RNA–Protein interactions for RNA: ENST00000412157.2

SNRNP35-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best) BASIC

Gene SNRNP35, Length 1,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-202ENST00000412157 CHGAP10645 457 aaKnown RBP16.39■□□□□ 0.21
SNRNP35-202ENST00000412157 SLC52A1Q9NWF4 448 aa16.38■□□□□ 0.21
SNRNP35-202ENST00000412157 HSPA5P11021 654 aaKnown RBP16.37■□□□□ 0.21
SNRNP35-202ENST00000412157 TMEM131LA2VDJ0 1609 aa16.37■□□□□ 0.21
SNRNP35-202ENST00000412157 ROCK2O75116 1388 aaKnown RBP16.37■□□□□ 0.21
SNRNP35-202ENST00000412157 DISP3Q9P2K9 1392 aa16.37■□□□□ 0.21
SNRNP35-202ENST00000412157 C3P01024 1663 aa16.37■□□□□ 0.21
SNRNP35-202ENST00000412157 DMRT2Q9Y5R5 561 aa16.35■□□□□ 0.21
SNRNP35-202ENST00000412157 USP47Q96K76 1375 aa16.35■□□□□ 0.21
SNRNP35-202ENST00000412157 HIRIP3Q9BW71 556 aaPredicted RBP16.34■□□□□ 0.21
SNRNP35-202ENST00000412157 CARD11Q9BXL7 1154 aa16.34■□□□□ 0.21
SNRNP35-202ENST00000412157 RPGRIP1LQ68CZ1 1315 aa16.34■□□□□ 0.21
SNRNP35-202ENST00000412157 ZMYM3Q14202 1370 aa16.34■□□□□ 0.21
SNRNP35-202ENST00000412157 NEXMIFQ5QGS0 1516 aa16.34■□□□□ 0.21
SNRNP35-202ENST00000412157 STRCQ7RTU9 1775 aa16.33■□□□□ 0.21
SNRNP35-202ENST00000412157 IQGAP1P46940 1657 aa16.33■□□□□ 0.2
SNRNP35-202ENST00000412157 KDM5AP29375 1690 aaKnown RBP16.32■□□□□ 0.2
SNRNP35-202ENST00000412157 GPRASP1Q5JY77 1395 aa16.32■□□□□ 0.2
SNRNP35-202ENST00000412157 FBXO31Q5XUX0 539 aaPredicted RBP16.32■□□□□ 0.2
SNRNP35-202ENST00000412157 NRXN1Q9ULB1 1477 aa16.31■□□□□ 0.2
SNRNP35-202ENST00000412157 IDI1Q13907 227 aa16.31■□□□□ 0.2
SNRNP35-202ENST00000412157 STAG3Q9UJ98 1225 aa16.29■□□□□ 0.2
SNRNP35-202ENST00000412157 TNRQ92752 1358 aa16.28■□□□□ 0.2
SNRNP35-202ENST00000412157 SETBP1Q9Y6X0 1596 aa16.27■□□□□ 0.2
SNRNP35-202ENST00000412157 SETD1BQ9UPS6 1966 aaKnown RBP16.27■□□□□ 0.19
SNRNP35-202ENST00000412157 UBR1Q8IWV7 1749 aa16.26■□□□□ 0.19
SNRNP35-202ENST00000412157 ILDR2Q71H61 639 aa16.26■□□□□ 0.19
SNRNP35-202ENST00000412157 PIK3C2GO75747 1445 aa16.26■□□□□ 0.19
SNRNP35-202ENST00000412157 ADGRF5Q8IZF2 1346 aa16.25■□□□□ 0.19
SNRNP35-202ENST00000412157 NBPF1Q3BBV0 1214 aa16.25■□□□□ 0.19
SNRNP35-202ENST00000412157 ZFYVE9O95405 1425 aa16.25■□□□□ 0.19
SNRNP35-202ENST00000412157 A2ML1A8K2U0 1454 aa16.24■□□□□ 0.19
SNRNP35-202ENST00000412157 NLRP1Q9C000 1473 aa16.24■□□□□ 0.19
SNRNP35-202ENST00000412157 VGFO15240 615 aaPredicted RBP16.24■□□□□ 0.19
SNRNP35-202ENST00000412157 SCAF11Q99590 1463 aaKnown RBP16.23■□□□□ 0.19
SNRNP35-202ENST00000412157 MYO3AQ8NEV4 1616 aa16.23■□□□□ 0.19
SNRNP35-202ENST00000412157 EIF3AQ14152 1382 aaKnown RBP16.22■□□□□ 0.19
SNRNP35-202ENST00000412157 CCDC7Q96M83 1385 aa16.22■□□□□ 0.19
SNRNP35-202ENST00000412157 SOCS7O14512 581 aa16.21■□□□□ 0.19
SNRNP35-202ENST00000412157 DDX10Q13206 875 aaKnown RBP16.21■□□□□ 0.19
SNRNP35-202ENST00000412157 WASHC2AQ641Q2 1341 aa16.19■□□□□ 0.18
SNRNP35-202ENST00000412157 RIMS2Q9UQ26 1411 aa16.19■□□□□ 0.18
SNRNP35-202ENST00000412157 ST20-MTHFSA0A0A6YYL1 179 aa16.19■□□□□ 0.18
SNRNP35-202ENST00000412157 CFAP70Q5T0N1 1121 aa16.19■□□□□ 0.18
SNRNP35-202ENST00000412157 LTBP4Q8N2S1 1624 aa16.18■□□□□ 0.18
SNRNP35-202ENST00000412157 ADGRB1O14514 1584 aa16.17■□□□□ 0.18
SNRNP35-202ENST00000412157 KIF7Q2M1P5 1343 aa16.17■□□□□ 0.18
SNRNP35-202ENST00000412157 ARHGEF28Q8N1W1 1705 aaKnown RBP16.16■□□□□ 0.18
SNRNP35-202ENST00000412157 QRICH2Q9H0J4 1663 aa16.16■□□□□ 0.18
SNRNP35-202ENST00000412157 NUTM2DQ5VT03 806 aaPredicted RBP16.16■□□□□ 0.18
SNRNP35-202ENST00000412157 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.16■□□□□ 0.18
SNRNP35-202ENST00000412157 C14orf93Q9H972 538 aaKnown RBP16.16■□□□□ 0.18
SNRNP35-202ENST00000412157 ZNF142P52746 1687 aaPredicted RBP16.15■□□□□ 0.18
SNRNP35-202ENST00000412157 SETD1AO15047 1707 aaKnown RBP16.15■□□□□ 0.18
SNRNP35-202ENST00000412157 HDGFP51858 240 aaKnown RBP16.15■□□□□ 0.18
SNRNP35-202ENST00000412157 IQSEC2Q5JU85 1478 aa16.15■□□□□ 0.18
SNRNP35-202ENST00000412157 C11orf95C9JLR9 678 aaPredicted RBP16.14■□□□□ 0.17
SNRNP35-202ENST00000412157 ALKQ9UM73 1620 aa16.14■□□□□ 0.17
SNRNP35-202ENST00000412157 CEP170BQ9Y4F5 1589 aaPredicted RBP16.13■□□□□ 0.17
SNRNP35-202ENST00000412157 POLR3GLQ9BT43 218 aa16.13■□□□□ 0.17
SNRNP35-202ENST00000412157 MIER1Q8N108 512 aa16.12■□□□□ 0.17
SNRNP35-202ENST00000412157 ASXL1Q8IXJ9 1541 aa16.12■□□□□ 0.17
SNRNP35-202ENST00000412157 NCKAP5LQ9HCH0 1330 aa16.12■□□□□ 0.17
SNRNP35-202ENST00000412157 NRXN3Q9Y4C0 1643 aa16.12■□□□□ 0.17
SNRNP35-202ENST00000412157 TMF1P82094 1093 aa16.11■□□□□ 0.17
SNRNP35-202ENST00000412157 TMEM2Q9UHN6 1383 aa16.11■□□□□ 0.17
SNRNP35-202ENST00000412157 SLC24A1O60721 1099 aa16.1■□□□□ 0.17
SNRNP35-202ENST00000412157 ZNF335Q9H4Z2 1342 aaPredicted RBP16.1■□□□□ 0.17
SNRNP35-202ENST00000412157 SLIT1O75093 1534 aa16.09■□□□□ 0.17
SNRNP35-202ENST00000412157 UBAP1LF5GYI3 381 aa16.09■□□□□ 0.17
SNRNP35-202ENST00000412157 TESK2Q96S53 571 aa16.09■□□□□ 0.17
SNRNP35-202ENST00000412157 KNDC1Q76NI1 1749 aa16.08■□□□□ 0.17
SNRNP35-202ENST00000412157 ANP32CO43423 234 aa16.08■□□□□ 0.16
SNRNP35-202ENST00000412157 SBNO2Q9Y2G9 1366 aa16.07■□□□□ 0.16
SNRNP35-202ENST00000412157 ARHGAP23Q9P227 1491 aa16.07■□□□□ 0.16
SNRNP35-202ENST00000412157 CENPJQ9HC77 1338 aaPredicted RBP16.06■□□□□ 0.16
SNRNP35-202ENST00000412157 CDCA8Q53HL2 280 aa16.06■□□□□ 0.16
SNRNP35-202ENST00000412157 TMEM132EQ6IEE7 984 aa16.06■□□□□ 0.16
SNRNP35-202ENST00000412157 TRAK1Q9UPV9 953 aa16.06■□□□□ 0.16
SNRNP35-202ENST00000412157 THEMISQ8N1K5 641 aaPredicted RBP16.05■□□□□ 0.16
SNRNP35-202ENST00000412157 EID1Q9Y6B2 187 aa16.05■□□□□ 0.16
SNRNP35-202ENST00000412157 YTHDC2Q9H6S0 1430 aaKnown RBP16.04■□□□□ 0.16
SNRNP35-202ENST00000412157 PLEKHG1Q9ULL1 1385 aa16.04■□□□□ 0.16
SNRNP35-202ENST00000412157 SCAF1Q9H7N4 1312 aaKnown RBP16.04■□□□□ 0.16
SNRNP35-202ENST00000412157 MYOM1P52179 1685 aa16.04■□□□□ 0.16
SNRNP35-202ENST00000412157 DLC1Q96QB1 1528 aa16.04■□□□□ 0.16
SNRNP35-202ENST00000412157 BCANQ96GW7 911 aa16.03■□□□□ 0.16
SNRNP35-202ENST00000412157 SENP3Q9H4L4 574 aaPredicted RBP16.03■□□□□ 0.16
SNRNP35-202ENST00000412157 DIP2AQ14689 1571 aa16.03■□□□□ 0.16
SNRNP35-202ENST00000412157 TXNDC2Q86VQ3 553 aa16■□□□□ 0.15
SNRNP35-202ENST00000412157 LRPPRCP42704 1394 aaKnown RBP16■□□□□ 0.15
SNRNP35-202ENST00000412157 STK26Q9P289 416 aa15.99■□□□□ 0.15
SNRNP35-202ENST00000412157 CPS1P31327 1500 aa15.99■□□□□ 0.15
SNRNP35-202ENST00000412157 ADAMTS13Q76LX8 1427 aa15.98■□□□□ 0.15
SNRNP35-202ENST00000412157 LTKP29376 864 aa15.97■□□□□ 0.15
SNRNP35-202ENST00000412157 PIP4K2BP78356 416 aa15.97■□□□□ 0.15
SNRNP35-202ENST00000412157 TULP4Q9NRJ4 1543 aa15.96■□□□□ 0.15
SNRNP35-202ENST00000412157 POGKQ9P215 609 aa15.96■□□□□ 0.15
SNRNP35-202ENST00000412157 ABCC11Q96J66 1382 aa15.95■□□□□ 0.14
SNRNP35-202ENST00000412157 EVC2Q86UK5 1308 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms