENST00000416319 MSH6P52701 1360 aa28.23■■■□□ 2.11
FAM3A-207ENST00000416319 ADGRL3Q9HAR2 1447 aa28.2■■■□□ 2.11
FAM3A-207ENST00000416319 WAPLQ7Z5K2 1190 aa28.2■■■□□ 2.1
FAM3A-207ENST00000416319 DCCP43146 1447 aa28.19■■■□□ 2.1
FAM3A-207ENST00000416319 C14orf37Q86TY3 774 aa28.19■■■□□ 2.1
FAM3A-207ENST00000416319 PRAM1Q96QH2 718 aa28.19■■■□□ 2.1
FAM3A-207ENST00000416319 XIRP1Q702N8 1843 aaKnown RBP28.19■■■□□ 2.1
FAM3A-207ENST00000416319 PLEKHH1Q9ULM0 1364 aa28.18■■■□□ 2.1
FAM3A-207ENST00000416319 POGKQ9P215 609 aa28.17■■■□□ 2.1
FAM3A-207ENST00000416319 TOM1O60784 492 aa28.16■■■□□ 2.1
FAM3A-207ENST00000416319 CARD11Q9BXL7 1154 aa28.16■■■□□ 2.1
FAM3A-207ENST00000416319 CADPS2Q86UW7 1296 aa28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms