RNA–Protein interactions for RNA: ENST00000415670.1

CDC42EP1-202, Transcript of CDC42 effector protein 1, humanhuman

APPRIS ALT2 TSL 3

Gene CDC42EP1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-202ENST00000415670 LMTK2Q8IWU2 1503 aa25.58■■□□□ 1.68
CDC42EP1-202ENST00000415670 MSH6P52701 1360 aa25.57■■□□□ 1.68
CDC42EP1-202ENST00000415670 ADGRB3O60242 1522 aa25.57■■□□□ 1.68
CDC42EP1-202ENST00000415670 LRP6O75581 1613 aa25.56■■□□□ 1.68
CDC42EP1-202ENST00000415670 JCADQ9P266 1359 aa25.55■■□□□ 1.68
CDC42EP1-202ENST00000415670 CHD2O14647 1828 aaKnown RBP25.54■■□□□ 1.68
CDC42EP1-202ENST00000415670 NKTRP30414 1462 aaKnown RBP25.53■■□□□ 1.68
CDC42EP1-202ENST00000415670 TRIM52Q96A61 297 aa25.53■■□□□ 1.68
CDC42EP1-202ENST00000415670 COL16A1Q07092 1604 aaPredicted RBP25.52■■□□□ 1.68
CDC42EP1-202ENST00000415670 ZFYVE9O95405 1425 aa25.52■■□□□ 1.68
CDC42EP1-202ENST00000415670 UPF1Q92900 1129 aaKnown RBP eCLIP25.51■■□□□ 1.67
CDC42EP1-202ENST00000415670 ANKRD30AQ9BXX3 1397 aa25.51■■□□□ 1.67
CDC42EP1-202ENST00000415670 FGD6Q6ZV73 1430 aa25.51■■□□□ 1.67
CDC42EP1-202ENST00000415670 RIMS2Q9UQ26 1411 aa25.49■■□□□ 1.67
CDC42EP1-202ENST00000415670 SLC52A1Q9NWF4 448 aa25.49■■□□□ 1.67
CDC42EP1-202ENST00000415670 PLEKHG1Q9ULL1 1385 aa25.47■■□□□ 1.67
CDC42EP1-202ENST00000415670 GCC2Q8IWJ2 1684 aa25.46■■□□□ 1.67
CDC42EP1-202ENST00000415670 PPP1R15AO75807 674 aaPredicted RBP25.46■■□□□ 1.67
CDC42EP1-202ENST00000415670 CHGAP10645 457 aaKnown RBP25.46■■□□□ 1.67
CDC42EP1-202ENST00000415670 PPARGC1BQ86YN6 1023 aaKnown RBP25.46■■□□□ 1.67
CDC42EP1-202ENST00000415670 MEX3CQ5U5Q3 659 aaKnown RBP25.45■■□□□ 1.66
CDC42EP1-202ENST00000415670 C14orf37Q86TY3 774 aa25.45■■□□□ 1.66
CDC42EP1-202ENST00000415670 TMEM131LA2VDJ0 1609 aa25.44■■□□□ 1.66
CDC42EP1-202ENST00000415670 NUTM2BA6NNL0 878 aaPredicted RBP25.43■■□□□ 1.66
CDC42EP1-202ENST00000415670 NUTM2EB1AL46 878 aaPredicted RBP25.43■■□□□ 1.66
CDC42EP1-202ENST00000415670 NUTM2AQ8IVF1 878 aaPredicted RBP25.43■■□□□ 1.66
CDC42EP1-202ENST00000415670 TBX22Q9Y458 520 aa25.43■■□□□ 1.66
CDC42EP1-202ENST00000415670 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.43■■□□□ 1.66
CDC42EP1-202ENST00000415670 ADAMTS13Q76LX8 1427 aa25.41■■□□□ 1.66
CDC42EP1-202ENST00000415670 FAM50AQ14320 339 aaKnown RBP25.4■■□□□ 1.66
CDC42EP1-202ENST00000415670 SPATA31A6Q5VVP1 1343 aa25.37■■□□□ 1.65
CDC42EP1-202ENST00000415670 PTPRUQ92729 1446 aa25.37■■□□□ 1.65
CDC42EP1-202ENST00000415670 ZNF772Q68DY9 489 aaPredicted RBP25.36■■□□□ 1.65
CDC42EP1-202ENST00000415670 BRINP3Q76B58 766 aa25.36■■□□□ 1.65
CDC42EP1-202ENST00000415670 C19orf44Q9H6X5 657 aa25.36■■□□□ 1.65
CDC42EP1-202ENST00000415670 ANKRD50Q9ULJ7 1429 aa25.36■■□□□ 1.65
CDC42EP1-202ENST00000415670 ADGRL2O95490 1459 aa25.35■■□□□ 1.65
CDC42EP1-202ENST00000415670 ATF3P18847 181 aa25.35■■□□□ 1.65
CDC42EP1-202ENST00000415670 DDX17Q92841 729 aaKnown RBP25.35■■□□□ 1.65
CDC42EP1-202ENST00000415670 AMOTL2Q9Y2J4 779 aa25.34■■□□□ 1.65
CDC42EP1-202ENST00000415670 AHDC1Q5TGY3 1603 aaPredicted RBP25.34■■□□□ 1.65
CDC42EP1-202ENST00000415670 RXRBP28702 533 aa25.33■■□□□ 1.65
CDC42EP1-202ENST00000415670 RPRD2Q5VT52 1461 aaKnown RBP25.33■■□□□ 1.65
CDC42EP1-202ENST00000415670 SHPRHQ149N8 1683 aa25.32■■□□□ 1.64
CDC42EP1-202ENST00000415670 DIP2AQ14689 1571 aa25.32■■□□□ 1.64
CDC42EP1-202ENST00000415670 CADPS2Q86UW7 1296 aa25.32■■□□□ 1.64
CDC42EP1-202ENST00000415670 HDGFP51858 240 aaKnown RBP25.31■■□□□ 1.64
CDC42EP1-202ENST00000415670 E9PCH4 1651 aa25.3■■□□□ 1.64
CDC42EP1-202ENST00000415670 AFF2P51816 1311 aa25.3■■□□□ 1.64
CDC42EP1-202ENST00000415670 NCOA3Q9Y6Q9 1424 aa25.29■■□□□ 1.64
CDC42EP1-202ENST00000415670 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.29■■□□□ 1.64
CDC42EP1-202ENST00000415670 SRCAPQ6ZRS2 3230 aa25.25■■□□□ 1.63
CDC42EP1-202ENST00000415670 C8orf37Q96NL8 207 aa25.21■■□□□ 1.63
CDC42EP1-202ENST00000415670 UNC13BO14795 1591 aa25.21■■□□□ 1.63
CDC42EP1-202ENST00000415670 ASXL1Q8IXJ9 1541 aa25.21■■□□□ 1.63
CDC42EP1-202ENST00000415670 QTRT2Q9H974 415 aaKnown RBP25.2■■□□□ 1.62
CDC42EP1-202ENST00000415670 MST1RQ04912 1400 aa25.2■■□□□ 1.62
CDC42EP1-202ENST00000415670 PIK3R4Q99570 1358 aa25.19■■□□□ 1.62
CDC42EP1-202ENST00000415670 NRXN3Q9Y4C0 1643 aa25.19■■□□□ 1.62
CDC42EP1-202ENST00000415670 METP08581 1390 aa25.18■■□□□ 1.62
CDC42EP1-202ENST00000415670 TRPM2O94759 1503 aa25.18■■□□□ 1.62
CDC42EP1-202ENST00000415670 RGS12O14924 1447 aa25.18■■□□□ 1.62
CDC42EP1-202ENST00000415670 RRBP1Q9P2E9 1410 aaKnown RBP25.17■■□□□ 1.62
CDC42EP1-202ENST00000415670 SETD5Q9C0A6 1442 aa25.16■■□□□ 1.62
CDC42EP1-202ENST00000415670 ADAMTS2O95450 1211 aa25.14■■□□□ 1.62
CDC42EP1-202ENST00000415670 NHSL1Q5SYE7 1610 aa25.14■■□□□ 1.61
CDC42EP1-202ENST00000415670 XRN1Q8IZH2 1706 aaKnown RBP25.14■■□□□ 1.61
CDC42EP1-202ENST00000415670 CDK12Q9NYV4 1490 aaPredicted RBP25.14■■□□□ 1.61
CDC42EP1-202ENST00000415670 NUP155O75694 1391 aa25.13■■□□□ 1.61
CDC42EP1-202ENST00000415670 PNPLA6Q8IY17 1366 aa25.13■■□□□ 1.61
CDC42EP1-202ENST00000415670 ITGAEP38570 1179 aa25.12■■□□□ 1.61
CDC42EP1-202ENST00000415670 LRRC59Q96AG4 307 aaKnown RBP25.12■■□□□ 1.61
CDC42EP1-202ENST00000415670 IQGAP3Q86VI3 1631 aa25.12■■□□□ 1.61
CDC42EP1-202ENST00000415670 RBM6P78332 1123 aaKnown RBP25.1■■□□□ 1.61
CDC42EP1-202ENST00000415670 ZNF326Q5BKZ1 582 aaKnown RBP25.09■■□□□ 1.61
CDC42EP1-202ENST00000415670 DCCP43146 1447 aa25.08■■□□□ 1.61
CDC42EP1-202ENST00000415670 NGLY1Q96IV0 654 aa25.07■■□□□ 1.6
CDC42EP1-202ENST00000415670 ORAI2Q96SN7 254 aa25.06■■□□□ 1.6
CDC42EP1-202ENST00000415670 NALCNQ8IZF0 1738 aa25.06■■□□□ 1.6
CDC42EP1-202ENST00000415670 SETBP1Q9Y6X0 1596 aa25.05■■□□□ 1.6
CDC42EP1-202ENST00000415670 ADGRL3Q9HAR2 1447 aa25.02■■□□□ 1.6
CDC42EP1-202ENST00000415670 ROCK1Q13464 1354 aa25.01■■□□□ 1.59
CDC42EP1-202ENST00000415670 C1orf167Q5SNV9 1468 aa25.01■■□□□ 1.59
CDC42EP1-202ENST00000415670 TRIM26Q12899 539 aaPredicted RBP25■■□□□ 1.59
CDC42EP1-202ENST00000415670 SPHKAPQ2M3C7 1700 aa24.98■■□□□ 1.59
CDC42EP1-202ENST00000415670 USP21Q9UK80 565 aa24.98■■□□□ 1.59
CDC42EP1-202ENST00000415670 EP400Q96L91 3159 aa24.96■■□□□ 1.59
CDC42EP1-202ENST00000415670 NEXMIFQ5QGS0 1516 aa24.96■■□□□ 1.59
CDC42EP1-202ENST00000415670 ROBO2Q9HCK4 1378 aa24.95■■□□□ 1.59
CDC42EP1-202ENST00000415670 CLTCL1P53675 1640 aa24.95■■□□□ 1.58
CDC42EP1-202ENST00000415670 SOS2Q07890 1332 aaPredicted RBP24.94■■□□□ 1.58
CDC42EP1-202ENST00000415670 XPCQ01831 940 aaPredicted RBP24.91■■□□□ 1.58
CDC42EP1-202ENST00000415670 FNBP4Q8N3X1 1017 aaPredicted RBP24.9■■□□□ 1.58
CDC42EP1-202ENST00000415670 ATAD2Q6PL18 1390 aa24.9■■□□□ 1.58
CDC42EP1-202ENST00000415670 TRPC5Q9UL62 973 aaPredicted RBP24.89■■□□□ 1.58
CDC42EP1-202ENST00000415670 LAMC1P11047 1609 aa24.88■■□□□ 1.57
CDC42EP1-202ENST00000415670 ATRNO75882 1429 aa24.87■■□□□ 1.57
CDC42EP1-202ENST00000415670 BCL9LQ86UU0 1499 aa24.83■■□□□ 1.57
CDC42EP1-202ENST00000415670 NUTM2FA1L443 756 aa24.83■■□□□ 1.57
CDC42EP1-202ENST00000415670 ZRANB1Q9UGI0 708 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms