RNA–Protein interactions for RNA: ENST00000414099.6

SCN5A-204, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best) BASIC

Gene SCN5A, Length 8,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-204ENST00000414099 IPO9Q96P70 1041 aaKnown RBP13.01□□□□□ -0.33
SCN5A-204ENST00000414099 PES1O00541 588 aaKnown RBP13□□□□□ -0.33
SCN5A-204ENST00000414099 C9orf78Q9NZ63 289 aaPredicted RBP13□□□□□ -0.33
SCN5A-204ENST00000414099 RBM19Q9Y4C8 960 aaKnown RBP13□□□□□ -0.33
SCN5A-204ENST00000414099 AK7Q96M32 723 aa13□□□□□ -0.33
SCN5A-204ENST00000414099 NOM1Q5C9Z4 860 aaKnown RBP13□□□□□ -0.33
SCN5A-204ENST00000414099 BECN2A8MW95 431 aa13□□□□□ -0.33
SCN5A-204ENST00000414099 FHOD3Q2V2M9 1422 aa12.99□□□□□ -0.33
SCN5A-204ENST00000414099 TRAK1Q9UPV9 953 aa12.99□□□□□ -0.33
SCN5A-204ENST00000414099 RDXP35241 583 aaKnown RBP12.98□□□□□ -0.33
SCN5A-204ENST00000414099 SLKQ9H2G2 1235 aaPredicted RBP12.98□□□□□ -0.33
SCN5A-204ENST00000414099 GAPVD1Q14C86 1478 aa12.98□□□□□ -0.33
SCN5A-204ENST00000414099 MYBBP1AQ9BQG0 1328 aaKnown RBP12.98□□□□□ -0.33
SCN5A-204ENST00000414099 TRDNQ13061 729 aa12.98□□□□□ -0.33
SCN5A-204ENST00000414099 PDE4CQ08493 712 aa12.97□□□□□ -0.33
SCN5A-204ENST00000414099 HSP90AA2PQ14568 343 aaPredicted RBP12.97□□□□□ -0.33
SCN5A-204ENST00000414099 CNKSR2Q8WXI2 1034 aa12.97□□□□□ -0.33
SCN5A-204ENST00000414099 ERICH2A1L162 156 aa12.97□□□□□ -0.33
SCN5A-204ENST00000414099 CCDC43Q96MW1 224 aaKnown RBP12.97□□□□□ -0.33
SCN5A-204ENST00000414099 RBM33Q96EV2 1170 aaKnown RBP12.96□□□□□ -0.33
SCN5A-204ENST00000414099 MYO6Q9UM54 1294 aa12.96□□□□□ -0.33
SCN5A-204ENST00000414099 RNF20Q5VTR2 975 aa12.96□□□□□ -0.33
SCN5A-204ENST00000414099 E9PSI1 815 aa12.96□□□□□ -0.33
SCN5A-204ENST00000414099 CYB5RLQ6IPT4 315 aa12.96□□□□□ -0.33
SCN5A-204ENST00000414099 DIAPH3Q9NSV4 1193 aa12.96□□□□□ -0.33
SCN5A-204ENST00000414099 RUFY1Q96T51 708 aa12.95□□□□□ -0.34
SCN5A-204ENST00000414099 DHX57Q6P158 1386 aaKnown RBP12.95□□□□□ -0.34
SCN5A-204ENST00000414099 ZKSCAN1P17029 563 aaPredicted RBP12.95□□□□□ -0.34
SCN5A-204ENST00000414099 ATAD2BQ9ULI0 1458 aa12.95□□□□□ -0.34
SCN5A-204ENST00000414099 REC8O95072 547 aa12.94□□□□□ -0.34
SCN5A-204ENST00000414099 MYOM3Q5VTT5 1437 aa12.94□□□□□ -0.34
SCN5A-204ENST00000414099 HSP90AB4PQ58FF6 505 aa12.94□□□□□ -0.34
SCN5A-204ENST00000414099 CENPQQ7L2Z9 268 aaPredicted RBP12.94□□□□□ -0.34
SCN5A-204ENST00000414099 ARGLU1Q9NWB6 273 aaPredicted RBP12.94□□□□□ -0.34
SCN5A-204ENST00000414099 SMG6Q86US8 1419 aaKnown RBP12.93□□□□□ -0.34
SCN5A-204ENST00000414099 PCMTD1Q96MG8 357 aaPredicted RBP12.93□□□□□ -0.34
SCN5A-204ENST00000414099 RRBP1Q9P2E9 1410 aaKnown RBP12.93□□□□□ -0.34
SCN5A-204ENST00000414099 DCTN1Q14203 1278 aa12.93□□□□□ -0.34
SCN5A-204ENST00000414099 NUTM2FA1L443 756 aa12.93□□□□□ -0.34
SCN5A-204ENST00000414099 SYTL4Q96C24 671 aaPredicted RBP12.93□□□□□ -0.34
SCN5A-204ENST00000414099 NUTM2DQ5VT03 806 aaPredicted RBP12.93□□□□□ -0.34
SCN5A-204ENST00000414099 RAPGEF4Q8WZA2 1011 aa12.93□□□□□ -0.34
SCN5A-204ENST00000414099 CCAR2Q8N163 923 aaKnown RBP12.92□□□□□ -0.34
SCN5A-204ENST00000414099 RILPL2Q969X0 211 aa12.92□□□□□ -0.34
SCN5A-204ENST00000414099 ZKSCAN2Q63HK3 967 aa12.92□□□□□ -0.34
SCN5A-204ENST00000414099 ARHGAP5Q13017 1502 aa12.92□□□□□ -0.34
SCN5A-204ENST00000414099 ZNF771Q7L3S4 317 aaPredicted RBP12.91□□□□□ -0.34
SCN5A-204ENST00000414099 IFIT2P09913 472 aaKnown RBP12.91□□□□□ -0.34
SCN5A-204ENST00000414099 PHF23Q9BUL5 403 aaPredicted RBP12.91□□□□□ -0.34
SCN5A-204ENST00000414099 CCDC173Q0VFZ6 552 aa12.91□□□□□ -0.34
SCN5A-204ENST00000414099 KIF21BO75037 1637 aa12.91□□□□□ -0.34
SCN5A-204ENST00000414099 L3MBTL2Q969R5 705 aa12.91□□□□□ -0.34
SCN5A-204ENST00000414099 APPP05067 770 aa12.91□□□□□ -0.34
SCN5A-204ENST00000414099 GPRASP1Q5JY77 1395 aa12.91□□□□□ -0.34
SCN5A-204ENST00000414099 G3BP1Q13283 466 aaKnown RBP eCLIP12.91□□□□□ -0.34
SCN5A-204ENST00000414099 ARID3AQ99856 593 aa12.91□□□□□ -0.34
SCN5A-204ENST00000414099 CCDC146Q8IYE0 955 aa12.9□□□□□ -0.34
SCN5A-204ENST00000414099 FAM69CQ0P6D2 419 aa12.9□□□□□ -0.34
SCN5A-204ENST00000414099 SCAPERQ9BY12 1400 aa12.9□□□□□ -0.34
SCN5A-204ENST00000414099 SF3B2Q13435 895 aaKnown RBP12.9□□□□□ -0.34
SCN5A-204ENST00000414099 CPLX1O14810 134 aa12.9□□□□□ -0.34
SCN5A-204ENST00000414099 R3HCC1Q9Y3T6 440 aaKnown RBP12.9□□□□□ -0.34
SCN5A-204ENST00000414099 ODF2Q5BJF6 829 aa12.9□□□□□ -0.34
SCN5A-204ENST00000414099 API5Q9BZZ5 524 aaKnown RBP12.9□□□□□ -0.34
SCN5A-204ENST00000414099 KANK4Q5T7N3 995 aaPredicted RBP12.9□□□□□ -0.35
SCN5A-204ENST00000414099 FYCO1Q9BQS8 1478 aa12.89□□□□□ -0.35
SCN5A-204ENST00000414099 ERC2O15083 957 aa12.89□□□□□ -0.35
SCN5A-204ENST00000414099 DIAPH1O60610 1272 aaKnown RBP12.89□□□□□ -0.35
SCN5A-204ENST00000414099 ERCC4Q92889 916 aaPredicted RBP12.89□□□□□ -0.35
SCN5A-204ENST00000414099 DDX19BQ9UMR2 479 aa12.89□□□□□ -0.35
SCN5A-204ENST00000414099 BRMS1Q9HCU9 246 aa12.89□□□□□ -0.35
SCN5A-204ENST00000414099 AAMPQ13685 434 aa12.89□□□□□ -0.35
SCN5A-204ENST00000414099 WWC2Q6AWC2 1192 aa12.89□□□□□ -0.35
SCN5A-204ENST00000414099 SAFBQ15424 915 aaKnown RBP eCLIP12.89□□□□□ -0.35
SCN5A-204ENST00000414099 RAD21O60216 631 aa12.88□□□□□ -0.35
SCN5A-204ENST00000414099 DDX49Q9Y6V7 483 aaKnown RBP12.88□□□□□ -0.35
SCN5A-204ENST00000414099 FBXW7Q969H0 707 aa12.88□□□□□ -0.35
SCN5A-204ENST00000414099 DHX16O60231 1041 aaKnown RBP12.88□□□□□ -0.35
SCN5A-204ENST00000414099 XBP1P17861 261 aa12.88□□□□□ -0.35
SCN5A-204ENST00000414099 FAM161AQ3B820 660 aa12.88□□□□□ -0.35
SCN5A-204ENST00000414099 ANKRD45Q5TZF3 282 aa12.88□□□□□ -0.35
SCN5A-204ENST00000414099 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.88□□□□□ -0.35
SCN5A-204ENST00000414099 PANK3Q9H999 370 aa12.88□□□□□ -0.35
SCN5A-204ENST00000414099 CWC15Q9P013 229 aaKnown RBP12.88□□□□□ -0.35
SCN5A-204ENST00000414099 NAT10Q9H0A0 1025 aaKnown RBP12.87□□□□□ -0.35
SCN5A-204ENST00000414099 ZRSR2Q15696 482 aaKnown RBP12.87□□□□□ -0.35
SCN5A-204ENST00000414099 MTERF4Q7Z6M4 381 aaKnown RBP12.87□□□□□ -0.35
SCN5A-204ENST00000414099 USP47Q96K76 1375 aa12.87□□□□□ -0.35
SCN5A-204ENST00000414099 CCDC191Q8NCU4 936 aa12.87□□□□□ -0.35
SCN5A-204ENST00000414099 MINK1Q8N4C8 1332 aaPredicted RBP12.87□□□□□ -0.35
SCN5A-204ENST00000414099 DHX8Q14562 1220 aaKnown RBP12.86□□□□□ -0.35
SCN5A-204ENST00000414099 CT47A1Q5JQC4 288 aaPredicted RBP12.86□□□□□ -0.35
SCN5A-204ENST00000414099 PLEKHH2Q8IVE3 1493 aa12.86□□□□□ -0.35
SCN5A-204ENST00000414099 NINLQ9Y2I6 1382 aa12.86□□□□□ -0.35
SCN5A-204ENST00000414099 SLC3A2P08195 630 aaKnown RBP12.86□□□□□ -0.35
SCN5A-204ENST00000414099 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.86□□□□□ -0.35
SCN5A-204ENST00000414099 SYNJ2O15056 1496 aa12.86□□□□□ -0.35
SCN5A-204ENST00000414099 SUPT6HQ7KZ85 1726 aaKnown RBP12.86□□□□□ -0.35
SCN5A-204ENST00000414099 CCP110O43303 1012 aa12.86□□□□□ -0.35
SCN5A-204ENST00000414099 MCTP1Q6DN14 999 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms