RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 SLC26A8Q96RN1 970 aa30.9■■■□□ 2.54
PTPRU-203ENST00000415600 RIMS2Q9UQ26 1411 aa30.88■■■□□ 2.53
PTPRU-203ENST00000415600 HSPA1LP34931 641 aa30.88■■■□□ 2.53
PTPRU-203ENST00000415600 PLEKHG1Q9ULL1 1385 aa30.87■■■□□ 2.53
PTPRU-203ENST00000415600 ZFYVE9O95405 1425 aa30.86■■■□□ 2.53
PTPRU-203ENST00000415600 TMEM131LA2VDJ0 1609 aa30.86■■■□□ 2.53
PTPRU-203ENST00000415600 PROSER2Q86WR7 435 aaPredicted RBP30.82■■■□□ 2.52
PTPRU-203ENST00000415600 NKTRP30414 1462 aaKnown RBP30.8■■■□□ 2.52
PTPRU-203ENST00000415600 TMEM94Q12767 1356 aa30.79■■■□□ 2.52
PTPRU-203ENST00000415600 MYO5BQ9ULV0 1848 aa30.79■■■□□ 2.52
PTPRU-203ENST00000415600 NAIPQ13075 1403 aa30.78■■■□□ 2.52
PTPRU-203ENST00000415600 ALKQ9UM73 1620 aa30.77■■■□□ 2.52
PTPRU-203ENST00000415600 TBX22Q9Y458 520 aa30.76■■■□□ 2.52
PTPRU-203ENST00000415600 NWD1Q149M9 1564 aa30.73■■■□□ 2.51
PTPRU-203ENST00000415600 HFM1A2PYH4 1435 aa30.73■■■□□ 2.51
PTPRU-203ENST00000415600 SENP3Q9H4L4 574 aaPredicted RBP30.72■■■□□ 2.51
PTPRU-203ENST00000415600 TRIM52Q96A61 297 aa30.71■■■□□ 2.51
PTPRU-203ENST00000415600 SPHKAPQ2M3C7 1700 aa30.71■■■□□ 2.51
PTPRU-203ENST00000415600 MSH6P52701 1360 aa30.7■■■□□ 2.51
PTPRU-203ENST00000415600 ZNF326Q5BKZ1 582 aaKnown RBP30.7■■■□□ 2.5
PTPRU-203ENST00000415600 DIP2AQ14689 1571 aa30.7■■■□□ 2.5
PTPRU-203ENST00000415600 XIRP1Q702N8 1843 aaKnown RBP30.69■■■□□ 2.5
PTPRU-203ENST00000415600 PIK3R4Q99570 1358 aa30.69■■■□□ 2.5
PTPRU-203ENST00000415600 NUTM2DQ5VT03 806 aaPredicted RBP30.68■■■□□ 2.5
PTPRU-203ENST00000415600 FAM135BQ49AJ0 1406 aa30.65■■■□□ 2.5
PTPRU-203ENST00000415600 ILDR2Q71H61 639 aa30.65■■■□□ 2.5
PTPRU-203ENST00000415600 CHD2O14647 1828 aaKnown RBP30.64■■■□□ 2.49
PTPRU-203ENST00000415600 ADAMTS13Q76LX8 1427 aa30.62■■■□□ 2.49
PTPRU-203ENST00000415600 NCOA3Q9Y6Q9 1424 aa30.62■■■□□ 2.49
PTPRU-203ENST00000415600 TRPM2O94759 1503 aa30.62■■■□□ 2.49
PTPRU-203ENST00000415600 C14orf37Q86TY3 774 aa30.62■■■□□ 2.49
PTPRU-203ENST00000415600 RBM33Q96EV2 1170 aaKnown RBP30.62■■■□□ 2.49
PTPRU-203ENST00000415600 SLC4A1APQ9BWU0 796 aaKnown RBP30.62■■■□□ 2.49
PTPRU-203ENST00000415600 MED1Q15648 1581 aaPredicted RBP30.6■■■□□ 2.49
PTPRU-203ENST00000415600 PHF23Q9BUL5 403 aaPredicted RBP30.58■■■□□ 2.49
PTPRU-203ENST00000415600 SOCS7O14512 581 aa30.57■■■□□ 2.48
PTPRU-203ENST00000415600 ACIN1Q9UKV3 1341 aaKnown RBP30.54■■■□□ 2.48
PTPRU-203ENST00000415600 SLAIN2Q9P270 581 aa30.54■■■□□ 2.48
PTPRU-203ENST00000415600 CLTCL1P53675 1640 aa30.53■■■□□ 2.48
PTPRU-203ENST00000415600 AMOTL2Q9Y2J4 779 aa30.53■■■□□ 2.48
PTPRU-203ENST00000415600 SETBP1Q9Y6X0 1596 aa30.52■■■□□ 2.48
PTPRU-203ENST00000415600 KIF1BO60333 1816 aa30.51■■■□□ 2.47
PTPRU-203ENST00000415600 CADPS2Q86UW7 1296 aa30.51■■■□□ 2.47
PTPRU-203ENST00000415600 C19orf44Q9H6X5 657 aa30.51■■■□□ 2.47
PTPRU-203ENST00000415600 ATF3P18847 181 aa30.49■■■□□ 2.47
PTPRU-203ENST00000415600 ROBO1Q9Y6N7 1651 aa30.49■■■□□ 2.47
PTPRU-203ENST00000415600 VGFO15240 615 aaPredicted RBP30.48■■■□□ 2.47
PTPRU-203ENST00000415600 RPGRIP1LQ68CZ1 1315 aa30.47■■■□□ 2.47
PTPRU-203ENST00000415600 NEXMIFQ5QGS0 1516 aa30.45■■■□□ 2.47
PTPRU-203ENST00000415600 NRXN3Q9Y4C0 1643 aa30.42■■■□□ 2.46
PTPRU-203ENST00000415600 PTPRUQ92729 1446 aa30.41■■■□□ 2.46
PTPRU-203ENST00000415600 CCDC144AA2RUR9 1427 aa30.38■■■□□ 2.45
PTPRU-203ENST00000415600 DCCP43146 1447 aa30.38■■■□□ 2.45
PTPRU-203ENST00000415600 METP08581 1390 aa30.37■■■□□ 2.45
PTPRU-203ENST00000415600 XRN1Q8IZH2 1706 aaKnown RBP30.37■■■□□ 2.45
PTPRU-203ENST00000415600 MPHOSPH9Q99550 1183 aa30.37■■■□□ 2.45
PTPRU-203ENST00000415600 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.36■■■□□ 2.45
PTPRU-203ENST00000415600 PHLPP1O60346 1717 aa30.32■■■□□ 2.44
PTPRU-203ENST00000415600 JCADQ9P266 1359 aa30.32■■■□□ 2.44
PTPRU-203ENST00000415600 TRIM26Q12899 539 aaPredicted RBP30.32■■■□□ 2.44
PTPRU-203ENST00000415600 FOXD1Q16676 465 aa30.32■■■□□ 2.44
PTPRU-203ENST00000415600 SETD5Q9C0A6 1442 aa30.31■■■□□ 2.44
PTPRU-203ENST00000415600 PCGF6Q9BYE7 350 aa30.27■■■□□ 2.44
PTPRU-203ENST00000415600 ADGRL3Q9HAR2 1447 aa30.26■■■□□ 2.43
PTPRU-203ENST00000415600 PTCH1Q13635 1447 aa30.25■■■□□ 2.43
PTPRU-203ENST00000415600 ANKRD30BQ9BXX2 1392 aa30.24■■■□□ 2.43
PTPRU-203ENST00000415600 PPLO60437 1756 aa30.23■■■□□ 2.43
PTPRU-203ENST00000415600 RGL3Q3MIN7 710 aa30.23■■■□□ 2.43
PTPRU-203ENST00000415600 BRINP3Q76B58 766 aa30.23■■■□□ 2.43
PTPRU-203ENST00000415600 AHDC1Q5TGY3 1603 aaPredicted RBP30.22■■■□□ 2.43
PTPRU-203ENST00000415600 SPATA31A6Q5VVP1 1343 aa30.2■■■□□ 2.43
PTPRU-203ENST00000415600 COL16A1Q07092 1604 aaPredicted RBP30.2■■■□□ 2.42
PTPRU-203ENST00000415600 MST1RQ04912 1400 aa30.18■■■□□ 2.42
PTPRU-203ENST00000415600 SPATA31E1Q6ZUB1 1445 aa30.18■■■□□ 2.42
PTPRU-203ENST00000415600 PRAG1Q86YV5 1406 aa30.17■■■□□ 2.42
PTPRU-203ENST00000415600 ASXL1Q8IXJ9 1541 aa30.15■■■□□ 2.42
PTPRU-203ENST00000415600 SETD1AO15047 1707 aaKnown RBP30.15■■■□□ 2.42
PTPRU-203ENST00000415600 RAB3GAP2Q9H2M9 1393 aa30.15■■■□□ 2.42
PTPRU-203ENST00000415600 ROBO2Q9HCK4 1378 aa30.14■■■□□ 2.42
PTPRU-203ENST00000415600 MEX3CQ5U5Q3 659 aaKnown RBP30.13■■■□□ 2.41
PTPRU-203ENST00000415600 RGS17Q9UGC6 210 aaPredicted RBP30.13■■■□□ 2.41
PTPRU-203ENST00000415600 ADGRF5Q8IZF2 1346 aa30.12■■■□□ 2.41
PTPRU-203ENST00000415600 NALCNQ8IZF0 1738 aa30.11■■■□□ 2.41
PTPRU-203ENST00000415600 LRRC59Q96AG4 307 aaKnown RBP30.1■■■□□ 2.41
PTPRU-203ENST00000415600 SHPRHQ149N8 1683 aa30.07■■■□□ 2.4
PTPRU-203ENST00000415600 C1orf167Q5SNV9 1468 aa30.05■■■□□ 2.4
PTPRU-203ENST00000415600 PIK3C2GO75747 1445 aa30.04■■■□□ 2.4
PTPRU-203ENST00000415600 IFT172Q9UG01 1749 aa30.04■■■□□ 2.4
PTPRU-203ENST00000415600 HRCP23327 699 aa30.04■■■□□ 2.4
PTPRU-203ENST00000415600 LRPPRCP42704 1394 aaKnown RBP30.03■■■□□ 2.4
PTPRU-203ENST00000415600 STK26Q9P289 416 aa30.03■■■□□ 2.4
PTPRU-203ENST00000415600 NHSL1Q5SYE7 1610 aa30.02■■■□□ 2.4
PTPRU-203ENST00000415600 ZNF772Q68DY9 489 aaPredicted RBP30.02■■■□□ 2.4
PTPRU-203ENST00000415600 ABCC11Q96J66 1382 aa30.01■■■□□ 2.39
PTPRU-203ENST00000415600 POTEAQ6S8J7 498 aa30.01■■■□□ 2.39
PTPRU-203ENST00000415600 TECPR2O15040 1411 aa30.01■■■□□ 2.39
PTPRU-203ENST00000415600 NUTM2BA6NNL0 878 aaPredicted RBP29.98■■■□□ 2.39
PTPRU-203ENST00000415600 NUTM2EB1AL46 878 aaPredicted RBP29.98■■■□□ 2.39
PTPRU-203ENST00000415600 NUTM2AQ8IVF1 878 aaPredicted RBP29.98■■■□□ 2.39
PTPRU-203ENST00000415600 MYOM2P54296 1465 aa29.97■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms