RNA–Protein interactions for RNA: ENST00000412827.6

PUDP-202, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 2 BASIC

Gene PUDP, Length 1,376 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-202ENST00000412827 EID1Q9Y6B2 187 aa21.67■■□□□ 1.06
PUDP-202ENST00000412827 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.66■■□□□ 1.06
PUDP-202ENST00000412827 RIMS2Q9UQ26 1411 aa21.65■■□□□ 1.06
PUDP-202ENST00000412827 SCAF11Q99590 1463 aaKnown RBP21.64■■□□□ 1.06
PUDP-202ENST00000412827 MYO5BQ9ULV0 1848 aa21.64■■□□□ 1.05
PUDP-202ENST00000412827 ANKLE2Q86XL3 938 aa21.63■■□□□ 1.05
PUDP-202ENST00000412827 ZFYVE9O95405 1425 aa21.63■■□□□ 1.05
PUDP-202ENST00000412827 POLR1AO95602 1720 aaPredicted RBP21.62■■□□□ 1.05
PUDP-202ENST00000412827 HSPA2P54652 639 aa21.61■■□□□ 1.05
PUDP-202ENST00000412827 NEXMIFQ5QGS0 1516 aa21.61■■□□□ 1.05
PUDP-202ENST00000412827 RGL3Q3MIN7 710 aa21.61■■□□□ 1.05
PUDP-202ENST00000412827 STAC3Q96MF2 364 aa21.6■■□□□ 1.05
PUDP-202ENST00000412827 TXNDC2Q86VQ3 553 aa21.59■■□□□ 1.05
PUDP-202ENST00000412827 MYOM2P54296 1465 aa21.59■■□□□ 1.05
PUDP-202ENST00000412827 ZNF316A6NFI3 1004 aaPredicted RBP21.58■■□□□ 1.04
PUDP-202ENST00000412827 PPLO60437 1756 aa21.57■■□□□ 1.04
PUDP-202ENST00000412827 VGFO15240 615 aaPredicted RBP21.57■■□□□ 1.04
PUDP-202ENST00000412827 IFT172Q9UG01 1749 aa21.56■■□□□ 1.04
PUDP-202ENST00000412827 MED14O60244 1454 aa21.55■■□□□ 1.04
PUDP-202ENST00000412827 L3MBTL2Q969R5 705 aa21.55■■□□□ 1.04
PUDP-202ENST00000412827 PLEKHG1Q9ULL1 1385 aa21.55■■□□□ 1.04
PUDP-202ENST00000412827 DMRT2Q9Y5R5 561 aa21.54■■□□□ 1.04
PUDP-202ENST00000412827 NPHP4O75161 1426 aaPredicted RBP21.54■■□□□ 1.04
PUDP-202ENST00000412827 IQGAP1P46940 1657 aa21.52■■□□□ 1.04
PUDP-202ENST00000412827 LTKP29376 864 aa21.51■■□□□ 1.03
PUDP-202ENST00000412827 DCAF11Q8TEB1 546 aa21.51■■□□□ 1.03
PUDP-202ENST00000412827 BCANQ96GW7 911 aa21.51■■□□□ 1.03
PUDP-202ENST00000412827 DIP2AQ14689 1571 aa21.51■■□□□ 1.03
PUDP-202ENST00000412827 NCKAP5LQ9HCH0 1330 aa21.5■■□□□ 1.03
PUDP-202ENST00000412827 SETBP1Q9Y6X0 1596 aa21.5■■□□□ 1.03
PUDP-202ENST00000412827 STRCQ7RTU9 1775 aa21.49■■□□□ 1.03
PUDP-202ENST00000412827 NRXN1Q9ULB1 1477 aa21.48■■□□□ 1.03
PUDP-202ENST00000412827 NUTM2DQ5VT03 806 aaPredicted RBP21.48■■□□□ 1.03
PUDP-202ENST00000412827 PIK3C2GO75747 1445 aa21.47■■□□□ 1.03
PUDP-202ENST00000412827 LAMC1P11047 1609 aa21.47■■□□□ 1.03
PUDP-202ENST00000412827 KDM2AQ9Y2K7 1162 aa21.45■■□□□ 1.02
PUDP-202ENST00000412827 ADGRF5Q8IZF2 1346 aa21.43■■□□□ 1.02
PUDP-202ENST00000412827 PRAG1Q86YV5 1406 aa21.42■■□□□ 1.02
PUDP-202ENST00000412827 NRXN3Q9Y4C0 1643 aa21.41■■□□□ 1.02
PUDP-202ENST00000412827 ADAMTS13Q76LX8 1427 aa21.41■■□□□ 1.02
PUDP-202ENST00000412827 PIK3R4Q99570 1358 aa21.4■■□□□ 1.02
PUDP-202ENST00000412827 TBX22Q9Y458 520 aa21.39■■□□□ 1.02
PUDP-202ENST00000412827 ALKQ9UM73 1620 aa21.38■■□□□ 1.01
PUDP-202ENST00000412827 KIAA1210Q9ULL0 1709 aa21.37■■□□□ 1.01
PUDP-202ENST00000412827 SLC26A8Q96RN1 970 aa21.36■■□□□ 1.01
PUDP-202ENST00000412827 RALGAPBQ86X10 1494 aa21.35■■□□□ 1.01
PUDP-202ENST00000412827 NBPF8Q3BBV2 869 aa21.35■■□□□ 1.01
PUDP-202ENST00000412827 C14orf93Q9H972 538 aaKnown RBP21.35■■□□□ 1.01
PUDP-202ENST00000412827 SENP3Q9H4L4 574 aaPredicted RBP21.34■■□□□ 1.01
PUDP-202ENST00000412827 SETD1AO15047 1707 aaKnown RBP21.34■■□□□ 1.01
PUDP-202ENST00000412827 NWD1Q149M9 1564 aa21.32■■□□□ 1
PUDP-202ENST00000412827 EIF4G2P78344 907 aaKnown RBP eCLIP21.31■■□□□ 1
PUDP-202ENST00000412827 NKTRP30414 1462 aaKnown RBP21.31■■□□□ 1
PUDP-202ENST00000412827 TRPM1Q7Z4N2 1603 aa21.3■■□□□ 1
PUDP-202ENST00000412827 CFAP70Q5T0N1 1121 aa21.3■■□□□ 1
PUDP-202ENST00000412827 ROCK2O75116 1388 aaKnown RBP21.29■■□□□ 1
PUDP-202ENST00000412827 ADGRB1O14514 1584 aa21.28■■□□□ 1
PUDP-202ENST00000412827 METP08581 1390 aa21.28■■□□□ 1
PUDP-202ENST00000412827 CPS1P31327 1500 aa21.28■■□□□ 1
PUDP-202ENST00000412827 ASXL1Q8IXJ9 1541 aa21.28■■□□□ 1
PUDP-202ENST00000412827 KCNA6P17658 529 aa21.27■■□□□ 1
PUDP-202ENST00000412827 XRN1Q8IZH2 1706 aaKnown RBP21.27■■□□□ 1
PUDP-202ENST00000412827 LRPPRCP42704 1394 aaKnown RBP21.26■□□□□ 0.99
PUDP-202ENST00000412827 PTCH1Q13635 1447 aa21.26■□□□□ 0.99
PUDP-202ENST00000412827 YTHDC2Q9H6S0 1430 aaKnown RBP21.26■□□□□ 0.99
PUDP-202ENST00000412827 DIEXFQ68CQ4 756 aaKnown RBP21.25■□□□□ 0.99
PUDP-202ENST00000412827 CHD2O14647 1828 aaKnown RBP21.25■□□□□ 0.99
PUDP-202ENST00000412827 TECPR2O15040 1411 aa21.25■□□□□ 0.99
PUDP-202ENST00000412827 KNDC1Q76NI1 1749 aa21.25■□□□□ 0.99
PUDP-202ENST00000412827 GPRASP1Q5JY77 1395 aa21.25■□□□□ 0.99
PUDP-202ENST00000412827 ZNF335Q9H4Z2 1342 aaPredicted RBP21.23■□□□□ 0.99
PUDP-202ENST00000412827 AMOTL2Q9Y2J4 779 aa21.23■□□□□ 0.99
PUDP-202ENST00000412827 EIF3AQ14152 1382 aaKnown RBP21.22■□□□□ 0.99
PUDP-202ENST00000412827 ABCC11Q96J66 1382 aa21.22■□□□□ 0.99
PUDP-202ENST00000412827 DLC1Q96QB1 1528 aa21.22■□□□□ 0.99
PUDP-202ENST00000412827 TMEM132EQ6IEE7 984 aa21.22■□□□□ 0.99
PUDP-202ENST00000412827 PTPRUQ92729 1446 aa21.21■□□□□ 0.99
PUDP-202ENST00000412827 HSPA5P11021 654 aaKnown RBP21.2■□□□□ 0.98
PUDP-202ENST00000412827 FAM135BQ49AJ0 1406 aa21.19■□□□□ 0.98
PUDP-202ENST00000412827 CARD11Q9BXL7 1154 aa21.19■□□□□ 0.98
PUDP-202ENST00000412827 NBPF1Q3BBV0 1214 aa21.18■□□□□ 0.98
PUDP-202ENST00000412827 STK26Q9P289 416 aa21.18■□□□□ 0.98
PUDP-202ENST00000412827 LTBP4Q8N2S1 1624 aa21.17■□□□□ 0.98
PUDP-202ENST00000412827 USP47Q96K76 1375 aa21.16■□□□□ 0.98
PUDP-202ENST00000412827 SIRT1Q96EB6 747 aa21.16■□□□□ 0.98
PUDP-202ENST00000412827 NCOA3Q9Y6Q9 1424 aa21.16■□□□□ 0.98
PUDP-202ENST00000412827 STRCP1A6NGW2 1772 aa21.15■□□□□ 0.98
PUDP-202ENST00000412827 PROSER2Q86WR7 435 aaPredicted RBP21.14■□□□□ 0.98
PUDP-202ENST00000412827 TRAK1Q9UPV9 953 aa21.14■□□□□ 0.98
PUDP-202ENST00000412827 ARHGEF28Q8N1W1 1705 aaKnown RBP21.14■□□□□ 0.97
PUDP-202ENST00000412827 ROBO2Q9HCK4 1378 aa21.13■□□□□ 0.97
PUDP-202ENST00000412827 LRRC7Q96NW7 1537 aa21.13■□□□□ 0.97
PUDP-202ENST00000412827 POGKQ9P215 609 aa21.12■□□□□ 0.97
PUDP-202ENST00000412827 TMEM94Q12767 1356 aa21.12■□□□□ 0.97
PUDP-202ENST00000412827 C14orf37Q86TY3 774 aa21.11■□□□□ 0.97
PUDP-202ENST00000412827 IQSEC2Q5JU85 1478 aa21.11■□□□□ 0.97
PUDP-202ENST00000412827 PRAM1Q96QH2 718 aa21.1■□□□□ 0.97
PUDP-202ENST00000412827 CENPJQ9HC77 1338 aaPredicted RBP21.09■□□□□ 0.97
PUDP-202ENST00000412827 ADGRL3Q9HAR2 1447 aa21.09■□□□□ 0.97
PUDP-202ENST00000412827 MSH6P52701 1360 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms