RNA–Protein interactions for RNA: ENST00000414115.5

SHC1-207, Transcript of SHC adaptor protein 1, humanhuman

TSL 3

Gene SHC1, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-207ENST00000414115 NEURL4Q96JN8 1562 aa24.24■■□□□ 1.47
SHC1-207ENST00000414115 POLR1AO95602 1720 aaPredicted RBP24.22■■□□□ 1.47
SHC1-207ENST00000414115 MED14O60244 1454 aa24.2■■□□□ 1.47
SHC1-207ENST00000414115 NPHP4O75161 1426 aaPredicted RBP24.2■■□□□ 1.46
SHC1-207ENST00000414115 HDGFP51858 240 aaKnown RBP24.2■■□□□ 1.46
SHC1-207ENST00000414115 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.2■■□□□ 1.46
SHC1-207ENST00000414115 NEXMIFQ5QGS0 1516 aa24.2■■□□□ 1.46
SHC1-207ENST00000414115 PPP1R15AO75807 674 aaPredicted RBP24.19■■□□□ 1.46
SHC1-207ENST00000414115 RGL3Q3MIN7 710 aa24.19■■□□□ 1.46
SHC1-207ENST00000414115 NUTM2DQ5VT03 806 aaPredicted RBP24.19■■□□□ 1.46
SHC1-207ENST00000414115 DMRT2Q9Y5R5 561 aa24.19■■□□□ 1.46
SHC1-207ENST00000414115 RPGRIP1LQ68CZ1 1315 aa24.17■■□□□ 1.46
SHC1-207ENST00000414115 PLEKHG1Q9ULL1 1385 aa24.15■■□□□ 1.46
SHC1-207ENST00000414115 SIN3AQ96ST3 1273 aa24.14■■□□□ 1.45
SHC1-207ENST00000414115 IQGAP1P46940 1657 aa24.14■■□□□ 1.45
SHC1-207ENST00000414115 SENP3Q9H4L4 574 aaPredicted RBP24.11■■□□□ 1.45
SHC1-207ENST00000414115 BCANQ96GW7 911 aa24.1■■□□□ 1.45
SHC1-207ENST00000414115 VGFO15240 615 aaPredicted RBP24.09■■□□□ 1.45
SHC1-207ENST00000414115 NEUROD1Q13562 356 aa24.09■■□□□ 1.45
SHC1-207ENST00000414115 PPLO60437 1756 aa24.08■■□□□ 1.45
SHC1-207ENST00000414115 IFT172Q9UG01 1749 aa24.07■■□□□ 1.44
SHC1-207ENST00000414115 CCER1Q8TC90 406 aaPredicted RBP24.06■■□□□ 1.44
SHC1-207ENST00000414115 SLC26A8Q96RN1 970 aa24.06■■□□□ 1.44
SHC1-207ENST00000414115 MYOM2P54296 1465 aa24.05■■□□□ 1.44
SHC1-207ENST00000414115 ADGRF5Q8IZF2 1346 aa24.05■■□□□ 1.44
SHC1-207ENST00000414115 SETBP1Q9Y6X0 1596 aa24.04■■□□□ 1.44
SHC1-207ENST00000414115 ADAMTS13Q76LX8 1427 aa24.04■■□□□ 1.44
SHC1-207ENST00000414115 CLSPNQ9HAW4 1339 aa24.04■■□□□ 1.44
SHC1-207ENST00000414115 DCAF11Q8TEB1 546 aa24.03■■□□□ 1.44
SHC1-207ENST00000414115 NRXN3Q9Y4C0 1643 aa24.02■■□□□ 1.44
SHC1-207ENST00000414115 NRXN1Q9ULB1 1477 aa24■■□□□ 1.43
SHC1-207ENST00000414115 DIP2AQ14689 1571 aa24■■□□□ 1.43
SHC1-207ENST00000414115 TBX22Q9Y458 520 aa24■■□□□ 1.43
SHC1-207ENST00000414115 ZNF335Q9H4Z2 1342 aaPredicted RBP24■■□□□ 1.43
SHC1-207ENST00000414115 PIK3C2GO75747 1445 aa24■■□□□ 1.43
SHC1-207ENST00000414115 L3MBTL2Q969R5 705 aa23.99■■□□□ 1.43
SHC1-207ENST00000414115 KDM2AQ9Y2K7 1162 aa23.99■■□□□ 1.43
SHC1-207ENST00000414115 STAC3Q96MF2 364 aa23.97■■□□□ 1.43
SHC1-207ENST00000414115 TONSLQ96HA7 1378 aa23.95■■□□□ 1.42
SHC1-207ENST00000414115 ALKQ9UM73 1620 aa23.94■■□□□ 1.42
SHC1-207ENST00000414115 METP08581 1390 aa23.92■■□□□ 1.42
SHC1-207ENST00000414115 PIK3R4Q99570 1358 aa23.92■■□□□ 1.42
SHC1-207ENST00000414115 LTBP4Q8N2S1 1624 aa23.92■■□□□ 1.42
SHC1-207ENST00000414115 KCNA6P17658 529 aa23.9■■□□□ 1.42
SHC1-207ENST00000414115 SETD1AO15047 1707 aaKnown RBP23.9■■□□□ 1.42
SHC1-207ENST00000414115 CFAP70Q5T0N1 1121 aa23.89■■□□□ 1.41
SHC1-207ENST00000414115 C14orf93Q9H972 538 aaKnown RBP23.89■■□□□ 1.41
SHC1-207ENST00000414115 PRAG1Q86YV5 1406 aa23.89■■□□□ 1.41
SHC1-207ENST00000414115 NWD1Q149M9 1564 aa23.89■■□□□ 1.41
SHC1-207ENST00000414115 PTPRUQ92729 1446 aa23.88■■□□□ 1.41
SHC1-207ENST00000414115 CPS1P31327 1500 aa23.87■■□□□ 1.41
SHC1-207ENST00000414115 STRCP1A6NGW2 1772 aa23.86■■□□□ 1.41
SHC1-207ENST00000414115 ASXL1Q8IXJ9 1541 aa23.86■■□□□ 1.41
SHC1-207ENST00000414115 LAMC1P11047 1609 aa23.86■■□□□ 1.41
SHC1-207ENST00000414115 NKTRP30414 1462 aaKnown RBP23.84■■□□□ 1.41
SHC1-207ENST00000414115 AMOTL2Q9Y2J4 779 aa23.84■■□□□ 1.41
SHC1-207ENST00000414115 CHD2O14647 1828 aaKnown RBP23.83■■□□□ 1.41
SHC1-207ENST00000414115 TMEM132EQ6IEE7 984 aa23.83■■□□□ 1.41
SHC1-207ENST00000414115 TIMELESSQ9UNS1 1208 aa23.82■■□□□ 1.4
SHC1-207ENST00000414115 XRN1Q8IZH2 1706 aaKnown RBP23.81■■□□□ 1.4
SHC1-207ENST00000414115 LRRC7Q96NW7 1537 aa23.81■■□□□ 1.4
SHC1-207ENST00000414115 ADGRB1O14514 1584 aa23.8■■□□□ 1.4
SHC1-207ENST00000414115 LRPPRCP42704 1394 aaKnown RBP23.79■■□□□ 1.4
SHC1-207ENST00000414115 YTHDC2Q9H6S0 1430 aaKnown RBP23.78■■□□□ 1.4
SHC1-207ENST00000414115 NBPF8Q3BBV2 869 aa23.78■■□□□ 1.4
SHC1-207ENST00000414115 CERKQ8TCT0 537 aa23.78■■□□□ 1.4
SHC1-207ENST00000414115 PROSER2Q86WR7 435 aaPredicted RBP23.77■■□□□ 1.4
SHC1-207ENST00000414115 STK26Q9P289 416 aa23.77■■□□□ 1.4
SHC1-207ENST00000414115 TMEM94Q12767 1356 aa23.77■■□□□ 1.4
SHC1-207ENST00000414115 PTCH1Q13635 1447 aa23.76■■□□□ 1.39
SHC1-207ENST00000414115 KIAA1210Q9ULL0 1709 aa23.76■■□□□ 1.39
SHC1-207ENST00000414115 TECPR2O15040 1411 aa23.76■■□□□ 1.39
SHC1-207ENST00000414115 RBM33Q96EV2 1170 aaKnown RBP23.75■■□□□ 1.39
SHC1-207ENST00000414115 ABCC11Q96J66 1382 aa23.75■■□□□ 1.39
SHC1-207ENST00000414115 ROBO2Q9HCK4 1378 aa23.75■■□□□ 1.39
SHC1-207ENST00000414115 NBPF1Q3BBV0 1214 aa23.74■■□□□ 1.39
SHC1-207ENST00000414115 TRPM1Q7Z4N2 1603 aa23.73■■□□□ 1.39
SHC1-207ENST00000414115 IQSEC2Q5JU85 1478 aa23.72■■□□□ 1.39
SHC1-207ENST00000414115 KNDC1Q76NI1 1749 aa23.7■■□□□ 1.38
SHC1-207ENST00000414115 RALGAPBQ86X10 1494 aa23.69■■□□□ 1.38
SHC1-207ENST00000414115 ROCK2O75116 1388 aaKnown RBP23.69■■□□□ 1.38
SHC1-207ENST00000414115 TRAK1Q9UPV9 953 aa23.68■■□□□ 1.38
SHC1-207ENST00000414115 NCOA3Q9Y6Q9 1424 aa23.67■■□□□ 1.38
SHC1-207ENST00000414115 DLC1Q96QB1 1528 aa23.67■■□□□ 1.38
SHC1-207ENST00000414115 FAM135BQ49AJ0 1406 aa23.67■■□□□ 1.38
SHC1-207ENST00000414115 C14orf37Q86TY3 774 aa23.66■■□□□ 1.38
SHC1-207ENST00000414115 XIRP1Q702N8 1843 aaKnown RBP23.66■■□□□ 1.38
SHC1-207ENST00000414115 GPRASP1Q5JY77 1395 aa23.65■■□□□ 1.38
SHC1-207ENST00000414115 PLEKHH1Q9ULM0 1364 aa23.65■■□□□ 1.38
SHC1-207ENST00000414115 WAPLQ7Z5K2 1190 aa23.65■■□□□ 1.38
SHC1-207ENST00000414115 SIRT1Q96EB6 747 aa23.65■■□□□ 1.38
SHC1-207ENST00000414115 PRAM1Q96QH2 718 aa23.64■■□□□ 1.37
SHC1-207ENST00000414115 MSH6P52701 1360 aa23.63■■□□□ 1.37
SHC1-207ENST00000414115 ADGRL3Q9HAR2 1447 aa23.62■■□□□ 1.37
SHC1-207ENST00000414115 CARD11Q9BXL7 1154 aa23.6■■□□□ 1.37
SHC1-207ENST00000414115 C19orf44Q9H6X5 657 aa23.6■■□□□ 1.37
SHC1-207ENST00000414115 POGKQ9P215 609 aa23.6■■□□□ 1.37
SHC1-207ENST00000414115 ARHGEF28Q8N1W1 1705 aaKnown RBP23.59■■□□□ 1.37
SHC1-207ENST00000414115 SAFB2Q14151 953 aaKnown RBP eCLIP23.58■■□□□ 1.37
SHC1-207ENST00000414115 NALCNQ8IZF0 1738 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms