RNA–Protein interactions for RNA: ENST00000412962.4

CROCCP2-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

BASIC

Gene CROCCP2, Length 2,773 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-202ENST00000412962 FAM69CQ0P6D2 419 aa23.92■■□□□ 1.42
CROCCP2-202ENST00000412962 YEATS2Q9ULM3 1422 aa23.92■■□□□ 1.42
CROCCP2-202ENST00000412962 ADGRB3O60242 1522 aa23.92■■□□□ 1.42
CROCCP2-202ENST00000412962 KTN1Q86UP2 1357 aaKnown RBP23.9■■□□□ 1.42
CROCCP2-202ENST00000412962 ADGRF5Q8IZF2 1346 aa23.89■■□□□ 1.41
CROCCP2-202ENST00000412962 FKBP8Q14318 412 aa23.88■■□□□ 1.41
CROCCP2-202ENST00000412962 RALBP1Q15311 655 aa23.87■■□□□ 1.41
CROCCP2-202ENST00000412962 CHGAP10645 457 aaKnown RBP23.87■■□□□ 1.41
CROCCP2-202ENST00000412962 TSPOAP1O95153 1857 aa23.87■■□□□ 1.41
CROCCP2-202ENST00000412962 SIGLEC1Q9BZZ2 1709 aa23.86■■□□□ 1.41
CROCCP2-202ENST00000412962 MYBBP1AQ9BQG0 1328 aaKnown RBP23.86■■□□□ 1.41
CROCCP2-202ENST00000412962 NEFLP07196 543 aa23.86■■□□□ 1.41
CROCCP2-202ENST00000412962 CFAP70Q5T0N1 1121 aa23.86■■□□□ 1.41
CROCCP2-202ENST00000412962 ZBED9Q6R2W3 1325 aa23.85■■□□□ 1.41
CROCCP2-202ENST00000412962 PER1O15534 1290 aaPredicted RBP23.85■■□□□ 1.41
CROCCP2-202ENST00000412962 TMC1Q8TDI8 760 aa23.85■■□□□ 1.41
CROCCP2-202ENST00000412962 EIF3AQ14152 1382 aaKnown RBP23.85■■□□□ 1.41
CROCCP2-202ENST00000412962 NRXN1Q9ULB1 1477 aa23.85■■□□□ 1.41
CROCCP2-202ENST00000412962 NOS1P29475 1434 aa23.84■■□□□ 1.41
CROCCP2-202ENST00000412962 SENP3-EIF4A1A0A087X0R7 540 aa23.84■■□□□ 1.41
CROCCP2-202ENST00000412962 ZMYM4Q5VZL5 1548 aa23.84■■□□□ 1.41
CROCCP2-202ENST00000412962 ZC3H13Q5T200 1668 aaKnown RBP23.83■■□□□ 1.41
CROCCP2-202ENST00000412962 PANK3Q9H999 370 aa23.83■■□□□ 1.4
CROCCP2-202ENST00000412962 PARD3Q8TEW0 1356 aa23.82■■□□□ 1.4
CROCCP2-202ENST00000412962 PPLO60437 1756 aa23.82■■□□□ 1.4
CROCCP2-202ENST00000412962 BRD4O60885 1362 aaPredicted RBP23.81■■□□□ 1.4
CROCCP2-202ENST00000412962 PNISRQ8TF01 805 aaKnown RBP23.8■■□□□ 1.4
CROCCP2-202ENST00000412962 SYNMO15061 1565 aa23.8■■□□□ 1.4
CROCCP2-202ENST00000412962 TSHZ2Q9NRE2 1034 aa23.79■■□□□ 1.4
CROCCP2-202ENST00000412962 PIK3C2BO00750 1634 aa23.79■■□□□ 1.4
CROCCP2-202ENST00000412962 ARHGAP31Q2M1Z3 1444 aa23.78■■□□□ 1.4
CROCCP2-202ENST00000412962 IRX6P78412 446 aaPredicted RBP23.77■■□□□ 1.4
CROCCP2-202ENST00000412962 CDCA8Q53HL2 280 aa23.77■■□□□ 1.4
CROCCP2-202ENST00000412962 CC2D1BQ5T0F9 858 aaKnown RBP23.75■■□□□ 1.39
CROCCP2-202ENST00000412962 PIK3C2GO75747 1445 aa23.75■■□□□ 1.39
CROCCP2-202ENST00000412962 NLRP13Q86W25 1043 aa23.74■■□□□ 1.39
CROCCP2-202ENST00000412962 SETBP1Q9Y6X0 1596 aa23.74■■□□□ 1.39
CROCCP2-202ENST00000412962 RPGRIP1LQ68CZ1 1315 aa23.73■■□□□ 1.39
CROCCP2-202ENST00000412962 KDM5AP29375 1690 aaKnown RBP23.72■■□□□ 1.39
CROCCP2-202ENST00000412962 LRPPRCP42704 1394 aaKnown RBP23.72■■□□□ 1.39
CROCCP2-202ENST00000412962 MYOM1P52179 1685 aa23.72■■□□□ 1.39
CROCCP2-202ENST00000412962 MYO3AQ8NEV4 1616 aa23.7■■□□□ 1.38
CROCCP2-202ENST00000412962 PREX1Q8TCU6 1659 aa23.69■■□□□ 1.38
CROCCP2-202ENST00000412962 C14orf93Q9H972 538 aaKnown RBP23.69■■□□□ 1.38
CROCCP2-202ENST00000412962 ERVK-7P63135 1459 aa23.68■■□□□ 1.38
CROCCP2-202ENST00000412962 NEXMIFQ5QGS0 1516 aa23.68■■□□□ 1.38
CROCCP2-202ENST00000412962 ADGRB1O14514 1584 aa23.67■■□□□ 1.38
CROCCP2-202ENST00000412962 IDI1Q13907 227 aa23.67■■□□□ 1.38
CROCCP2-202ENST00000412962 KIF13AQ9H1H9 1805 aa23.67■■□□□ 1.38
CROCCP2-202ENST00000412962 REREQ9P2R6 1566 aa23.66■■□□□ 1.38
CROCCP2-202ENST00000412962 SLC24A1O60721 1099 aa23.66■■□□□ 1.38
CROCCP2-202ENST00000412962 KNSTRNQ9Y448 316 aa23.66■■□□□ 1.38
CROCCP2-202ENST00000412962 NUTM2DQ5VT03 806 aaPredicted RBP23.64■■□□□ 1.38
CROCCP2-202ENST00000412962 SLC52A1Q9NWF4 448 aa23.64■■□□□ 1.38
CROCCP2-202ENST00000412962 SBNO2Q9Y2G9 1366 aa23.63■■□□□ 1.37
CROCCP2-202ENST00000412962 CENPJQ9HC77 1338 aaPredicted RBP23.63■■□□□ 1.37
CROCCP2-202ENST00000412962 TRAK1Q9UPV9 953 aa23.63■■□□□ 1.37
CROCCP2-202ENST00000412962 MYO5BQ9ULV0 1848 aa23.63■■□□□ 1.37
CROCCP2-202ENST00000412962 AGLP35573 1532 aa23.62■■□□□ 1.37
CROCCP2-202ENST00000412962 VGFO15240 615 aaPredicted RBP23.62■■□□□ 1.37
CROCCP2-202ENST00000412962 TMEM132EQ6IEE7 984 aa23.62■■□□□ 1.37
CROCCP2-202ENST00000412962 AMER1Q5JTC6 1135 aaPredicted RBP23.61■■□□□ 1.37
CROCCP2-202ENST00000412962 ASXL1Q8IXJ9 1541 aa23.61■■□□□ 1.37
CROCCP2-202ENST00000412962 SMG6Q86US8 1419 aaKnown RBP23.61■■□□□ 1.37
CROCCP2-202ENST00000412962 QRICH2Q9H0J4 1663 aa23.6■■□□□ 1.37
CROCCP2-202ENST00000412962 TMEM131LA2VDJ0 1609 aa23.59■■□□□ 1.37
CROCCP2-202ENST00000412962 FBXO31Q5XUX0 539 aaPredicted RBP23.58■■□□□ 1.37
CROCCP2-202ENST00000412962 CLTCQ00610 1675 aaKnown RBP23.57■■□□□ 1.36
CROCCP2-202ENST00000412962 NUDCQ9Y266 331 aa23.56■■□□□ 1.36
CROCCP2-202ENST00000412962 ARHGEF40Q8TER5 1519 aa23.56■■□□□ 1.36
CROCCP2-202ENST00000412962 ZFYVE9O95405 1425 aa23.55■■□□□ 1.36
CROCCP2-202ENST00000412962 PPP6R1Q9UPN7 881 aa23.54■■□□□ 1.36
CROCCP2-202ENST00000412962 NPC1L1Q9UHC9 1359 aa23.53■■□□□ 1.36
CROCCP2-202ENST00000412962 ARHGEF28Q8N1W1 1705 aaKnown RBP23.53■■□□□ 1.36
CROCCP2-202ENST00000412962 PPP2R1AP30153 589 aa23.52■■□□□ 1.36
CROCCP2-202ENST00000412962 MLECQ14165 292 aa23.51■■□□□ 1.35
CROCCP2-202ENST00000412962 SENP3Q9H4L4 574 aaPredicted RBP23.5■■□□□ 1.35
CROCCP2-202ENST00000412962 BLMP54132 1417 aaPredicted RBP23.49■■□□□ 1.35
CROCCP2-202ENST00000412962 INSRP06213 1382 aa23.48■■□□□ 1.35
CROCCP2-202ENST00000412962 CARD14Q9BXL6 1004 aa23.48■■□□□ 1.35
CROCCP2-202ENST00000412962 SALL2Q9Y467 1007 aaPredicted RBP23.46■■□□□ 1.35
CROCCP2-202ENST00000412962 ERICH6BQ5W0A0 696 aa23.46■■□□□ 1.35
CROCCP2-202ENST00000412962 SPATA31D1Q6ZQQ2 1576 aa23.46■■□□□ 1.35
CROCCP2-202ENST00000412962 STAG3Q9UJ98 1225 aa23.46■■□□□ 1.35
CROCCP2-202ENST00000412962 TULP4Q9NRJ4 1543 aa23.43■■□□□ 1.34
CROCCP2-202ENST00000412962 ERICH6Q7L0X2 663 aa23.43■■□□□ 1.34
CROCCP2-202ENST00000412962 STK26Q9P289 416 aa23.41■■□□□ 1.34
CROCCP2-202ENST00000412962 EVC2Q86UK5 1308 aa23.41■■□□□ 1.34
CROCCP2-202ENST00000412962 SLC12A5Q9H2X9 1139 aa23.41■■□□□ 1.34
CROCCP2-202ENST00000412962 ADAMTS8Q9UP79 889 aa23.41■■□□□ 1.34
CROCCP2-202ENST00000412962 NSD3Q9BZ95 1437 aa23.4■■□□□ 1.34
CROCCP2-202ENST00000412962 WDR43Q15061 677 aaKnown RBP eCLIP23.4■■□□□ 1.344e-8■■■■□ 21.4
CROCCP2-202ENST00000412962 SAFB2Q14151 953 aaKnown RBP eCLIP23.39■■□□□ 1.34
CROCCP2-202ENST00000412962 A2ML1A8K2U0 1454 aa23.39■■□□□ 1.33
CROCCP2-202ENST00000412962 RNF123Q5XPI4 1314 aa23.38■■□□□ 1.33
CROCCP2-202ENST00000412962 ALKQ9UM73 1620 aa23.38■■□□□ 1.33
CROCCP2-202ENST00000412962 PPP4R2Q9NY27 417 aa23.38■■□□□ 1.33
CROCCP2-202ENST00000412962 PDE3BQ13370 1112 aa23.37■■□□□ 1.33
CROCCP2-202ENST00000412962 ESF1Q9H501 851 aaKnown RBP23.37■■□□□ 1.33
CROCCP2-202ENST00000412962 YTHDC2Q9H6S0 1430 aaKnown RBP23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms