RNA–Protein interactions for RNA: ENST00000414562.1

LINC00330-201, long intergenic non-protein coding RNA 330, humanhuman

TSL 2 BASIC

Gene LINC00330, Length 2,036 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00330-201ENST00000414562 NEURL4Q96JN8 1562 aa16.04■□□□□ 0.16
LINC00330-201ENST00000414562 NLRP1Q9C000 1473 aa16.03■□□□□ 0.16
LINC00330-201ENST00000414562 DAXXQ9UER7 740 aaPredicted RBP16.02■□□□□ 0.16
LINC00330-201ENST00000414562 NEXMIFQ5QGS0 1516 aa16.02■□□□□ 0.16
LINC00330-201ENST00000414562 PPLO60437 1756 aa16.02■□□□□ 0.16
LINC00330-201ENST00000414562 ADGRF5Q8IZF2 1346 aa16.01■□□□□ 0.15
LINC00330-201ENST00000414562 SENP3Q9H4L4 574 aaPredicted RBP16.01■□□□□ 0.15
LINC00330-201ENST00000414562 CEP170BQ9Y4F5 1589 aaPredicted RBP16.01■□□□□ 0.15
LINC00330-201ENST00000414562 ZNF326Q5BKZ1 582 aaKnown RBP16.01■□□□□ 0.15
LINC00330-201ENST00000414562 ZFYVE9O95405 1425 aa15.99■□□□□ 0.15
LINC00330-201ENST00000414562 ZNF142P52746 1687 aaPredicted RBP15.99■□□□□ 0.15
LINC00330-201ENST00000414562 KDM5AP29375 1690 aaKnown RBP15.98■□□□□ 0.15
LINC00330-201ENST00000414562 LTKP29376 864 aa15.98■□□□□ 0.15
LINC00330-201ENST00000414562 STAG3Q9UJ98 1225 aa15.97■□□□□ 0.15
LINC00330-201ENST00000414562 PRAG1Q86YV5 1406 aa15.97■□□□□ 0.15
LINC00330-201ENST00000414562 RIMS2Q9UQ26 1411 aa15.97■□□□□ 0.15
LINC00330-201ENST00000414562 TMEM2Q9UHN6 1383 aa15.96■□□□□ 0.15
LINC00330-201ENST00000414562 UHRF1BP1Q6BDS2 1440 aa15.96■□□□□ 0.15
LINC00330-201ENST00000414562 NRXN1Q9ULB1 1477 aa15.96■□□□□ 0.15
LINC00330-201ENST00000414562 ARHGAP23Q9P227 1491 aa15.95■□□□□ 0.14
LINC00330-201ENST00000414562 NBPF1Q3BBV0 1214 aa15.94■□□□□ 0.14
LINC00330-201ENST00000414562 RPGRIP1LQ68CZ1 1315 aa15.94■□□□□ 0.14
LINC00330-201ENST00000414562 HSPA2P54652 639 aa15.94■□□□□ 0.14
LINC00330-201ENST00000414562 MYOM2P54296 1465 aa15.94■□□□□ 0.14
LINC00330-201ENST00000414562 SLIT1O75093 1534 aa15.93■□□□□ 0.14
LINC00330-201ENST00000414562 LMTK3Q96Q04 1460 aa15.93■□□□□ 0.14
LINC00330-201ENST00000414562 THEMISQ8N1K5 641 aaPredicted RBP15.92■□□□□ 0.14
LINC00330-201ENST00000414562 HIRIP3Q9BW71 556 aaPredicted RBP15.92■□□□□ 0.14
LINC00330-201ENST00000414562 TRPM1Q7Z4N2 1603 aa15.91■□□□□ 0.14
LINC00330-201ENST00000414562 NRXN3Q9Y4C0 1643 aa15.91■□□□□ 0.14
LINC00330-201ENST00000414562 CFAP70Q5T0N1 1121 aa15.91■□□□□ 0.14
LINC00330-201ENST00000414562 PIK3C2GO75747 1445 aa15.91■□□□□ 0.14
LINC00330-201ENST00000414562 TXNDC2Q86VQ3 553 aa15.9■□□□□ 0.14
LINC00330-201ENST00000414562 VGFO15240 615 aaPredicted RBP15.88■□□□□ 0.13
LINC00330-201ENST00000414562 SETD1AO15047 1707 aaKnown RBP15.87■□□□□ 0.13
LINC00330-201ENST00000414562 NCKAP5LQ9HCH0 1330 aa15.87■□□□□ 0.13
LINC00330-201ENST00000414562 IQGAP1P46940 1657 aa15.87■□□□□ 0.13
LINC00330-201ENST00000414562 ASXL1Q8IXJ9 1541 aa15.87■□□□□ 0.13
LINC00330-201ENST00000414562 EIF4G2P78344 907 aaKnown RBP eCLIP15.87■□□□□ 0.13
LINC00330-201ENST00000414562 C14orf93Q9H972 538 aaKnown RBP15.87■□□□□ 0.13
LINC00330-201ENST00000414562 RALGAPBQ86X10 1494 aa15.87■□□□□ 0.13
LINC00330-201ENST00000414562 TMEM132EQ6IEE7 984 aa15.86■□□□□ 0.13
LINC00330-201ENST00000414562 SCAF11Q99590 1463 aaKnown RBP15.85■□□□□ 0.13
LINC00330-201ENST00000414562 ALKQ9UM73 1620 aa15.85■□□□□ 0.13
LINC00330-201ENST00000414562 ADAMTS13Q76LX8 1427 aa15.85■□□□□ 0.13
LINC00330-201ENST00000414562 HSPA5P11021 654 aaKnown RBP15.85■□□□□ 0.13
LINC00330-201ENST00000414562 ADGRB1O14514 1584 aa15.84■□□□□ 0.13
LINC00330-201ENST00000414562 MIER1Q8N108 512 aa15.84■□□□□ 0.13
LINC00330-201ENST00000414562 STAC3Q96MF2 364 aa15.84■□□□□ 0.13
LINC00330-201ENST00000414562 STRCQ7RTU9 1775 aa15.84■□□□□ 0.13
LINC00330-201ENST00000414562 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.84■□□□□ 0.13
LINC00330-201ENST00000414562 PLEKHG1Q9ULL1 1385 aa15.83■□□□□ 0.13
LINC00330-201ENST00000414562 MED14O60244 1454 aa15.83■□□□□ 0.13
LINC00330-201ENST00000414562 KIAA1210Q9ULL0 1709 aa15.83■□□□□ 0.13
LINC00330-201ENST00000414562 SETBP1Q9Y6X0 1596 aa15.83■□□□□ 0.12
LINC00330-201ENST00000414562 SLC26A8Q96RN1 970 aa15.83■□□□□ 0.12
LINC00330-201ENST00000414562 METP08581 1390 aa15.82■□□□□ 0.12
LINC00330-201ENST00000414562 GPRASP1Q5JY77 1395 aa15.82■□□□□ 0.12
LINC00330-201ENST00000414562 DDX10Q13206 875 aaKnown RBP15.82■□□□□ 0.12
LINC00330-201ENST00000414562 ANKLE2Q86XL3 938 aa15.82■□□□□ 0.12
LINC00330-201ENST00000414562 POLR1AO95602 1720 aaPredicted RBP15.81■□□□□ 0.12
LINC00330-201ENST00000414562 EID1Q9Y6B2 187 aa15.81■□□□□ 0.12
LINC00330-201ENST00000414562 ROCK2O75116 1388 aaKnown RBP15.8■□□□□ 0.12
LINC00330-201ENST00000414562 PTPRUQ92729 1446 aa15.79■□□□□ 0.12
LINC00330-201ENST00000414562 CARD11Q9BXL7 1154 aa15.78■□□□□ 0.12
LINC00330-201ENST00000414562 HDGFP51858 240 aaKnown RBP15.78■□□□□ 0.12
LINC00330-201ENST00000414562 NPHP4O75161 1426 aaPredicted RBP15.77■□□□□ 0.11
LINC00330-201ENST00000414562 BCANQ96GW7 911 aa15.77■□□□□ 0.11
LINC00330-201ENST00000414562 LAMC1P11047 1609 aa15.76■□□□□ 0.11
LINC00330-201ENST00000414562 STK26Q9P289 416 aa15.75■□□□□ 0.11
LINC00330-201ENST00000414562 TBX22Q9Y458 520 aa15.75■□□□□ 0.11
LINC00330-201ENST00000414562 TRAK1Q9UPV9 953 aa15.74■□□□□ 0.11
LINC00330-201ENST00000414562 USP47Q96K76 1375 aa15.74■□□□□ 0.11
LINC00330-201ENST00000414562 YTHDC2Q9H6S0 1430 aaKnown RBP15.73■□□□□ 0.11
LINC00330-201ENST00000414562 C11orf95C9JLR9 678 aaPredicted RBP15.73■□□□□ 0.11
LINC00330-201ENST00000414562 ST20-MTHFSA0A0A6YYL1 179 aa15.72■□□□□ 0.11
LINC00330-201ENST00000414562 ARHGEF28Q8N1W1 1705 aaKnown RBP15.72■□□□□ 0.11
LINC00330-201ENST00000414562 PLEKHH1Q9ULM0 1364 aa15.71■□□□□ 0.11
LINC00330-201ENST00000414562 STRCP1A6NGW2 1772 aa15.71■□□□□ 0.11
LINC00330-201ENST00000414562 LRPPRCP42704 1394 aaKnown RBP15.71■□□□□ 0.1
LINC00330-201ENST00000414562 CHD2O14647 1828 aaKnown RBP15.7■□□□□ 0.1
LINC00330-201ENST00000414562 WASHC2AQ641Q2 1341 aa15.7■□□□□ 0.1
LINC00330-201ENST00000414562 WAPLQ7Z5K2 1190 aa15.7■□□□□ 0.1
LINC00330-201ENST00000414562 TESK2Q96S53 571 aa15.7■□□□□ 0.1
LINC00330-201ENST00000414562 DIP2AQ14689 1571 aa15.69■□□□□ 0.1
LINC00330-201ENST00000414562 ROBO2Q9HCK4 1378 aa15.69■□□□□ 0.1
LINC00330-201ENST00000414562 AMOTL2Q9Y2J4 779 aa15.68■□□□□ 0.1
LINC00330-201ENST00000414562 ABCC11Q96J66 1382 aa15.68■□□□□ 0.1
LINC00330-201ENST00000414562 XRN1Q8IZH2 1706 aaKnown RBP15.68■□□□□ 0.1
LINC00330-201ENST00000414562 KCNA6P17658 529 aa15.67■□□□□ 0.1
LINC00330-201ENST00000414562 BCL11AQ9H165 835 aa15.67■□□□□ 0.1
LINC00330-201ENST00000414562 SAFB2Q14151 953 aaKnown RBP eCLIP15.67■□□□□ 0.1
LINC00330-201ENST00000414562 RBM33Q96EV2 1170 aaKnown RBP15.67■□□□□ 0.1
LINC00330-201ENST00000414562 CCDC7Q96M83 1385 aa15.66■□□□□ 0.1
LINC00330-201ENST00000414562 TECPR2O15040 1411 aa15.66■□□□□ 0.1
LINC00330-201ENST00000414562 KNDC1Q76NI1 1749 aa15.66■□□□□ 0.1
LINC00330-201ENST00000414562 PRAM1Q96QH2 718 aa15.65■□□□□ 0.1
LINC00330-201ENST00000414562 ANP32CO43423 234 aa15.65■□□□□ 0.1
LINC00330-201ENST00000414562 CPS1P31327 1500 aa15.64■□□□□ 0.09
LINC00330-201ENST00000414562 DLC1Q96QB1 1528 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms