RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 CYP4X1Q8N118 509 aa2.27□□□□□ -2.05
RNU4-88P-201ENST00000411220 BCL2L12Q9HB09 334 aa2.27□□□□□ -2.05
RNU4-88P-201ENST00000411220 JAG2Q9Y219 1238 aa2.27□□□□□ -2.05
RNU4-88P-201ENST00000411220 RNF223E7ERA6 249 aa2.26□□□□□ -2.05
RNU4-88P-201ENST00000411220 PSEN1P49768 467 aa2.25□□□□□ -2.05
RNU4-88P-201ENST00000411220 NUBP1P53384 320 aa2.25□□□□□ -2.05
RNU4-88P-201ENST00000411220 ZNF467Q7Z7K2 595 aaPredicted RBP2.25□□□□□ -2.05
RNU4-88P-201ENST00000411220 CDKN2AIPQ9NXV6 580 aaPredicted RBP2.25□□□□□ -2.05
RNU4-88P-201ENST00000411220 RABGEF1Q9UJ41 708 aa2.25□□□□□ -2.05
RNU4-88P-201ENST00000411220 PTPREP23469 700 aa2.24□□□□□ -2.05
RNU4-88P-201ENST00000411220 FBLN7Q53RD9 439 aa2.24□□□□□ -2.05
RNU4-88P-201ENST00000411220 CNTNAP3BQ96NU0 1288 aa2.24□□□□□ -2.05
RNU4-88P-201ENST00000411220 CNTNAP3Q9BZ76 1288 aa2.24□□□□□ -2.05
RNU4-88P-201ENST00000411220 RNF114Q9Y508 228 aa2.24□□□□□ -2.05
RNU4-88P-201ENST00000411220 KRT76Q01546 638 aa2.23□□□□□ -2.05
RNU4-88P-201ENST00000411220 CABP2Q9NPB3 220 aa2.23□□□□□ -2.05
RNU4-88P-201ENST00000411220 NCANO14594 1321 aa2.22□□□□□ -2.05
RNU4-88P-201ENST00000411220 LRCH3Q96II8 777 aa2.22□□□□□ -2.05
RNU4-88P-201ENST00000411220 PRRG2O14669 202 aa2.21□□□□□ -2.06
RNU4-88P-201ENST00000411220 LRP8Q14114 963 aa2.21□□□□□ -2.06
RNU4-88P-201ENST00000411220 ANKLE1Q8NAG6 615 aa2.21□□□□□ -2.06
RNU4-88P-201ENST00000411220 WHAMMQ8TF30 809 aa2.21□□□□□ -2.06
RNU4-88P-201ENST00000411220 PPP4CP60510 307 aa2.2□□□□□ -2.06
RNU4-88P-201ENST00000411220 CSRNP1Q96S65 589 aa2.2□□□□□ -2.06
RNU4-88P-201ENST00000411220 KRTAP5-4Q6L8H1 288 aa2.19□□□□□ -2.06
RNU4-88P-201ENST00000411220 KRBA1A5PL33 1030 aa2.18□□□□□ -2.06
RNU4-88P-201ENST00000411220 BEND7Q8N7W2 519 aaPredicted RBP2.18□□□□□ -2.06
RNU4-88P-201ENST00000411220 CNTNAP5Q8WYK1 1306 aa2.17□□□□□ -2.06
RNU4-88P-201ENST00000411220 TTC24A2A3L6 582 aaPredicted RBP2.17□□□□□ -2.06
RNU4-88P-201ENST00000411220 PODNQ7Z5L7 613 aa2.16□□□□□ -2.06
RNU4-88P-201ENST00000411220 MIER1Q8N108 512 aa2.16□□□□□ -2.06
RNU4-88P-201ENST00000411220 HYAL3O43820 417 aaPredicted RBP2.15□□□□□ -2.07
RNU4-88P-201ENST00000411220 C2orf72A6NCS6 295 aa2.14□□□□□ -2.07
RNU4-88P-201ENST00000411220 KIF3CO14782 793 aa2.14□□□□□ -2.07
RNU4-88P-201ENST00000411220 SMPD1P17405 629 aa2.14□□□□□ -2.07
RNU4-88P-201ENST00000411220 MAP3K10Q02779 954 aa2.14□□□□□ -2.07
RNU4-88P-201ENST00000411220 KRTAP5-11Q6L8G4 156 aa2.14□□□□□ -2.07
RNU4-88P-201ENST00000411220 KRTAP5-1Q6L8H4 278 aa2.14□□□□□ -2.07
RNU4-88P-201ENST00000411220 ZNF865P0CJ78 1059 aaPredicted RBP2.13□□□□□ -2.07
RNU4-88P-201ENST00000411220 BUD31P41223 144 aaPredicted RBP2.13□□□□□ -2.07
RNU4-88P-201ENST00000411220 ZNF454Q8N9F8 522 aa2.13□□□□□ -2.07
RNU4-88P-201ENST00000411220 KRTAP4-4Q9BYR3 166 aa2.13□□□□□ -2.07
RNU4-88P-201ENST00000411220 B8ZZF3 427 aa2.12□□□□□ -2.07
RNU4-88P-201ENST00000411220 CIZ1Q9ULV3 898 aaPredicted RBP2.12□□□□□ -2.07
RNU4-88P-201ENST00000411220 IGHA2P01877 340 aa2.11□□□□□ -2.07
RNU4-88P-201ENST00000411220 PROX2Q3B8N5 592 aa2.11□□□□□ -2.07
RNU4-88P-201ENST00000411220 PTCD2Q8WV60 388 aaKnown RBP2.11□□□□□ -2.07
RNU4-88P-201ENST00000411220 ENAMQ9NRM1 1142 aa2.11□□□□□ -2.07
RNU4-88P-201ENST00000411220 PPEF1O14829 653 aaPredicted RBP2.1□□□□□ -2.07
RNU4-88P-201ENST00000411220 PDAP1Q13442 181 aaKnown RBP2.1□□□□□ -2.07
RNU4-88P-201ENST00000411220 DOC2BQ14184 412 aa2.1□□□□□ -2.07
RNU4-88P-201ENST00000411220 FAM98CQ17RN3 349 aaKnown RBP2.1□□□□□ -2.07
RNU4-88P-201ENST00000411220 SPOCD1Q6ZMY3 1216 aa2.1□□□□□ -2.07
RNU4-88P-201ENST00000411220 ALYREFQ86V81 257 aaKnown RBP2.1□□□□□ -2.07
RNU4-88P-201ENST00000411220 COL25A1Q9BXS0 654 aaPredicted RBP2.1□□□□□ -2.07
RNU4-88P-201ENST00000411220 SEPT9Q9UHD8 586 aaPredicted RBP2.1□□□□□ -2.07
RNU4-88P-201ENST00000411220 BMP1P13497 986 aa2.09□□□□□ -2.07
RNU4-88P-201ENST00000411220 IRAK1P51617 712 aa2.09□□□□□ -2.07
RNU4-88P-201ENST00000411220 TRIM46Q7Z4K8 759 aa2.09□□□□□ -2.07
RNU4-88P-201ENST00000411220 GPR161Q8N6U8 529 aaKnown RBP2.09□□□□□ -2.07
RNU4-88P-201ENST00000411220 ZPR1O75312 459 aa2.08□□□□□ -2.08
RNU4-88P-201ENST00000411220 HPS1Q92902 700 aa2.08□□□□□ -2.08
RNU4-88P-201ENST00000411220 ZBTB47Q9UFB7 747 aaPredicted RBP2.08□□□□□ -2.08
RNU4-88P-201ENST00000411220 SPDYE4A6NLX3 237 aa2.07□□□□□ -2.08
RNU4-88P-201ENST00000411220 PPFIA3O75145 1194 aa2.07□□□□□ -2.08
RNU4-88P-201ENST00000411220 TAL1P17542 331 aaPredicted RBP2.07□□□□□ -2.08
RNU4-88P-201ENST00000411220 COPS2P61201 443 aa2.07□□□□□ -2.08
RNU4-88P-201ENST00000411220 KIAA1468Q9P260 1216 aa2.07□□□□□ -2.08
RNU4-88P-201ENST00000411220 PPP1R3GB7ZBB8 358 aa2.06□□□□□ -2.08
RNU4-88P-201ENST00000411220 LYPD4Q6UWN0 246 aa2.06□□□□□ -2.08
RNU4-88P-201ENST00000411220 RNFT1Q5M7Z0 435 aa2.05□□□□□ -2.08
RNU4-88P-201ENST00000411220 PLA2G2CQ5R387 149 aa2.05□□□□□ -2.08
RNU4-88P-201ENST00000411220 SNIP1Q8TAD8 396 aaKnown RBP2.05□□□□□ -2.08
RNU4-88P-201ENST00000411220 C1QTNF9BB2RNN3 333 aa2.04□□□□□ -2.08
RNU4-88P-201ENST00000411220 C8AP07357 584 aa2.04□□□□□ -2.08
RNU4-88P-201ENST00000411220 J3QL48 77 aa2.03□□□□□ -2.08
RNU4-88P-201ENST00000411220 S1PR4O95977 384 aa2.03□□□□□ -2.08
RNU4-88P-201ENST00000411220 LILRA6Q6PI73 481 aa2.03□□□□□ -2.08
RNU4-88P-201ENST00000411220 EFCAB3Q8N7B9 438 aa2.03□□□□□ -2.08
RNU4-88P-201ENST00000411220 TBC1D12O60347 775 aa2.02□□□□□ -2.09
RNU4-88P-201ENST00000411220 CELA2BP08218 269 aaPredicted RBP2.02□□□□□ -2.09
RNU4-88P-201ENST00000411220 APLP1P51693 650 aa2.02□□□□□ -2.09
RNU4-88P-201ENST00000411220 FOSBP53539 338 aa2.02□□□□□ -2.09
RNU4-88P-201ENST00000411220 RSPO4Q2I0M5 234 aaPredicted RBP2.02□□□□□ -2.09
RNU4-88P-201ENST00000411220 ZFP42Q96MM3 310 aa2.02□□□□□ -2.09
RNU4-88P-201ENST00000411220 CD2BP2O95400 341 aaKnown RBP2.01□□□□□ -2.09
RNU4-88P-201ENST00000411220 SOBPA7XYQ1 873 aa2□□□□□ -2.09
RNU4-88P-201ENST00000411220 GSC2O15499 205 aa2□□□□□ -2.09
RNU4-88P-201ENST00000411220 ONECUT3O60422 494 aaPredicted RBP2□□□□□ -2.09
RNU4-88P-201ENST00000411220 RPIAP49247 311 aa2□□□□□ -2.09
RNU4-88P-201ENST00000411220 PRSS36Q5K4E3 855 aa2□□□□□ -2.09
RNU4-88P-201ENST00000411220 CD163Q86VB7 1156 aa2□□□□□ -2.09
RNU4-88P-201ENST00000411220 MS4A4AQ96JQ5 239 aa2□□□□□ -2.09
RNU4-88P-201ENST00000411220 ADAM33Q9BZ11 813 aa2□□□□□ -2.09
RNU4-88P-201ENST00000411220 SUV39H1O43463 412 aa1.99□□□□□ -2.09
RNU4-88P-201ENST00000411220 DYRK3O43781 588 aa1.99□□□□□ -2.09
RNU4-88P-201ENST00000411220 ADAMTS2O95450 1211 aa1.99□□□□□ -2.09
RNU4-88P-201ENST00000411220 ELNP15502 786 aa1.99□□□□□ -2.09
RNU4-88P-201ENST00000411220 NKAPLQ5M9Q1 402 aa1.99□□□□□ -2.09
RNU4-88P-201ENST00000411220 NEDD1Q8NHV4 660 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms