RNA–Protein interactions for RNA: ENST00000409808.6

LIMS2-207, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene LIMS2, Length 2,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-207ENST00000409808 GPRASP1Q5JY77 1395 aa27.03■■□□□ 1.92
LIMS2-207ENST00000409808 DNAJC5Q9H3Z4 198 aa27.03■■□□□ 1.92
LIMS2-207ENST00000409808 FBXO31Q5XUX0 539 aaPredicted RBP27.02■■□□□ 1.92
LIMS2-207ENST00000409808 ADGRB3O60242 1522 aa27.02■■□□□ 1.92
LIMS2-207ENST00000409808 POLR3GLQ9BT43 218 aa27.01■■□□□ 1.91
LIMS2-207ENST00000409808 ANP32EQ9BTT0 268 aa27.01■■□□□ 1.91
LIMS2-207ENST00000409808 CLTCQ00610 1675 aaKnown RBP27.01■■□□□ 1.91
LIMS2-207ENST00000409808 ADGRF5Q8IZF2 1346 aa27■■□□□ 1.91
LIMS2-207ENST00000409808 IFT172Q9UG01 1749 aa27■■□□□ 1.91
LIMS2-207ENST00000409808 PREX1Q8TCU6 1659 aa26.99■■□□□ 1.91
LIMS2-207ENST00000409808 PIK3C2BO00750 1634 aa26.98■■□□□ 1.91
LIMS2-207ENST00000409808 IDI1Q13907 227 aa26.98■■□□□ 1.91
LIMS2-207ENST00000409808 STAC3Q96MF2 364 aa26.97■■□□□ 1.91
LIMS2-207ENST00000409808 RBM19Q9Y4C8 960 aaKnown RBP26.97■■□□□ 1.91
LIMS2-207ENST00000409808 LAMC1P11047 1609 aa26.97■■□□□ 1.91
LIMS2-207ENST00000409808 ARID4BQ4LE39 1312 aaPredicted RBP26.95■■□□□ 1.91
LIMS2-207ENST00000409808 PPP6R1Q9UPN7 881 aa26.94■■□□□ 1.9
LIMS2-207ENST00000409808 MYOM2P54296 1465 aa26.93■■□□□ 1.9
LIMS2-207ENST00000409808 CFAP70Q5T0N1 1121 aa26.93■■□□□ 1.9
LIMS2-207ENST00000409808 MRS2Q9HD23 443 aa26.93■■□□□ 1.9
LIMS2-207ENST00000409808 ZBED9Q6R2W3 1325 aa26.92■■□□□ 1.9
LIMS2-207ENST00000409808 NUTM2DQ5VT03 806 aaPredicted RBP26.92■■□□□ 1.9
LIMS2-207ENST00000409808 PPLO60437 1756 aa26.92■■□□□ 1.9
LIMS2-207ENST00000409808 CCDC184Q52MB2 194 aa26.9■■□□□ 1.9
LIMS2-207ENST00000409808 ERVK-7P63135 1459 aa26.9■■□□□ 1.9
LIMS2-207ENST00000409808 SLC52A1Q9NWF4 448 aa26.89■■□□□ 1.9
LIMS2-207ENST00000409808 MYO5BQ9ULV0 1848 aa26.89■■□□□ 1.9
LIMS2-207ENST00000409808 NRXN1Q9ULB1 1477 aa26.86■■□□□ 1.89
LIMS2-207ENST00000409808 IQGAP1P46940 1657 aa26.86■■□□□ 1.89
LIMS2-207ENST00000409808 TESK2Q96S53 571 aa26.85■■□□□ 1.89
LIMS2-207ENST00000409808 ESF1Q9H501 851 aaKnown RBP26.85■■□□□ 1.89
LIMS2-207ENST00000409808 KIAA1210Q9ULL0 1709 aa26.85■■□□□ 1.89
LIMS2-207ENST00000409808 PPP4R2Q9NY27 417 aa26.85■■□□□ 1.89
LIMS2-207ENST00000409808 RPGRIP1LQ68CZ1 1315 aa26.84■■□□□ 1.89
LIMS2-207ENST00000409808 FAM9BQ8IZU0 186 aa26.84■■□□□ 1.89
LIMS2-207ENST00000409808 SENP3Q9H4L4 574 aaPredicted RBP26.83■■□□□ 1.89
LIMS2-207ENST00000409808 TMEM131LA2VDJ0 1609 aa26.82■■□□□ 1.88
LIMS2-207ENST00000409808 NEXMIFQ5QGS0 1516 aa26.82■■□□□ 1.88
LIMS2-207ENST00000409808 ZMYM3Q14202 1370 aa26.81■■□□□ 1.88
LIMS2-207ENST00000409808 SCAF11Q99590 1463 aaKnown RBP26.81■■□□□ 1.88
LIMS2-207ENST00000409808 DISP3Q9P2K9 1392 aa26.81■■□□□ 1.88
LIMS2-207ENST00000409808 PIK3C2GO75747 1445 aa26.8■■□□□ 1.88
LIMS2-207ENST00000409808 SPATA31D1Q6ZQQ2 1576 aa26.78■■□□□ 1.88
LIMS2-207ENST00000409808 CNGB1Q14028 1251 aaPredicted RBP26.76■■□□□ 1.87
LIMS2-207ENST00000409808 C14orf93Q9H972 538 aaKnown RBP26.76■■□□□ 1.87
LIMS2-207ENST00000409808 STAG3Q9UJ98 1225 aa26.76■■□□□ 1.87
LIMS2-207ENST00000409808 VGFO15240 615 aaPredicted RBP26.75■■□□□ 1.87
LIMS2-207ENST00000409808 TMEM132EQ6IEE7 984 aa26.75■■□□□ 1.87
LIMS2-207ENST00000409808 IRX6P78412 446 aaPredicted RBP26.73■■□□□ 1.87
LIMS2-207ENST00000409808 TMF1P82094 1093 aa26.72■■□□□ 1.87
LIMS2-207ENST00000409808 FANCIQ9NVI1 1328 aa26.72■■□□□ 1.87
LIMS2-207ENST00000409808 SMG6Q86US8 1419 aaKnown RBP26.69■■□□□ 1.86
LIMS2-207ENST00000409808 SETBP1Q9Y6X0 1596 aa26.68■■□□□ 1.86
LIMS2-207ENST00000409808 TRAK1Q9UPV9 953 aa26.68■■□□□ 1.86
LIMS2-207ENST00000409808 CEBPAP49715 358 aaPredicted RBP26.68■■□□□ 1.86
LIMS2-207ENST00000409808 EIF3AQ14152 1382 aaKnown RBP26.68■■□□□ 1.86
LIMS2-207ENST00000409808 ADGRB1O14514 1584 aa26.68■■□□□ 1.86
LIMS2-207ENST00000409808 A2ML1A8K2U0 1454 aa26.67■■□□□ 1.86
LIMS2-207ENST00000409808 PLPPR3Q6T4P5 718 aa26.66■■□□□ 1.86
LIMS2-207ENST00000409808 ZFYVE9O95405 1425 aa26.65■■□□□ 1.86
LIMS2-207ENST00000409808 KTN1Q86UP2 1357 aaKnown RBP26.65■■□□□ 1.86
LIMS2-207ENST00000409808 TNRQ92752 1358 aa26.63■■□□□ 1.85
LIMS2-207ENST00000409808 FER1L4A9Z1Z3 1794 aa26.59■■□□□ 1.85
LIMS2-207ENST00000409808 RIMS2Q9UQ26 1411 aa26.58■■□□□ 1.85
LIMS2-207ENST00000409808 NUDCQ9Y266 331 aa26.58■■□□□ 1.85
LIMS2-207ENST00000409808 CENPJQ9HC77 1338 aaPredicted RBP26.57■■□□□ 1.84
LIMS2-207ENST00000409808 MYO3AQ8NEV4 1616 aa26.57■■□□□ 1.84
LIMS2-207ENST00000409808 PANK3Q9H999 370 aa26.57■■□□□ 1.84
LIMS2-207ENST00000409808 C3P01024 1663 aa26.57■■□□□ 1.84
LIMS2-207ENST00000409808 ASXL1Q8IXJ9 1541 aa26.56■■□□□ 1.84
LIMS2-207ENST00000409808 RNF123Q5XPI4 1314 aa26.56■■□□□ 1.84
LIMS2-207ENST00000409808 STK26Q9P289 416 aa26.56■■□□□ 1.84
LIMS2-207ENST00000409808 PNISRQ8TF01 805 aaKnown RBP26.55■■□□□ 1.84
LIMS2-207ENST00000409808 PER1O15534 1290 aaPredicted RBP26.54■■□□□ 1.84
LIMS2-207ENST00000409808 RALBP1Q15311 655 aa26.54■■□□□ 1.84
LIMS2-207ENST00000409808 QRICH2Q9H0J4 1663 aa26.53■■□□□ 1.84
LIMS2-207ENST00000409808 TMC1Q8TDI8 760 aa26.53■■□□□ 1.84
LIMS2-207ENST00000409808 ALKQ9UM73 1620 aa26.52■■□□□ 1.84
LIMS2-207ENST00000409808 CDCA8Q53HL2 280 aa26.51■■□□□ 1.84
LIMS2-207ENST00000409808 BRD4O60885 1362 aaPredicted RBP26.51■■□□□ 1.83
LIMS2-207ENST00000409808 ARHGEF28Q8N1W1 1705 aaKnown RBP26.51■■□□□ 1.83
LIMS2-207ENST00000409808 UBR1Q8IWV7 1749 aa26.5■■□□□ 1.83
LIMS2-207ENST00000409808 KDM5AP29375 1690 aaKnown RBP26.5■■□□□ 1.83
LIMS2-207ENST00000409808 SAFB2Q14151 953 aaKnown RBP eCLIP26.49■■□□□ 1.83
LIMS2-207ENST00000409808 B4GALNT3Q6L9W6 998 aa26.49■■□□□ 1.83
LIMS2-207ENST00000409808 MSH5O43196 834 aa26.48■■□□□ 1.83
LIMS2-207ENST00000409808 LRPPRCP42704 1394 aaKnown RBP26.48■■□□□ 1.83
LIMS2-207ENST00000409808 MYOM1P52179 1685 aa26.48■■□□□ 1.83
LIMS2-207ENST00000409808 MYBBP1AQ9BQG0 1328 aaKnown RBP26.47■■□□□ 1.83
LIMS2-207ENST00000409808 SBNO2Q9Y2G9 1366 aa26.47■■□□□ 1.83
LIMS2-207ENST00000409808 PTPRMP28827 1452 aa26.45■■□□□ 1.82
LIMS2-207ENST00000409808 YTHDC2Q9H6S0 1430 aaKnown RBP26.44■■□□□ 1.82
LIMS2-207ENST00000409808 CC2D1BQ5T0F9 858 aaKnown RBP26.44■■□□□ 1.82
LIMS2-207ENST00000409808 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.43■■□□□ 1.82
LIMS2-207ENST00000409808 TMEM2Q9UHN6 1383 aa26.43■■□□□ 1.82
LIMS2-207ENST00000409808 SLC24A1O60721 1099 aa26.43■■□□□ 1.82
LIMS2-207ENST00000409808 NRXN3Q9Y4C0 1643 aa26.42■■□□□ 1.82
LIMS2-207ENST00000409808 NLRP1Q9C000 1473 aa26.42■■□□□ 1.82
LIMS2-207ENST00000409808 SETD1AO15047 1707 aaKnown RBP26.41■■□□□ 1.82
LIMS2-207ENST00000409808 RIMS1Q86UR5 1692 aaKnown RBP26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms