RNA–Protein interactions for RNA: ENST00000413167.2

SPECC1-207, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, humanhuman

TSL 3

Gene SPECC1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1-207ENST00000413167 NOS1P29475 1434 aa23.39■■□□□ 1.33
SPECC1-207ENST00000413167 NKTRP30414 1462 aaKnown RBP23.37■■□□□ 1.33
SPECC1-207ENST00000413167 SLAIN2Q9P270 581 aa23.37■■□□□ 1.33
SPECC1-207ENST00000413167 BCANQ96GW7 911 aa23.36■■□□□ 1.33
SPECC1-207ENST00000413167 KANK1Q14678 1352 aa23.35■■□□□ 1.33
SPECC1-207ENST00000413167 MSH6P52701 1360 aa23.34■■□□□ 1.33
SPECC1-207ENST00000413167 JCADQ9P266 1359 aa23.33■■□□□ 1.33
SPECC1-207ENST00000413167 ZFYVE9O95405 1425 aa23.33■■□□□ 1.32
SPECC1-207ENST00000413167 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.3■■□□□ 1.32
SPECC1-207ENST00000413167 NUTM2DQ5VT03 806 aaPredicted RBP23.3■■□□□ 1.32
SPECC1-207ENST00000413167 TRIM52Q96A61 297 aa23.3■■□□□ 1.32
SPECC1-207ENST00000413167 TMEM131LA2VDJ0 1609 aa23.3■■□□□ 1.32
SPECC1-207ENST00000413167 FGD6Q6ZV73 1430 aa23.29■■□□□ 1.32
SPECC1-207ENST00000413167 RIMS2Q9UQ26 1411 aa23.27■■□□□ 1.32
SPECC1-207ENST00000413167 UPF1Q92900 1129 aaKnown RBP eCLIP23.27■■□□□ 1.32
SPECC1-207ENST00000413167 ANKRD30AQ9BXX3 1397 aa23.26■■□□□ 1.31
SPECC1-207ENST00000413167 PLEKHG1Q9ULL1 1385 aa23.26■■□□□ 1.31
SPECC1-207ENST00000413167 SHPRHQ149N8 1683 aa23.25■■□□□ 1.31
SPECC1-207ENST00000413167 ADAMTS13Q76LX8 1427 aa23.22■■□□□ 1.31
SPECC1-207ENST00000413167 AHDC1Q5TGY3 1603 aaPredicted RBP23.22■■□□□ 1.31
SPECC1-207ENST00000413167 SLC52A1Q9NWF4 448 aa23.21■■□□□ 1.31
SPECC1-207ENST00000413167 DIP2AQ14689 1571 aa23.21■■□□□ 1.31
SPECC1-207ENST00000413167 E9PCH4 1651 aa23.2■■□□□ 1.3
SPECC1-207ENST00000413167 PPP1R15AO75807 674 aaPredicted RBP23.2■■□□□ 1.3
SPECC1-207ENST00000413167 MEX3CQ5U5Q3 659 aaKnown RBP23.2■■□□□ 1.3
SPECC1-207ENST00000413167 C14orf37Q86TY3 774 aa23.19■■□□□ 1.3
SPECC1-207ENST00000413167 NUTM2BA6NNL0 878 aaPredicted RBP23.18■■□□□ 1.3
SPECC1-207ENST00000413167 NUTM2EB1AL46 878 aaPredicted RBP23.18■■□□□ 1.3
SPECC1-207ENST00000413167 CHGAP10645 457 aaKnown RBP23.18■■□□□ 1.3
SPECC1-207ENST00000413167 NUTM2AQ8IVF1 878 aaPredicted RBP23.18■■□□□ 1.3
SPECC1-207ENST00000413167 ADGRL2O95490 1459 aa23.17■■□□□ 1.3
SPECC1-207ENST00000413167 PTPRUQ92729 1446 aa23.17■■□□□ 1.3
SPECC1-207ENST00000413167 SPATA31A6Q5VVP1 1343 aa23.16■■□□□ 1.3
SPECC1-207ENST00000413167 TBX22Q9Y458 520 aa23.16■■□□□ 1.3
SPECC1-207ENST00000413167 RPRD2Q5VT52 1461 aaKnown RBP23.15■■□□□ 1.3
SPECC1-207ENST00000413167 ANKRD50Q9ULJ7 1429 aa23.14■■□□□ 1.29
SPECC1-207ENST00000413167 BRINP3Q76B58 766 aa23.13■■□□□ 1.29
SPECC1-207ENST00000413167 ZNF772Q68DY9 489 aaPredicted RBP23.12■■□□□ 1.29
SPECC1-207ENST00000413167 UNC13BO14795 1591 aa23.11■■□□□ 1.29
SPECC1-207ENST00000413167 FAM50AQ14320 339 aaKnown RBP23.11■■□□□ 1.29
SPECC1-207ENST00000413167 DDX17Q92841 729 aaKnown RBP23.11■■□□□ 1.29
SPECC1-207ENST00000413167 NRXN3Q9Y4C0 1643 aa23.11■■□□□ 1.29
SPECC1-207ENST00000413167 C19orf44Q9H6X5 657 aa23.1■■□□□ 1.29
SPECC1-207ENST00000413167 RXRBP28702 533 aa23.09■■□□□ 1.29
SPECC1-207ENST00000413167 NCOA3Q9Y6Q9 1424 aa23.08■■□□□ 1.29
SPECC1-207ENST00000413167 NHSL1Q5SYE7 1610 aa23.08■■□□□ 1.29
SPECC1-207ENST00000413167 ATF3P18847 181 aa23.08■■□□□ 1.29
SPECC1-207ENST00000413167 CADPS2Q86UW7 1296 aa23.08■■□□□ 1.29
SPECC1-207ENST00000413167 AMOTL2Q9Y2J4 779 aa23.08■■□□□ 1.29
SPECC1-207ENST00000413167 ASXL1Q8IXJ9 1541 aa23.08■■□□□ 1.28
SPECC1-207ENST00000413167 AFF2P51816 1311 aa23.08■■□□□ 1.28
SPECC1-207ENST00000413167 XRN1Q8IZH2 1706 aaKnown RBP23.07■■□□□ 1.28
SPECC1-207ENST00000413167 APLP2Q06481 763 aa23.06■■□□□ 1.28
SPECC1-207ENST00000413167 TRPM2O94759 1503 aa23.05■■□□□ 1.28
SPECC1-207ENST00000413167 RGS12O14924 1447 aa23.04■■□□□ 1.28
SPECC1-207ENST00000413167 MST1RQ04912 1400 aa23.03■■□□□ 1.28
SPECC1-207ENST00000413167 IQGAP3Q86VI3 1631 aa23.02■■□□□ 1.28
SPECC1-207ENST00000413167 HDGFP51858 240 aaKnown RBP23.02■■□□□ 1.28
SPECC1-207ENST00000413167 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.02■■□□□ 1.28
SPECC1-207ENST00000413167 NALCNQ8IZF0 1738 aa23.01■■□□□ 1.27
SPECC1-207ENST00000413167 CDK12Q9NYV4 1490 aaPredicted RBP23■■□□□ 1.27
SPECC1-207ENST00000413167 PIK3R4Q99570 1358 aa23■■□□□ 1.27
SPECC1-207ENST00000413167 C8orf37Q96NL8 207 aa22.99■■□□□ 1.27
SPECC1-207ENST00000413167 SETD5Q9C0A6 1442 aa22.99■■□□□ 1.27
SPECC1-207ENST00000413167 METP08581 1390 aa22.98■■□□□ 1.27
SPECC1-207ENST00000413167 PNPLA6Q8IY17 1366 aa22.96■■□□□ 1.27
SPECC1-207ENST00000413167 QTRT2Q9H974 415 aaKnown RBP22.95■■□□□ 1.26
SPECC1-207ENST00000413167 SETBP1Q9Y6X0 1596 aa22.94■■□□□ 1.26
SPECC1-207ENST00000413167 SPHKAPQ2M3C7 1700 aa22.94■■□□□ 1.26
SPECC1-207ENST00000413167 DCCP43146 1447 aa22.92■■□□□ 1.26
SPECC1-207ENST00000413167 ADAMTS2O95450 1211 aa22.92■■□□□ 1.26
SPECC1-207ENST00000413167 NUP155O75694 1391 aa22.89■■□□□ 1.26
SPECC1-207ENST00000413167 RBM6P78332 1123 aaKnown RBP22.88■■□□□ 1.25
SPECC1-207ENST00000413167 LRRC59Q96AG4 307 aaKnown RBP22.88■■□□□ 1.25
SPECC1-207ENST00000413167 ADGRL3Q9HAR2 1447 aa22.87■■□□□ 1.25
SPECC1-207ENST00000413167 CLTCL1P53675 1640 aa22.86■■□□□ 1.25
SPECC1-207ENST00000413167 ITGAEP38570 1179 aa22.86■■□□□ 1.25
SPECC1-207ENST00000413167 SRCAPQ6ZRS2 3230 aa22.86■■□□□ 1.25
SPECC1-207ENST00000413167 NEXMIFQ5QGS0 1516 aa22.85■■□□□ 1.25
SPECC1-207ENST00000413167 ZNF326Q5BKZ1 582 aaKnown RBP22.84■■□□□ 1.25
SPECC1-207ENST00000413167 NGLY1Q96IV0 654 aa22.84■■□□□ 1.25
SPECC1-207ENST00000413167 ORAI2Q96SN7 254 aa22.84■■□□□ 1.25
SPECC1-207ENST00000413167 C1orf167Q5SNV9 1468 aa22.83■■□□□ 1.25
SPECC1-207ENST00000413167 LAMC1P11047 1609 aa22.82■■□□□ 1.24
SPECC1-207ENST00000413167 ROCK1Q13464 1354 aa22.8■■□□□ 1.24
SPECC1-207ENST00000413167 ROBO2Q9HCK4 1378 aa22.77■■□□□ 1.24
SPECC1-207ENST00000413167 PPARGC1BQ86YN6 1023 aaKnown RBP22.77■■□□□ 1.24
SPECC1-207ENST00000413167 USP21Q9UK80 565 aa22.77■■□□□ 1.24
SPECC1-207ENST00000413167 KIF1BO60333 1816 aa22.77■■□□□ 1.24
SPECC1-207ENST00000413167 MARF1Q9Y4F3 1742 aaKnown RBP22.75■■□□□ 1.23
SPECC1-207ENST00000413167 SOS2Q07890 1332 aaPredicted RBP22.75■■□□□ 1.23
SPECC1-207ENST00000413167 EP400Q96L91 3159 aa22.74■■□□□ 1.23
SPECC1-207ENST00000413167 COL22A1Q8NFW1 1626 aaPredicted RBP22.74■■□□□ 1.23
SPECC1-207ENST00000413167 ATAD2Q6PL18 1390 aa22.74■■□□□ 1.23
SPECC1-207ENST00000413167 ATRNO75882 1429 aa22.74■■□□□ 1.23
SPECC1-207ENST00000413167 XPCQ01831 940 aaPredicted RBP22.7■■□□□ 1.22
SPECC1-207ENST00000413167 FNBP4Q8N3X1 1017 aaPredicted RBP22.7■■□□□ 1.22
SPECC1-207ENST00000413167 BRWD3Q6RI45 1802 aa22.69■■□□□ 1.22
SPECC1-207ENST00000413167 TRPC5Q9UL62 973 aaPredicted RBP22.69■■□□□ 1.22
SPECC1-207ENST00000413167 BCL9LQ86UU0 1499 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms