RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 CCDC144AA2RUR9 1427 aa33.02■■■□□ 2.88
PTCD3-203ENST00000409783 ANKRD30BQ9BXX2 1392 aa33■■■□□ 2.87
PTCD3-203ENST00000409783 NEXMIFQ5QGS0 1516 aa32.97■■■□□ 2.87
PTCD3-203ENST00000409783 LTBP4Q8N2S1 1624 aa32.96■■■□□ 2.87
PTCD3-203ENST00000409783 SPATA31E1Q6ZUB1 1445 aa32.95■■■□□ 2.87
PTCD3-203ENST00000409783 HDGFP51858 240 aaKnown RBP32.95■■■□□ 2.87
PTCD3-203ENST00000409783 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.95■■■□□ 2.87
PTCD3-203ENST00000409783 PLEKHG1Q9ULL1 1385 aa32.95■■■□□ 2.86
PTCD3-203ENST00000409783 ZNF326Q5BKZ1 582 aaKnown RBP32.93■■■□□ 2.86
PTCD3-203ENST00000409783 ZNF335Q9H4Z2 1342 aaPredicted RBP32.93■■■□□ 2.86
PTCD3-203ENST00000409783 NUTM2DQ5VT03 806 aaPredicted RBP32.92■■■□□ 2.86
PTCD3-203ENST00000409783 PPLO60437 1756 aa32.88■■■□□ 2.85
PTCD3-203ENST00000409783 PPP1R15AO75807 674 aaPredicted RBP32.88■■■□□ 2.85
PTCD3-203ENST00000409783 RPGRIP1LQ68CZ1 1315 aa32.86■■■□□ 2.85
PTCD3-203ENST00000409783 STRCP1A6NGW2 1772 aa32.86■■■□□ 2.85
PTCD3-203ENST00000409783 IFT172Q9UG01 1749 aa32.85■■■□□ 2.85
PTCD3-203ENST00000409783 NRXN3Q9Y4C0 1643 aa32.84■■■□□ 2.85
PTCD3-203ENST00000409783 SLC26A8Q96RN1 970 aa32.84■■■□□ 2.85
PTCD3-203ENST00000409783 ADAMTS13Q76LX8 1427 aa32.84■■■□□ 2.85
PTCD3-203ENST00000409783 SENP3Q9H4L4 574 aaPredicted RBP32.82■■■□□ 2.84
PTCD3-203ENST00000409783 DHX57Q6P158 1386 aaKnown RBP32.82■■■□□ 2.84
PTCD3-203ENST00000409783 SETBP1Q9Y6X0 1596 aa32.81■■■□□ 2.84
PTCD3-203ENST00000409783 RGL3Q3MIN7 710 aa32.8■■■□□ 2.84
PTCD3-203ENST00000409783 CERKQ8TCT0 537 aa32.79■■■□□ 2.84
PTCD3-203ENST00000409783 BCANQ96GW7 911 aa32.78■■■□□ 2.84
PTCD3-203ENST00000409783 DIP2AQ14689 1571 aa32.78■■■□□ 2.84
PTCD3-203ENST00000409783 PCGF6Q9BYE7 350 aa32.77■■■□□ 2.84
PTCD3-203ENST00000409783 TBX22Q9Y458 520 aa32.77■■■□□ 2.84
PTCD3-203ENST00000409783 CPS1P31327 1500 aa32.76■■■□□ 2.83
PTCD3-203ENST00000409783 VGFO15240 615 aaPredicted RBP32.75■■■□□ 2.83
PTCD3-203ENST00000409783 CHD2O14647 1828 aaKnown RBP32.73■■■□□ 2.83
PTCD3-203ENST00000409783 NWD1Q149M9 1564 aa32.72■■■□□ 2.83
PTCD3-203ENST00000409783 SETD1AO15047 1707 aaKnown RBP32.69■■■□□ 2.82
PTCD3-203ENST00000409783 ADGRF5Q8IZF2 1346 aa32.69■■■□□ 2.82
PTCD3-203ENST00000409783 KCNA6P17658 529 aa32.68■■■□□ 2.82
PTCD3-203ENST00000409783 IQSEC2Q5JU85 1478 aa32.67■■■□□ 2.82
PTCD3-203ENST00000409783 PIK3R4Q99570 1358 aa32.66■■■□□ 2.82
PTCD3-203ENST00000409783 LRRC7Q96NW7 1537 aa32.66■■■□□ 2.82
PTCD3-203ENST00000409783 MYOM2P54296 1465 aa32.65■■■□□ 2.82
PTCD3-203ENST00000409783 NRXN1Q9ULB1 1477 aa32.64■■■□□ 2.82
PTCD3-203ENST00000409783 ALKQ9UM73 1620 aa32.64■■■□□ 2.82
PTCD3-203ENST00000409783 PTPRUQ92729 1446 aa32.63■■■□□ 2.81
PTCD3-203ENST00000409783 METP08581 1390 aa32.62■■■□□ 2.81
PTCD3-203ENST00000409783 XIRP1Q702N8 1843 aaKnown RBP32.62■■■□□ 2.81
PTCD3-203ENST00000409783 PIK3C2GO75747 1445 aa32.61■■■□□ 2.81
PTCD3-203ENST00000409783 NKTRP30414 1462 aaKnown RBP32.61■■■□□ 2.81
PTCD3-203ENST00000409783 SIN3AQ96ST3 1273 aa32.59■■■□□ 2.81
PTCD3-203ENST00000409783 XRN1Q8IZH2 1706 aaKnown RBP32.58■■■□□ 2.81
PTCD3-203ENST00000409783 DCAF11Q8TEB1 546 aa32.54■■■□□ 2.8
PTCD3-203ENST00000409783 AMOTL2Q9Y2J4 779 aa32.53■■■□□ 2.8
PTCD3-203ENST00000409783 STAC3Q96MF2 364 aa32.51■■■□□ 2.79
PTCD3-203ENST00000409783 ASXL1Q8IXJ9 1541 aa32.51■■■□□ 2.79
PTCD3-203ENST00000409783 TMEM94Q12767 1356 aa32.5■■■□□ 2.79
PTCD3-203ENST00000409783 PROSER2Q86WR7 435 aaPredicted RBP32.5■■■□□ 2.79
PTCD3-203ENST00000409783 FBXO41Q8TF61 875 aa32.49■■■□□ 2.79
PTCD3-203ENST00000409783 KDM2AQ9Y2K7 1162 aa32.49■■■□□ 2.79
PTCD3-203ENST00000409783 C14orf93Q9H972 538 aaKnown RBP32.48■■■□□ 2.79
PTCD3-203ENST00000409783 LAMC1P11047 1609 aa32.48■■■□□ 2.79
PTCD3-203ENST00000409783 PRAG1Q86YV5 1406 aa32.45■■■□□ 2.79
PTCD3-203ENST00000409783 NEUROD1Q13562 356 aa32.45■■■□□ 2.79
PTCD3-203ENST00000409783 RBM33Q96EV2 1170 aaKnown RBP32.45■■■□□ 2.79
PTCD3-203ENST00000409783 CFAP70Q5T0N1 1121 aa32.44■■■□□ 2.78
PTCD3-203ENST00000409783 L3MBTL2Q969R5 705 aa32.42■■■□□ 2.78
PTCD3-203ENST00000409783 NCOA3Q9Y6Q9 1424 aa32.41■■■□□ 2.78
PTCD3-203ENST00000409783 TMEM132EQ6IEE7 984 aa32.39■■■□□ 2.78
PTCD3-203ENST00000409783 PTCH1Q13635 1447 aa32.39■■■□□ 2.78
PTCD3-203ENST00000409783 ILDR1Q86SU0 546 aaPredicted RBP32.38■■■□□ 2.77
PTCD3-203ENST00000409783 ADGRB1O14514 1584 aa32.37■■■□□ 2.77
PTCD3-203ENST00000409783 LRPPRCP42704 1394 aaKnown RBP32.37■■■□□ 2.77
PTCD3-203ENST00000409783 ROBO2Q9HCK4 1378 aa32.37■■■□□ 2.77
PTCD3-203ENST00000409783 KNDC1Q76NI1 1749 aa32.37■■■□□ 2.77
PTCD3-203ENST00000409783 TECPR2O15040 1411 aa32.36■■■□□ 2.77
PTCD3-203ENST00000409783 UBAP1LF5GYI3 381 aa32.36■■■□□ 2.77
PTCD3-203ENST00000409783 YTHDC2Q9H6S0 1430 aaKnown RBP32.34■■■□□ 2.77
PTCD3-203ENST00000409783 ABCC11Q96J66 1382 aa32.33■■■□□ 2.77
PTCD3-203ENST00000409783 KIAA1210Q9ULL0 1709 aa32.32■■■□□ 2.76
PTCD3-203ENST00000409783 TOM1O60784 492 aa32.3■■■□□ 2.76
PTCD3-203ENST00000409783 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.3■■■□□ 2.76
PTCD3-203ENST00000409783 STK26Q9P289 416 aa32.29■■■□□ 2.76
PTCD3-203ENST00000409783 MSH6P52701 1360 aa32.29■■■□□ 2.76
PTCD3-203ENST00000409783 CLSPNQ9HAW4 1339 aa32.28■■■□□ 2.76
PTCD3-203ENST00000409783 NALCNQ8IZF0 1738 aa32.28■■■□□ 2.76
PTCD3-203ENST00000409783 C19orf44Q9H6X5 657 aa32.25■■■□□ 2.75
PTCD3-203ENST00000409783 ADGRL3Q9HAR2 1447 aa32.25■■■□□ 2.75
PTCD3-203ENST00000409783 TONSLQ96HA7 1378 aa32.23■■■□□ 2.75
PTCD3-203ENST00000409783 DLC1Q96QB1 1528 aa32.22■■■□□ 2.75
PTCD3-203ENST00000409783 C14orf37Q86TY3 774 aa32.22■■■□□ 2.75
PTCD3-203ENST00000409783 SIRT1Q96EB6 747 aa32.22■■■□□ 2.75
PTCD3-203ENST00000409783 FAM135BQ49AJ0 1406 aa32.22■■■□□ 2.75
PTCD3-203ENST00000409783 PLEKHH1Q9ULM0 1364 aa32.2■■■□□ 2.75
PTCD3-203ENST00000409783 DCCP43146 1447 aa32.2■■■□□ 2.75
PTCD3-203ENST00000409783 TRPM1Q7Z4N2 1603 aa32.2■■■□□ 2.75
PTCD3-203ENST00000409783 WAPLQ7Z5K2 1190 aa32.2■■■□□ 2.75
PTCD3-203ENST00000409783 NBPF1Q3BBV0 1214 aa32.19■■■□□ 2.74
PTCD3-203ENST00000409783 PIP4K2BP78356 416 aa32.18■■■□□ 2.74
PTCD3-203ENST00000409783 NBPF8Q3BBV2 869 aa32.17■■■□□ 2.74
PTCD3-203ENST00000409783 CADPS2Q86UW7 1296 aa32.15■■■□□ 2.74
PTCD3-203ENST00000409783 CCER1Q8TC90 406 aaPredicted RBP32.15■■■□□ 2.74
PTCD3-203ENST00000409783 ARHGEF28Q8N1W1 1705 aaKnown RBP32.14■■■□□ 2.74
PTCD3-203ENST00000409783 SLAIN2Q9P270 581 aa32.13■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms