RNA–Protein interactions for RNA: ENST00000413509.6

HDAC9-207, Transcript of histone deacetylase 9, humanhuman

TSL 5

Gene HDAC9, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-207ENST00000413509 ROCK2O75116 1388 aaKnown RBP11.67□□□□□ -0.54
HDAC9-207ENST00000413509 IDI1Q13907 227 aa11.66□□□□□ -0.54
HDAC9-207ENST00000413509 FBXO31Q5XUX0 539 aaPredicted RBP11.66□□□□□ -0.54
HDAC9-207ENST00000413509 SETBP1Q9Y6X0 1596 aa11.66□□□□□ -0.54
HDAC9-207ENST00000413509 C3P01024 1663 aa11.65□□□□□ -0.54
HDAC9-207ENST00000413509 ZNF326Q5BKZ1 582 aaKnown RBP11.65□□□□□ -0.54
HDAC9-207ENST00000413509 A2ML1A8K2U0 1454 aa11.64□□□□□ -0.55
HDAC9-207ENST00000413509 MLECQ14165 292 aa11.64□□□□□ -0.55
HDAC9-207ENST00000413509 ADAMTSL3P82987 1691 aa11.64□□□□□ -0.55
HDAC9-207ENST00000413509 ARID4BQ4LE39 1312 aaPredicted RBP11.63□□□□□ -0.55
HDAC9-207ENST00000413509 NBPF1Q3BBV0 1214 aa11.63□□□□□ -0.55
HDAC9-207ENST00000413509 CARD11Q9BXL7 1154 aa11.63□□□□□ -0.55
HDAC9-207ENST00000413509 ADGRB1O14514 1584 aa11.62□□□□□ -0.55
HDAC9-207ENST00000413509 WASHC2AQ641Q2 1341 aa11.62□□□□□ -0.55
HDAC9-207ENST00000413509 ADGRF5Q8IZF2 1346 aa11.62□□□□□ -0.55
HDAC9-207ENST00000413509 HIRIP3Q9BW71 556 aaPredicted RBP11.62□□□□□ -0.55
HDAC9-207ENST00000413509 TNRQ92752 1358 aa11.62□□□□□ -0.55
HDAC9-207ENST00000413509 CCDC7Q96M83 1385 aa11.62□□□□□ -0.55
HDAC9-207ENST00000413509 NLRP1Q9C000 1473 aa11.62□□□□□ -0.55
HDAC9-207ENST00000413509 SCAF11Q99590 1463 aaKnown RBP11.61□□□□□ -0.55
HDAC9-207ENST00000413509 MYO3AQ8NEV4 1616 aa11.6□□□□□ -0.55
HDAC9-207ENST00000413509 UBR1Q8IWV7 1749 aa11.6□□□□□ -0.55
HDAC9-207ENST00000413509 ESF1Q9H501 851 aaKnown RBP11.6□□□□□ -0.55
HDAC9-207ENST00000413509 C11orf95C9JLR9 678 aaPredicted RBP11.59□□□□□ -0.55
HDAC9-207ENST00000413509 C14orf93Q9H972 538 aaKnown RBP11.59□□□□□ -0.55
HDAC9-207ENST00000413509 ASXL1Q8IXJ9 1541 aa11.58□□□□□ -0.56
HDAC9-207ENST00000413509 KIF7Q2M1P5 1343 aa11.58□□□□□ -0.56
HDAC9-207ENST00000413509 SETD1AO15047 1707 aaKnown RBP11.57□□□□□ -0.56
HDAC9-207ENST00000413509 RIMS1Q86UR5 1692 aaKnown RBP11.57□□□□□ -0.56
HDAC9-207ENST00000413509 ST20-MTHFSA0A0A6YYL1 179 aa11.57□□□□□ -0.56
HDAC9-207ENST00000413509 VGFO15240 615 aaPredicted RBP11.57□□□□□ -0.56
HDAC9-207ENST00000413509 CHGAP10645 457 aaKnown RBP11.57□□□□□ -0.56
HDAC9-207ENST00000413509 TESK2Q96S53 571 aa11.57□□□□□ -0.56
HDAC9-207ENST00000413509 RIMS2Q9UQ26 1411 aa11.56□□□□□ -0.56
HDAC9-207ENST00000413509 NRXN3Q9Y4C0 1643 aa11.56□□□□□ -0.56
HDAC9-207ENST00000413509 SBNO2Q9Y2G9 1366 aa11.55□□□□□ -0.56
HDAC9-207ENST00000413509 CFAP70Q5T0N1 1121 aa11.55□□□□□ -0.56
HDAC9-207ENST00000413509 ARHGAP23Q9P227 1491 aa11.55□□□□□ -0.56
HDAC9-207ENST00000413509 SLIT1O75093 1534 aa11.55□□□□□ -0.56
HDAC9-207ENST00000413509 EIF3AQ14152 1382 aaKnown RBP11.54□□□□□ -0.56
HDAC9-207ENST00000413509 ALKQ9UM73 1620 aa11.54□□□□□ -0.56
HDAC9-207ENST00000413509 DDX10Q13206 875 aaKnown RBP11.54□□□□□ -0.56
HDAC9-207ENST00000413509 ZNF142P52746 1687 aaPredicted RBP11.54□□□□□ -0.56
HDAC9-207ENST00000413509 PTPRMP28827 1452 aa11.53□□□□□ -0.56
HDAC9-207ENST00000413509 ARHGEF28Q8N1W1 1705 aaKnown RBP11.53□□□□□ -0.56
HDAC9-207ENST00000413509 MIER1Q8N108 512 aa11.53□□□□□ -0.56
HDAC9-207ENST00000413509 TMEM2Q9UHN6 1383 aa11.53□□□□□ -0.56
HDAC9-207ENST00000413509 CEBPAP49715 358 aaPredicted RBP11.51□□□□□ -0.57
HDAC9-207ENST00000413509 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.51□□□□□ -0.57
HDAC9-207ENST00000413509 DISP3Q9P2K9 1392 aa11.51□□□□□ -0.57
HDAC9-207ENST00000413509 SETD1BQ9UPS6 1966 aaKnown RBP11.5□□□□□ -0.57
HDAC9-207ENST00000413509 CEP170BQ9Y4F5 1589 aaPredicted RBP11.5□□□□□ -0.57
HDAC9-207ENST00000413509 DLC1Q96QB1 1528 aa11.5□□□□□ -0.57
HDAC9-207ENST00000413509 QRICH2Q9H0J4 1663 aa11.49□□□□□ -0.57
HDAC9-207ENST00000413509 STAG3Q9UJ98 1225 aa11.49□□□□□ -0.57
HDAC9-207ENST00000413509 MED14O60244 1454 aa11.49□□□□□ -0.57
HDAC9-207ENST00000413509 KNDC1Q76NI1 1749 aa11.49□□□□□ -0.57
HDAC9-207ENST00000413509 SLC24A1O60721 1099 aa11.48□□□□□ -0.57
HDAC9-207ENST00000413509 PLEKHG1Q9ULL1 1385 aa11.48□□□□□ -0.57
HDAC9-207ENST00000413509 MYOM1P52179 1685 aa11.47□□□□□ -0.57
HDAC9-207ENST00000413509 TECPR2O15040 1411 aa11.47□□□□□ -0.57
HDAC9-207ENST00000413509 YTHDC2Q9H6S0 1430 aaKnown RBP11.47□□□□□ -0.57
HDAC9-207ENST00000413509 NUTM2DQ5VT03 806 aaPredicted RBP11.47□□□□□ -0.57
HDAC9-207ENST00000413509 ADAMTS13Q76LX8 1427 aa11.46□□□□□ -0.57
HDAC9-207ENST00000413509 LRPPRCP42704 1394 aaKnown RBP11.46□□□□□ -0.57
HDAC9-207ENST00000413509 CENPJQ9HC77 1338 aaPredicted RBP11.46□□□□□ -0.57
HDAC9-207ENST00000413509 HDGFP51858 240 aaKnown RBP11.46□□□□□ -0.57
HDAC9-207ENST00000413509 TMF1P82094 1093 aa11.46□□□□□ -0.57
HDAC9-207ENST00000413509 DIP2AQ14689 1571 aa11.45□□□□□ -0.58
HDAC9-207ENST00000413509 TMEM132EQ6IEE7 984 aa11.45□□□□□ -0.58
HDAC9-207ENST00000413509 CPS1P31327 1500 aa11.45□□□□□ -0.58
HDAC9-207ENST00000413509 ABCC11Q96J66 1382 aa11.44□□□□□ -0.58
HDAC9-207ENST00000413509 TULP4Q9NRJ4 1543 aa11.44□□□□□ -0.58
HDAC9-207ENST00000413509 LTKP29376 864 aa11.43□□□□□ -0.58
HDAC9-207ENST00000413509 CDCA8Q53HL2 280 aa11.43□□□□□ -0.58
HDAC9-207ENST00000413509 THEMISQ8N1K5 641 aaPredicted RBP11.43□□□□□ -0.58
HDAC9-207ENST00000413509 PUS7Q96PZ0 661 aaKnown RBP11.43□□□□□ -0.58
HDAC9-207ENST00000413509 KDM4FA0A1W2PPD8 638 aa11.42□□□□□ -0.58
HDAC9-207ENST00000413509 CCER2I3L3R5 266 aa11.42□□□□□ -0.58
HDAC9-207ENST00000413509 TRAK1Q9UPV9 953 aa11.42□□□□□ -0.58
HDAC9-207ENST00000413509 FAM135BQ49AJ0 1406 aa11.42□□□□□ -0.58
HDAC9-207ENST00000413509 METP08581 1390 aa11.41□□□□□ -0.58
HDAC9-207ENST00000413509 ANP32CO43423 234 aa11.41□□□□□ -0.58
HDAC9-207ENST00000413509 SIRT1Q96EB6 747 aa11.41□□□□□ -0.58
HDAC9-207ENST00000413509 PER1O15534 1290 aaPredicted RBP11.39□□□□□ -0.59
HDAC9-207ENST00000413509 TXNDC2Q86VQ3 553 aa11.39□□□□□ -0.59
HDAC9-207ENST00000413509 XRN1Q8IZH2 1706 aaKnown RBP11.39□□□□□ -0.59
HDAC9-207ENST00000413509 PRKRIP1Q9H875 184 aaPredicted RBP11.39□□□□□ -0.59
HDAC9-207ENST00000413509 EID1Q9Y6B2 187 aa11.39□□□□□ -0.59
HDAC9-207ENST00000413509 KTN1Q86UP2 1357 aaKnown RBP11.39□□□□□ -0.59
HDAC9-207ENST00000413509 ADGRB2O60241 1585 aa11.38□□□□□ -0.59
HDAC9-207ENST00000413509 PTCH1Q13635 1447 aa11.37□□□□□ -0.59
HDAC9-207ENST00000413509 PTPRUQ92729 1446 aa11.37□□□□□ -0.59
HDAC9-207ENST00000413509 TBX22Q9Y458 520 aa11.37□□□□□ -0.59
HDAC9-207ENST00000413509 PIK3R4Q99570 1358 aa11.37□□□□□ -0.59
HDAC9-207ENST00000413509 USP32Q8NFA0 1604 aa11.36□□□□□ -0.59
HDAC9-207ENST00000413509 PRAM1Q96QH2 718 aa11.36□□□□□ -0.59
HDAC9-207ENST00000413509 NPC1L1Q9UHC9 1359 aa11.36□□□□□ -0.59
HDAC9-207ENST00000413509 EVC2Q86UK5 1308 aa11.35□□□□□ -0.59
HDAC9-207ENST00000413509 POLR3GLQ9BT43 218 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms