RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 CHGAP10645 457 aaKnown RBP19.52■□□□□ 0.72
HDAC8-210ENST00000412342 EID1Q9Y6B2 187 aa19.52■□□□□ 0.72
HDAC8-210ENST00000412342 STRCP1A6NGW2 1772 aa19.51■□□□□ 0.71
HDAC8-210ENST00000412342 CCDC144AA2RUR9 1427 aa19.51■□□□□ 0.71
HDAC8-210ENST00000412342 SPATA31E1Q6ZUB1 1445 aa19.5■□□□□ 0.71
HDAC8-210ENST00000412342 ZNF335Q9H4Z2 1342 aaPredicted RBP19.5■□□□□ 0.71
HDAC8-210ENST00000412342 ANKRD30BQ9BXX2 1392 aa19.49■□□□□ 0.71
HDAC8-210ENST00000412342 PLEKHG1Q9ULL1 1385 aa19.49■□□□□ 0.71
HDAC8-210ENST00000412342 NRXN3Q9Y4C0 1643 aa19.49■□□□□ 0.71
HDAC8-210ENST00000412342 PPLO60437 1756 aa19.49■□□□□ 0.71
HDAC8-210ENST00000412342 IFT172Q9UG01 1749 aa19.48■□□□□ 0.71
HDAC8-210ENST00000412342 SETBP1Q9Y6X0 1596 aa19.45■□□□□ 0.7
HDAC8-210ENST00000412342 ADAMTS13Q76LX8 1427 aa19.45■□□□□ 0.7
HDAC8-210ENST00000412342 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.45■□□□□ 0.7
HDAC8-210ENST00000412342 DIP2AQ14689 1571 aa19.44■□□□□ 0.7
HDAC8-210ENST00000412342 CPS1P31327 1500 aa19.43■□□□□ 0.7
HDAC8-210ENST00000412342 HDGFP51858 240 aaKnown RBP19.43■□□□□ 0.7
HDAC8-210ENST00000412342 NUTM2DQ5VT03 806 aaPredicted RBP19.43■□□□□ 0.7
HDAC8-210ENST00000412342 NWD1Q149M9 1564 aa19.43■□□□□ 0.7
HDAC8-210ENST00000412342 ZNF326Q5BKZ1 582 aaKnown RBP19.42■□□□□ 0.7
HDAC8-210ENST00000412342 PPP1R15AO75807 674 aaPredicted RBP19.41■□□□□ 0.7
HDAC8-210ENST00000412342 CERKQ8TCT0 537 aa19.41■□□□□ 0.7
HDAC8-210ENST00000412342 SETD1AO15047 1707 aaKnown RBP19.41■□□□□ 0.7
HDAC8-210ENST00000412342 CHD2O14647 1828 aaKnown RBP19.41■□□□□ 0.7
HDAC8-210ENST00000412342 IQSEC2Q5JU85 1478 aa19.41■□□□□ 0.7
HDAC8-210ENST00000412342 SLC26A8Q96RN1 970 aa19.4■□□□□ 0.7
HDAC8-210ENST00000412342 RPGRIP1LQ68CZ1 1315 aa19.4■□□□□ 0.7
HDAC8-210ENST00000412342 XIRP1Q702N8 1843 aaKnown RBP19.37■□□□□ 0.69
HDAC8-210ENST00000412342 LRRC7Q96NW7 1537 aa19.36■□□□□ 0.69
HDAC8-210ENST00000412342 DHX57Q6P158 1386 aaKnown RBP19.36■□□□□ 0.69
HDAC8-210ENST00000412342 SENP3Q9H4L4 574 aaPredicted RBP19.36■□□□□ 0.69
HDAC8-210ENST00000412342 TBX22Q9Y458 520 aa19.36■□□□□ 0.69
HDAC8-210ENST00000412342 NKTRP30414 1462 aaKnown RBP19.34■□□□□ 0.69
HDAC8-210ENST00000412342 XRN1Q8IZH2 1706 aaKnown RBP19.34■□□□□ 0.69
HDAC8-210ENST00000412342 PIK3R4Q99570 1358 aa19.33■□□□□ 0.69
HDAC8-210ENST00000412342 RGL3Q3MIN7 710 aa19.33■□□□□ 0.68
HDAC8-210ENST00000412342 MYOM2P54296 1465 aa19.33■□□□□ 0.68
HDAC8-210ENST00000412342 NRXN1Q9ULB1 1477 aa19.33■□□□□ 0.68
HDAC8-210ENST00000412342 VGFO15240 615 aaPredicted RBP19.32■□□□□ 0.68
HDAC8-210ENST00000412342 KCNA6P17658 529 aa19.32■□□□□ 0.68
HDAC8-210ENST00000412342 BCANQ96GW7 911 aa19.32■□□□□ 0.68
HDAC8-210ENST00000412342 PTPRUQ92729 1446 aa19.32■□□□□ 0.68
HDAC8-210ENST00000412342 ALKQ9UM73 1620 aa19.32■□□□□ 0.68
HDAC8-210ENST00000412342 ADGRF5Q8IZF2 1346 aa19.31■□□□□ 0.68
HDAC8-210ENST00000412342 PIK3C2GO75747 1445 aa19.3■□□□□ 0.68
HDAC8-210ENST00000412342 METP08581 1390 aa19.3■□□□□ 0.68
HDAC8-210ENST00000412342 ASXL1Q8IXJ9 1541 aa19.28■□□□□ 0.68
HDAC8-210ENST00000412342 FBXO41Q8TF61 875 aa19.26■□□□□ 0.67
HDAC8-210ENST00000412342 LAMC1P11047 1609 aa19.25■□□□□ 0.67
HDAC8-210ENST00000412342 PRAG1Q86YV5 1406 aa19.25■□□□□ 0.67
HDAC8-210ENST00000412342 TMEM94Q12767 1356 aa19.24■□□□□ 0.67
HDAC8-210ENST00000412342 PCGF6Q9BYE7 350 aa19.24■□□□□ 0.67
HDAC8-210ENST00000412342 ILDR1Q86SU0 546 aaPredicted RBP19.21■□□□□ 0.67
HDAC8-210ENST00000412342 AMOTL2Q9Y2J4 779 aa19.21■□□□□ 0.67
HDAC8-210ENST00000412342 KNDC1Q76NI1 1749 aa19.2■□□□□ 0.66
HDAC8-210ENST00000412342 SIN3AQ96ST3 1273 aa19.2■□□□□ 0.66
HDAC8-210ENST00000412342 PROSER2Q86WR7 435 aaPredicted RBP19.19■□□□□ 0.66
HDAC8-210ENST00000412342 PTCH1Q13635 1447 aa19.18■□□□□ 0.66
HDAC8-210ENST00000412342 NCOA3Q9Y6Q9 1424 aa19.18■□□□□ 0.66
HDAC8-210ENST00000412342 RBM33Q96EV2 1170 aaKnown RBP19.18■□□□□ 0.66
HDAC8-210ENST00000412342 C14orf93Q9H972 538 aaKnown RBP19.18■□□□□ 0.66
HDAC8-210ENST00000412342 ADGRB1O14514 1584 aa19.18■□□□□ 0.66
HDAC8-210ENST00000412342 DCAF11Q8TEB1 546 aa19.17■□□□□ 0.66
HDAC8-210ENST00000412342 STAC3Q96MF2 364 aa19.17■□□□□ 0.66
HDAC8-210ENST00000412342 TECPR2O15040 1411 aa19.17■□□□□ 0.66
HDAC8-210ENST00000412342 NALCNQ8IZF0 1738 aa19.16■□□□□ 0.66
HDAC8-210ENST00000412342 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.15■□□□□ 0.66
HDAC8-210ENST00000412342 ROBO2Q9HCK4 1378 aa19.15■□□□□ 0.66
HDAC8-210ENST00000412342 KIAA1210Q9ULL0 1709 aa19.14■□□□□ 0.66
HDAC8-210ENST00000412342 UBAP1LF5GYI3 381 aa19.14■□□□□ 0.65
HDAC8-210ENST00000412342 CFAP70Q5T0N1 1121 aa19.14■□□□□ 0.65
HDAC8-210ENST00000412342 LRPPRCP42704 1394 aaKnown RBP19.14■□□□□ 0.65
HDAC8-210ENST00000412342 KDM2AQ9Y2K7 1162 aa19.13■□□□□ 0.65
HDAC8-210ENST00000412342 YTHDC2Q9H6S0 1430 aaKnown RBP19.13■□□□□ 0.65
HDAC8-210ENST00000412342 TMEM132EQ6IEE7 984 aa19.12■□□□□ 0.65
HDAC8-210ENST00000412342 ABCC11Q96J66 1382 aa19.11■□□□□ 0.65
HDAC8-210ENST00000412342 L3MBTL2Q969R5 705 aa19.11■□□□□ 0.65
HDAC8-210ENST00000412342 ADGRL3Q9HAR2 1447 aa19.1■□□□□ 0.65
HDAC8-210ENST00000412342 MSH6P52701 1360 aa19.1■□□□□ 0.65
HDAC8-210ENST00000412342 TOM1O60784 492 aa19.1■□□□□ 0.65
HDAC8-210ENST00000412342 NEUROD1Q13562 356 aa19.1■□□□□ 0.65
HDAC8-210ENST00000412342 DCCP43146 1447 aa19.08■□□□□ 0.65
HDAC8-210ENST00000412342 DLC1Q96QB1 1528 aa19.08■□□□□ 0.64
HDAC8-210ENST00000412342 TRPM1Q7Z4N2 1603 aa19.07■□□□□ 0.64
HDAC8-210ENST00000412342 FAM135BQ49AJ0 1406 aa19.06■□□□□ 0.64
HDAC8-210ENST00000412342 C19orf44Q9H6X5 657 aa19.05■□□□□ 0.64
HDAC8-210ENST00000412342 ARHGEF28Q8N1W1 1705 aaKnown RBP19.05■□□□□ 0.64
HDAC8-210ENST00000412342 PLEKHH1Q9ULM0 1364 aa19.05■□□□□ 0.64
HDAC8-210ENST00000412342 ROBO1Q9Y6N7 1651 aa19.05■□□□□ 0.64
HDAC8-210ENST00000412342 STK26Q9P289 416 aa19.04■□□□□ 0.64
HDAC8-210ENST00000412342 CDC42BPGQ6DT37 1551 aa19.03■□□□□ 0.64
HDAC8-210ENST00000412342 SIRT1Q96EB6 747 aa19.03■□□□□ 0.64
HDAC8-210ENST00000412342 PIP4K2BP78356 416 aa19.02■□□□□ 0.64
HDAC8-210ENST00000412342 C14orf37Q86TY3 774 aa19.02■□□□□ 0.64
HDAC8-210ENST00000412342 CLSPNQ9HAW4 1339 aa19.01■□□□□ 0.63
HDAC8-210ENST00000412342 MST1RQ04912 1400 aa19.01■□□□□ 0.63
HDAC8-210ENST00000412342 WAPLQ7Z5K2 1190 aa19.01■□□□□ 0.63
HDAC8-210ENST00000412342 CADPS2Q86UW7 1296 aa19■□□□□ 0.63
HDAC8-210ENST00000412342 TONSLQ96HA7 1378 aa19■□□□□ 0.63
HDAC8-210ENST00000412342 NBPF1Q3BBV0 1214 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms