RNA–Protein interactions for RNA: ENST00000412466.1

PMS2P4-201, Transcript of PMS1 homolog 2, mismatch repair system component pseudogene 4, humanhuman

BASIC

Gene PMS2P4, Length 1,052 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P4-201ENST00000412466 IDI1Q13907 227 aa24.93■■□□□ 1.58
PMS2P4-201ENST00000412466 HRCP23327 699 aa24.92■■□□□ 1.58
PMS2P4-201ENST00000412466 TET3O43151 1660 aa24.91■■□□□ 1.58
PMS2P4-201ENST00000412466 SLC52A1Q9NWF4 448 aa24.9■■□□□ 1.58
PMS2P4-201ENST00000412466 NKTRP30414 1462 aaKnown RBP24.89■■□□□ 1.58
PMS2P4-201ENST00000412466 UNC13BO14795 1591 aa24.89■■□□□ 1.58
PMS2P4-201ENST00000412466 NWD1Q149M9 1564 aa24.88■■□□□ 1.57
PMS2P4-201ENST00000412466 TMEM94Q12767 1356 aa24.88■■□□□ 1.57
PMS2P4-201ENST00000412466 KCNA6P17658 529 aa24.87■■□□□ 1.57
PMS2P4-201ENST00000412466 FAM135BQ49AJ0 1406 aa24.85■■□□□ 1.57
PMS2P4-201ENST00000412466 BCANQ96GW7 911 aa24.84■■□□□ 1.57
PMS2P4-201ENST00000412466 SLC26A8Q96RN1 970 aa24.84■■□□□ 1.57
PMS2P4-201ENST00000412466 NUP155O75694 1391 aa24.83■■□□□ 1.57
PMS2P4-201ENST00000412466 RAB3GAP2Q9H2M9 1393 aa24.83■■□□□ 1.57
PMS2P4-201ENST00000412466 MYO5BQ9ULV0 1848 aa24.82■■□□□ 1.56
PMS2P4-201ENST00000412466 PROSER2Q86WR7 435 aaPredicted RBP24.82■■□□□ 1.56
PMS2P4-201ENST00000412466 ROBO1Q9Y6N7 1651 aa24.81■■□□□ 1.56
PMS2P4-201ENST00000412466 IQGAP3Q86VI3 1631 aa24.81■■□□□ 1.56
PMS2P4-201ENST00000412466 PPP1R15AO75807 674 aaPredicted RBP24.8■■□□□ 1.56
PMS2P4-201ENST00000412466 HDGFP51858 240 aaKnown RBP24.8■■□□□ 1.56
PMS2P4-201ENST00000412466 TRIM52Q96A61 297 aa24.8■■□□□ 1.56
PMS2P4-201ENST00000412466 PCGF6Q9BYE7 350 aa24.79■■□□□ 1.56
PMS2P4-201ENST00000412466 TMEM131LA2VDJ0 1609 aa24.79■■□□□ 1.56
PMS2P4-201ENST00000412466 MSH6P52701 1360 aa24.79■■□□□ 1.56
PMS2P4-201ENST00000412466 PLEKHG1Q9ULL1 1385 aa24.79■■□□□ 1.56
PMS2P4-201ENST00000412466 ZFYVE9O95405 1425 aa24.78■■□□□ 1.56
PMS2P4-201ENST00000412466 RIMS2Q9UQ26 1411 aa24.78■■□□□ 1.56
PMS2P4-201ENST00000412466 CHD2O14647 1828 aaKnown RBP24.75■■□□□ 1.55
PMS2P4-201ENST00000412466 E9PCH4 1651 aa24.75■■□□□ 1.55
PMS2P4-201ENST00000412466 DIP2AQ14689 1571 aa24.73■■□□□ 1.55
PMS2P4-201ENST00000412466 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.72■■□□□ 1.55
PMS2P4-201ENST00000412466 CHGAP10645 457 aaKnown RBP24.7■■□□□ 1.54
PMS2P4-201ENST00000412466 RBM33Q96EV2 1170 aaKnown RBP24.7■■□□□ 1.54
PMS2P4-201ENST00000412466 SLC4A1APQ9BWU0 796 aaKnown RBP24.7■■□□□ 1.54
PMS2P4-201ENST00000412466 PHLPP1O60346 1717 aa24.69■■□□□ 1.54
PMS2P4-201ENST00000412466 MPHOSPH9Q99550 1183 aa24.66■■□□□ 1.54
PMS2P4-201ENST00000412466 NCOA3Q9Y6Q9 1424 aa24.66■■□□□ 1.54
PMS2P4-201ENST00000412466 TBX22Q9Y458 520 aa24.65■■□□□ 1.54
PMS2P4-201ENST00000412466 PIK3R4Q99570 1358 aa24.64■■□□□ 1.53
PMS2P4-201ENST00000412466 TRPM2O94759 1503 aa24.63■■□□□ 1.53
PMS2P4-201ENST00000412466 C14orf37Q86TY3 774 aa24.63■■□□□ 1.53
PMS2P4-201ENST00000412466 SLAIN2Q9P270 581 aa24.63■■□□□ 1.53
PMS2P4-201ENST00000412466 RGS17Q9UGC6 210 aaPredicted RBP24.62■■□□□ 1.53
PMS2P4-201ENST00000412466 JCADQ9P266 1359 aa24.61■■□□□ 1.53
PMS2P4-201ENST00000412466 ADAMTS13Q76LX8 1427 aa24.61■■□□□ 1.53
PMS2P4-201ENST00000412466 SPHKAPQ2M3C7 1700 aa24.58■■□□□ 1.53
PMS2P4-201ENST00000412466 COL16A1Q07092 1604 aaPredicted RBP24.58■■□□□ 1.53
PMS2P4-201ENST00000412466 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.57■■□□□ 1.52
PMS2P4-201ENST00000412466 NUTM2DQ5VT03 806 aaPredicted RBP24.56■■□□□ 1.52
PMS2P4-201ENST00000412466 CADPS2Q86UW7 1296 aa24.55■■□□□ 1.52
PMS2P4-201ENST00000412466 AHDC1Q5TGY3 1603 aaPredicted RBP24.53■■□□□ 1.52
PMS2P4-201ENST00000412466 ATF3P18847 181 aa24.53■■□□□ 1.52
PMS2P4-201ENST00000412466 POTEAQ6S8J7 498 aa24.51■■□□□ 1.51
PMS2P4-201ENST00000412466 C19orf44Q9H6X5 657 aa24.51■■□□□ 1.51
PMS2P4-201ENST00000412466 SETBP1Q9Y6X0 1596 aa24.5■■□□□ 1.51
PMS2P4-201ENST00000412466 SHPRHQ149N8 1683 aa24.5■■□□□ 1.51
PMS2P4-201ENST00000412466 XRN1Q8IZH2 1706 aaKnown RBP24.49■■□□□ 1.51
PMS2P4-201ENST00000412466 DCCP43146 1447 aa24.49■■□□□ 1.51
PMS2P4-201ENST00000412466 SPATA31A6Q5VVP1 1343 aa24.48■■□□□ 1.51
PMS2P4-201ENST00000412466 NRXN3Q9Y4C0 1643 aa24.48■■□□□ 1.51
PMS2P4-201ENST00000412466 AMOTL2Q9Y2J4 779 aa24.47■■□□□ 1.51
PMS2P4-201ENST00000412466 FOXD1Q16676 465 aa24.46■■□□□ 1.51
PMS2P4-201ENST00000412466 ZNF326Q5BKZ1 582 aaKnown RBP24.46■■□□□ 1.51
PMS2P4-201ENST00000412466 PTPRUQ92729 1446 aa24.45■■□□□ 1.51
PMS2P4-201ENST00000412466 MEX3CQ5U5Q3 659 aaKnown RBP24.45■■□□□ 1.5
PMS2P4-201ENST00000412466 SETD1AO15047 1707 aaKnown RBP24.44■■□□□ 1.5
PMS2P4-201ENST00000412466 DHX57Q6P158 1386 aaKnown RBP24.43■■□□□ 1.5
PMS2P4-201ENST00000412466 LRP6O75581 1613 aa24.42■■□□□ 1.5
PMS2P4-201ENST00000412466 CLTCL1P53675 1640 aa24.42■■□□□ 1.5
PMS2P4-201ENST00000412466 KIF1BO60333 1816 aa24.42■■□□□ 1.5
PMS2P4-201ENST00000412466 ANKRD30BQ9BXX2 1392 aa24.42■■□□□ 1.5
PMS2P4-201ENST00000412466 CCDC144AA2RUR9 1427 aa24.41■■□□□ 1.5
PMS2P4-201ENST00000412466 ASXL1Q8IXJ9 1541 aa24.4■■□□□ 1.5
PMS2P4-201ENST00000412466 NEXMIFQ5QGS0 1516 aa24.39■■□□□ 1.49
PMS2P4-201ENST00000412466 ZNF772Q68DY9 489 aaPredicted RBP24.38■■□□□ 1.49
PMS2P4-201ENST00000412466 BRINP3Q76B58 766 aa24.38■■□□□ 1.49
PMS2P4-201ENST00000412466 NHSL1Q5SYE7 1610 aa24.37■■□□□ 1.49
PMS2P4-201ENST00000412466 MST1RQ04912 1400 aa24.35■■□□□ 1.49
PMS2P4-201ENST00000412466 ADGRL3Q9HAR2 1447 aa24.35■■□□□ 1.49
PMS2P4-201ENST00000412466 NALCNQ8IZF0 1738 aa24.34■■□□□ 1.49
PMS2P4-201ENST00000412466 CLSPNQ9HAW4 1339 aa24.34■■□□□ 1.49
PMS2P4-201ENST00000412466 METP08581 1390 aa24.33■■□□□ 1.49
PMS2P4-201ENST00000412466 PTCH1Q13635 1447 aa24.27■■□□□ 1.48
PMS2P4-201ENST00000412466 NUTM2BA6NNL0 878 aaPredicted RBP24.27■■□□□ 1.48
PMS2P4-201ENST00000412466 NUTM2EB1AL46 878 aaPredicted RBP24.27■■□□□ 1.48
PMS2P4-201ENST00000412466 NUTM2AQ8IVF1 878 aaPredicted RBP24.27■■□□□ 1.48
PMS2P4-201ENST00000412466 CCER1Q8TC90 406 aaPredicted RBP24.26■■□□□ 1.47
PMS2P4-201ENST00000412466 LRRC59Q96AG4 307 aaKnown RBP24.25■■□□□ 1.47
PMS2P4-201ENST00000412466 RPGRIP1LQ68CZ1 1315 aa24.25■■□□□ 1.47
PMS2P4-201ENST00000412466 VGFO15240 615 aaPredicted RBP24.24■■□□□ 1.47
PMS2P4-201ENST00000412466 SPATA31E1Q6ZUB1 1445 aa24.23■■□□□ 1.47
PMS2P4-201ENST00000412466 CDK12Q9NYV4 1490 aaPredicted RBP24.23■■□□□ 1.47
PMS2P4-201ENST00000412466 RXRBP28702 533 aa24.22■■□□□ 1.47
PMS2P4-201ENST00000412466 PPLO60437 1756 aa24.21■■□□□ 1.47
PMS2P4-201ENST00000412466 C1orf167Q5SNV9 1468 aa24.2■■□□□ 1.47
PMS2P4-201ENST00000412466 PRAG1Q86YV5 1406 aa24.2■■□□□ 1.46
PMS2P4-201ENST00000412466 AFF2P51816 1311 aa24.2■■□□□ 1.46
PMS2P4-201ENST00000412466 STAC3Q96MF2 364 aa24.2■■□□□ 1.46
PMS2P4-201ENST00000412466 PNPLA6Q8IY17 1366 aa24.19■■□□□ 1.46
PMS2P4-201ENST00000412466 LAMC1P11047 1609 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms