RNA–Protein interactions for RNA: ENST00000409681.1

POLR1A-203, Transcript of RNA polymerase I subunit A, humanhuman

TSL 5 BASIC

Gene POLR1A, Length 6,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-203ENST00000409681 NAIPQ13075 1403 aa12.95□□□□□ -0.34
POLR1A-203ENST00000409681 TEFQ10587 303 aa12.94□□□□□ -0.34
POLR1A-203ENST00000409681 ABTB2Q8N961 1025 aa12.94□□□□□ -0.34
POLR1A-203ENST00000409681 DIAPH1O60610 1272 aaKnown RBP12.94□□□□□ -0.34
POLR1A-203ENST00000409681 RTEL1-TNFRSF6BF6WH68 1400 aa12.94□□□□□ -0.34
POLR1A-203ENST00000409681 DISP1Q96F81 1524 aa12.94□□□□□ -0.34
POLR1A-203ENST00000409681 KDM5BQ9UGL1 1544 aa12.93□□□□□ -0.34
POLR1A-203ENST00000409681 SENP3-EIF4A1A0A087X0R7 540 aa12.93□□□□□ -0.34
POLR1A-203ENST00000409681 TTC5Q8N0Z6 440 aa12.93□□□□□ -0.34
POLR1A-203ENST00000409681 FBXO31Q5XUX0 539 aaPredicted RBP12.93□□□□□ -0.34
POLR1A-203ENST00000409681 DUOX2Q9NRD8 1548 aa12.92□□□□□ -0.34
POLR1A-203ENST00000409681 CNTLNQ9NXG0 1405 aa12.92□□□□□ -0.34
POLR1A-203ENST00000409681 PIP4K2BP78356 416 aa12.92□□□□□ -0.34
POLR1A-203ENST00000409681 NLRP2Q9NX02 1062 aa12.92□□□□□ -0.34
POLR1A-203ENST00000409681 FAM135AQ9P2D6 1515 aa12.92□□□□□ -0.34
POLR1A-203ENST00000409681 CDK19Q9BWU1 502 aa12.91□□□□□ -0.34
POLR1A-203ENST00000409681 IDI1Q13907 227 aa12.91□□□□□ -0.34
POLR1A-203ENST00000409681 ATAD2Q6PL18 1390 aa12.91□□□□□ -0.34
POLR1A-203ENST00000409681 NGEFQ8N5V2 710 aa12.9□□□□□ -0.34
POLR1A-203ENST00000409681 GTF2E1P29083 439 aaPredicted RBP12.9□□□□□ -0.34
POLR1A-203ENST00000409681 PMFBP1Q8TBY8 1022 aa12.89□□□□□ -0.35
POLR1A-203ENST00000409681 SMG6Q86US8 1419 aaKnown RBP12.89□□□□□ -0.35
POLR1A-203ENST00000409681 SYCP2Q9BX26 1530 aa12.89□□□□□ -0.35
POLR1A-203ENST00000409681 NEO1Q92859 1461 aa12.89□□□□□ -0.35
POLR1A-203ENST00000409681 HMGB2P26583 209 aaKnown RBP12.88□□□□□ -0.35
POLR1A-203ENST00000409681 UHRF1BP1LA0JNW5 1464 aa12.88□□□□□ -0.35
POLR1A-203ENST00000409681 PDE3BQ13370 1112 aa12.87□□□□□ -0.35
POLR1A-203ENST00000409681 LRPPRCP42704 1394 aaKnown RBP12.87□□□□□ -0.35
POLR1A-203ENST00000409681 NUTM2GQ5VZR2 741 aa12.87□□□□□ -0.35
POLR1A-203ENST00000409681 AMOTL2Q9Y2J4 779 aa12.86□□□□□ -0.35
POLR1A-203ENST00000409681 SF3B2Q13435 895 aaKnown RBP12.86□□□□□ -0.35
POLR1A-203ENST00000409681 TRAPPC8Q9Y2L5 1435 aa12.86□□□□□ -0.35
POLR1A-203ENST00000409681 ATP10AO60312 1499 aa12.86□□□□□ -0.35
POLR1A-203ENST00000409681 SYTL4Q96C24 671 aaPredicted RBP12.86□□□□□ -0.35
POLR1A-203ENST00000409681 DNAJC5Q9H3Z4 198 aa12.86□□□□□ -0.35
POLR1A-203ENST00000409681 NUTM2BA6NNL0 878 aaPredicted RBP12.86□□□□□ -0.35
POLR1A-203ENST00000409681 NUTM2EB1AL46 878 aaPredicted RBP12.86□□□□□ -0.35
POLR1A-203ENST00000409681 NUTM2AQ8IVF1 878 aaPredicted RBP12.86□□□□□ -0.35
POLR1A-203ENST00000409681 GGNBP2Q9H3C7 697 aa12.86□□□□□ -0.35
POLR1A-203ENST00000409681 MSH5O43196 834 aa12.85□□□□□ -0.35
POLR1A-203ENST00000409681 CCDC61Q9Y6R9 512 aa12.85□□□□□ -0.35
POLR1A-203ENST00000409681 TAF7LQ5H9L4 462 aa12.85□□□□□ -0.35
POLR1A-203ENST00000409681 CADPS2Q86UW7 1296 aa12.85□□□□□ -0.35
POLR1A-203ENST00000409681 NBPF1Q3BBV0 1214 aa12.85□□□□□ -0.35
POLR1A-203ENST00000409681 IRX6P78412 446 aaPredicted RBP12.84□□□□□ -0.35
POLR1A-203ENST00000409681 TOM1O60784 492 aa12.84□□□□□ -0.35
POLR1A-203ENST00000409681 CCDC146Q8IYE0 955 aa12.84□□□□□ -0.35
POLR1A-203ENST00000409681 CABP1Q9NZU7 370 aa12.84□□□□□ -0.35
POLR1A-203ENST00000409681 PRDM11Q9NQV5 511 aa12.84□□□□□ -0.35
POLR1A-203ENST00000409681 CFAP44Q96MT7 982 aa12.83□□□□□ -0.36
POLR1A-203ENST00000409681 CCDC7Q96M83 1385 aa12.83□□□□□ -0.36
POLR1A-203ENST00000409681 KCNH5Q8NCM2 988 aa12.83□□□□□ -0.36
POLR1A-203ENST00000409681 SMC4Q9NTJ3 1288 aa12.82□□□□□ -0.36
POLR1A-203ENST00000409681 G3V3G9 751 aa12.82□□□□□ -0.36
POLR1A-203ENST00000409681 PLEKHO1Q53GL0 409 aaPredicted RBP12.82□□□□□ -0.36
POLR1A-203ENST00000409681 DCAF8Q5TAQ9 597 aa12.82□□□□□ -0.36
POLR1A-203ENST00000409681 SUPT16HQ9Y5B9 1047 aaKnown RBP12.82□□□□□ -0.36
POLR1A-203ENST00000409681 NUDT16Q96DE0 195 aaKnown RBP12.82□□□□□ -0.36
POLR1A-203ENST00000409681 TATP17735 454 aaPredicted RBP12.82□□□□□ -0.36
POLR1A-203ENST00000409681 WASHC2AQ641Q2 1341 aa12.82□□□□□ -0.36
POLR1A-203ENST00000409681 STRN4Q9NRL3 753 aa12.82□□□□□ -0.36
POLR1A-203ENST00000409681 KIF7Q2M1P5 1343 aa12.81□□□□□ -0.36
POLR1A-203ENST00000409681 MSH6P52701 1360 aa12.81□□□□□ -0.36
POLR1A-203ENST00000409681 SHANK2Q9UPX8 1470 aa12.81□□□□□ -0.36
POLR1A-203ENST00000409681 CFAP74Q9C0B2 1584 aa12.81□□□□□ -0.36
POLR1A-203ENST00000409681 HMMRO75330 724 aa12.81□□□□□ -0.36
POLR1A-203ENST00000409681 PRKRIP1Q9H875 184 aaPredicted RBP12.81□□□□□ -0.36
POLR1A-203ENST00000409681 GAS2L2Q8NHY3 880 aa12.8□□□□□ -0.36
POLR1A-203ENST00000409681 ZMYM3Q14202 1370 aa12.8□□□□□ -0.36
POLR1A-203ENST00000409681 TOM1L2Q6ZVM7 507 aa12.8□□□□□ -0.36
POLR1A-203ENST00000409681 NEXNQ0ZGT2 675 aa12.8□□□□□ -0.36
POLR1A-203ENST00000409681 PHF8Q9UPP1 1060 aa12.79□□□□□ -0.36
POLR1A-203ENST00000409681 CHMP3Q9Y3E7 222 aa12.79□□□□□ -0.36
POLR1A-203ENST00000409681 UHRF1BP1Q6BDS2 1440 aa12.79□□□□□ -0.36
POLR1A-203ENST00000409681 CHD1O14646 1710 aa12.78□□□□□ -0.36
POLR1A-203ENST00000409681 DCAF8L1A6NGE4 600 aa12.78□□□□□ -0.36
POLR1A-203ENST00000409681 DDX58O95786 925 aaKnown RBP12.78□□□□□ -0.36
POLR1A-203ENST00000409681 ITPRIPQ8IWB1 547 aa12.78□□□□□ -0.36
POLR1A-203ENST00000409681 GORABQ5T7V8 394 aa12.78□□□□□ -0.36
POLR1A-203ENST00000409681 RUNDC1Q96C34 613 aa12.78□□□□□ -0.36
POLR1A-203ENST00000409681 SAMD9Q5K651 1589 aa12.78□□□□□ -0.36
POLR1A-203ENST00000409681 RCAN3Q9UKA8 241 aa12.78□□□□□ -0.36
POLR1A-203ENST00000409681 TCOF1Q13428 1488 aaKnown RBP12.78□□□□□ -0.36
POLR1A-203ENST00000409681 E9PSI1 815 aa12.77□□□□□ -0.36
POLR1A-203ENST00000409681 KCNJ4P48050 445 aa12.77□□□□□ -0.36
POLR1A-203ENST00000409681 USP35Q9P2H5 1018 aa12.77□□□□□ -0.36
POLR1A-203ENST00000409681 SLC12A5Q9H2X9 1139 aa12.77□□□□□ -0.36
POLR1A-203ENST00000409681 NOS1P29475 1434 aa12.77□□□□□ -0.36
POLR1A-203ENST00000409681 RIPK4P57078 832 aa12.77□□□□□ -0.37
POLR1A-203ENST00000409681 C14orf93Q9H972 538 aaKnown RBP12.77□□□□□ -0.37
POLR1A-203ENST00000409681 SPG7Q9UQ90 795 aa12.77□□□□□ -0.37
POLR1A-203ENST00000409681 RRP7AQ9Y3A4 280 aaKnown RBP12.76□□□□□ -0.37
POLR1A-203ENST00000409681 SLC4A10Q6U841 1118 aa12.76□□□□□ -0.37
POLR1A-203ENST00000409681 UBAP1LF5GYI3 381 aa12.76□□□□□ -0.37
POLR1A-203ENST00000409681 GPATCH3Q96I76 525 aa12.76□□□□□ -0.37
POLR1A-203ENST00000409681 RIMS2Q9UQ26 1411 aa12.76□□□□□ -0.37
POLR1A-203ENST00000409681 GNAI1P63096 354 aa12.76□□□□□ -0.37
POLR1A-203ENST00000409681 WAPLQ7Z5K2 1190 aa12.76□□□□□ -0.37
POLR1A-203ENST00000409681 PPP4R2Q9NY27 417 aa12.76□□□□□ -0.37
POLR1A-203ENST00000409681 WASLO00401 505 aaPredicted RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms