RNA–Protein interactions for RNA: ENST00000415609.6

UBA3-203, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 5 BASIC

Gene UBA3, Length 2,004 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-203ENST00000415609 MROH2AA6NES4 1674 aa16.61■□□□□ 0.25
UBA3-203ENST00000415609 CDCA8Q53HL2 280 aa16.61■□□□□ 0.25
UBA3-203ENST00000415609 ABCA6Q8N139 1617 aa16.61■□□□□ 0.25
UBA3-203ENST00000415609 MLH3Q9UHC1 1453 aa16.61■□□□□ 0.25
UBA3-203ENST00000415609 SYNMO15061 1565 aa16.6■□□□□ 0.25
UBA3-203ENST00000415609 FRMPD1Q5SYB0 1578 aa16.6■□□□□ 0.25
UBA3-203ENST00000415609 IFT172Q9UG01 1749 aa16.6■□□□□ 0.25
UBA3-203ENST00000415609 B4GALNT3Q6L9W6 998 aa16.58■□□□□ 0.24
UBA3-203ENST00000415609 RBM19Q9Y4C8 960 aaKnown RBP16.58■□□□□ 0.24
UBA3-203ENST00000415609 CFAP70Q5T0N1 1121 aa16.57■□□□□ 0.24
UBA3-203ENST00000415609 KNSTRNQ9Y448 316 aa16.57■□□□□ 0.24
UBA3-203ENST00000415609 ADGRF5Q8IZF2 1346 aa16.57■□□□□ 0.24
UBA3-203ENST00000415609 GGT6Q6P531 493 aa16.57■□□□□ 0.24
UBA3-203ENST00000415609 RNF123Q5XPI4 1314 aa16.56■□□□□ 0.24
UBA3-203ENST00000415609 SALL2Q9Y467 1007 aaPredicted RBP16.56■□□□□ 0.24
UBA3-203ENST00000415609 KDM5AP29375 1690 aaKnown RBP16.56■□□□□ 0.24
UBA3-203ENST00000415609 ADGRB3O60242 1522 aa16.56■□□□□ 0.24
UBA3-203ENST00000415609 MYOM1P52179 1685 aa16.55■□□□□ 0.24
UBA3-203ENST00000415609 CHGAP10645 457 aaKnown RBP16.55■□□□□ 0.24
UBA3-203ENST00000415609 NPATQ14207 1427 aa16.55■□□□□ 0.24
UBA3-203ENST00000415609 NEO1Q92859 1461 aa16.55■□□□□ 0.24
UBA3-203ENST00000415609 ZMYM4Q5VZL5 1548 aa16.53■□□□□ 0.24
UBA3-203ENST00000415609 NRXN1Q9ULB1 1477 aa16.53■□□□□ 0.24
UBA3-203ENST00000415609 NOS1P29475 1434 aa16.53■□□□□ 0.24
UBA3-203ENST00000415609 BLMP54132 1417 aaPredicted RBP16.53■□□□□ 0.24
UBA3-203ENST00000415609 ABCC3O15438 1527 aa16.52■□□□□ 0.24
UBA3-203ENST00000415609 ASXL1Q8IXJ9 1541 aa16.52■□□□□ 0.23
UBA3-203ENST00000415609 CFAP65Q6ZU64 1925 aaKnown RBP16.52■□□□□ 0.23
UBA3-203ENST00000415609 INSRP06213 1382 aa16.52■□□□□ 0.23
UBA3-203ENST00000415609 RAPGEF3O95398 923 aa16.51■□□□□ 0.23
UBA3-203ENST00000415609 PDE3BQ13370 1112 aa16.51■□□□□ 0.23
UBA3-203ENST00000415609 AMER1Q5JTC6 1135 aaPredicted RBP16.51■□□□□ 0.23
UBA3-203ENST00000415609 CAMSAP1Q5T5Y3 1602 aa16.5■□□□□ 0.23
UBA3-203ENST00000415609 ERVK-7P63135 1459 aa16.5■□□□□ 0.23
UBA3-203ENST00000415609 SLC24A1O60721 1099 aa16.5■□□□□ 0.23
UBA3-203ENST00000415609 PPLO60437 1756 aa16.49■□□□□ 0.23
UBA3-203ENST00000415609 PPP2R1AP30153 589 aa16.49■□□□□ 0.23
UBA3-203ENST00000415609 DIP2CQ9Y2E4 1556 aa16.49■□□□□ 0.23
UBA3-203ENST00000415609 MYO3AQ8NEV4 1616 aa16.49■□□□□ 0.23
UBA3-203ENST00000415609 SETBP1Q9Y6X0 1596 aa16.48■□□□□ 0.23
UBA3-203ENST00000415609 AEBP2Q6ZN18 517 aaPredicted RBP16.48■□□□□ 0.23
UBA3-203ENST00000415609 RCAN3Q9UKA8 241 aa16.46■□□□□ 0.23
UBA3-203ENST00000415609 PIK3C2GO75747 1445 aa16.46■□□□□ 0.23
UBA3-203ENST00000415609 RICTORQ6R327 1708 aa16.46■□□□□ 0.23
UBA3-203ENST00000415609 CCDC136Q96JN2 1154 aa16.46■□□□□ 0.23
UBA3-203ENST00000415609 NPC1L1Q9UHC9 1359 aa16.45■□□□□ 0.22
UBA3-203ENST00000415609 RRP1P56182 461 aaKnown RBP16.45■□□□□ 0.22
UBA3-203ENST00000415609 WDR43Q15061 677 aaKnown RBP eCLIP16.45■□□□□ 0.22
UBA3-203ENST00000415609 SIGLEC1Q9BZZ2 1709 aa16.45■□□□□ 0.22
UBA3-203ENST00000415609 CDCA7LQ96GN5 454 aa16.45■□□□□ 0.22
UBA3-203ENST00000415609 ADAMTS8Q9UP79 889 aa16.45■□□□□ 0.22
UBA3-203ENST00000415609 CENPJQ9HC77 1338 aaPredicted RBP16.44■□□□□ 0.22
UBA3-203ENST00000415609 SBNO2Q9Y2G9 1366 aa16.44■□□□□ 0.22
UBA3-203ENST00000415609 RPGRIP1LQ68CZ1 1315 aa16.43■□□□□ 0.22
UBA3-203ENST00000415609 C14orf93Q9H972 538 aaKnown RBP16.42■□□□□ 0.22
UBA3-203ENST00000415609 TRAK1Q9UPV9 953 aa16.42■□□□□ 0.22
UBA3-203ENST00000415609 ZC3H13Q5T200 1668 aaKnown RBP16.42■□□□□ 0.22
UBA3-203ENST00000415609 QRICH2Q9H0J4 1663 aa16.42■□□□□ 0.22
UBA3-203ENST00000415609 PIK3C2BO00750 1634 aa16.42■□□□□ 0.22
UBA3-203ENST00000415609 MYT1Q01538 1121 aa16.41■□□□□ 0.22
UBA3-203ENST00000415609 ADGRB1O14514 1584 aa16.41■□□□□ 0.22
UBA3-203ENST00000415609 YEATS2Q9ULM3 1422 aa16.4■□□□□ 0.22
UBA3-203ENST00000415609 CYB5RLQ6IPT4 315 aa16.39■□□□□ 0.21
UBA3-203ENST00000415609 TMEM132EQ6IEE7 984 aa16.38■□□□□ 0.21
UBA3-203ENST00000415609 GLI2P10070 1586 aa16.38■□□□□ 0.21
UBA3-203ENST00000415609 ARHGAP31Q2M1Z3 1444 aa16.38■□□□□ 0.21
UBA3-203ENST00000415609 NEXMIFQ5QGS0 1516 aa16.38■□□□□ 0.21
UBA3-203ENST00000415609 CARD14Q9BXL6 1004 aa16.38■□□□□ 0.21
UBA3-203ENST00000415609 NUTM2DQ5VT03 806 aaPredicted RBP16.37■□□□□ 0.21
UBA3-203ENST00000415609 EXOC6Q8TAG9 804 aa16.36■□□□□ 0.21
UBA3-203ENST00000415609 FANCIQ9NVI1 1328 aa16.35■□□□□ 0.21
UBA3-203ENST00000415609 VGFO15240 615 aaPredicted RBP16.35■□□□□ 0.21
UBA3-203ENST00000415609 PLEKHH1Q9ULM0 1364 aa16.35■□□□□ 0.21
UBA3-203ENST00000415609 ANP32EQ9BTT0 268 aa16.34■□□□□ 0.21
UBA3-203ENST00000415609 NSD3Q9BZ95 1437 aa16.34■□□□□ 0.21
UBA3-203ENST00000415609 IDI1Q13907 227 aa16.33■□□□□ 0.2
UBA3-203ENST00000415609 ARHGEF28Q8N1W1 1705 aaKnown RBP16.33■□□□□ 0.2
UBA3-203ENST00000415609 PREX1Q8TCU6 1659 aa16.32■□□□□ 0.2
UBA3-203ENST00000415609 CCDC146Q8IYE0 955 aa16.32■□□□□ 0.2
UBA3-203ENST00000415609 RIMBP3CA6NJZ7 1639 aa16.32■□□□□ 0.2
UBA3-203ENST00000415609 RIMBP3BA6NNM3 1639 aa16.32■□□□□ 0.2
UBA3-203ENST00000415609 RIMBP3Q9UFD9 1639 aa16.32■□□□□ 0.2
UBA3-203ENST00000415609 SLC52A1Q9NWF4 448 aa16.31■□□□□ 0.2
UBA3-203ENST00000415609 FAM69CQ0P6D2 419 aa16.31■□□□□ 0.2
UBA3-203ENST00000415609 SLC12A5Q9H2X9 1139 aa16.31■□□□□ 0.2
UBA3-203ENST00000415609 DIP2BQ9P265 1576 aa16.31■□□□□ 0.2
UBA3-203ENST00000415609 PLIN1O60240 522 aa16.3■□□□□ 0.2
UBA3-203ENST00000415609 ZNF521Q96K83 1311 aa16.3■□□□□ 0.2
UBA3-203ENST00000415609 MYO5BQ9ULV0 1848 aa16.3■□□□□ 0.2
UBA3-203ENST00000415609 GOLGA2Q08379 1002 aa16.29■□□□□ 0.2
UBA3-203ENST00000415609 EVC2Q86UK5 1308 aa16.29■□□□□ 0.2
UBA3-203ENST00000415609 MORC1Q86VD1 984 aa16.28■□□□□ 0.2
UBA3-203ENST00000415609 TSPOAP1O95153 1857 aa16.28■□□□□ 0.2
UBA3-203ENST00000415609 TMEM131LA2VDJ0 1609 aa16.28■□□□□ 0.2
UBA3-203ENST00000415609 TULP4Q9NRJ4 1543 aa16.28■□□□□ 0.2
UBA3-203ENST00000415609 DUSP27Q5VZP5 1158 aa16.28■□□□□ 0.2
UBA3-203ENST00000415609 SENP3Q9H4L4 574 aaPredicted RBP16.28■□□□□ 0.2
UBA3-203ENST00000415609 ZFYVE9O95405 1425 aa16.28■□□□□ 0.2
UBA3-203ENST00000415609 MSH5O43196 834 aa16.27■□□□□ 0.2
UBA3-203ENST00000415609 USP32Q8NFA0 1604 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms