RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 CC2D1BQ5T0F9 858 aaKnown RBP20.6■□□□□ 0.89
SCAMP4-202ENST00000409472 KTN1Q86UP2 1357 aaKnown RBP20.6■□□□□ 0.89
SCAMP4-202ENST00000409472 BRD4O60885 1362 aaPredicted RBP20.6■□□□□ 0.89
SCAMP4-202ENST00000409472 DIP2CQ9Y2E4 1556 aa20.6■□□□□ 0.89
SCAMP4-202ENST00000409472 NEO1Q92859 1461 aa20.59■□□□□ 0.89
SCAMP4-202ENST00000409472 LRPPRCP42704 1394 aaKnown RBP20.59■□□□□ 0.89
SCAMP4-202ENST00000409472 CFAP70Q5T0N1 1121 aa20.59■□□□□ 0.89
SCAMP4-202ENST00000409472 RICTORQ6R327 1708 aa20.59■□□□□ 0.89
SCAMP4-202ENST00000409472 KIAA1210Q9ULL0 1709 aa20.59■□□□□ 0.89
SCAMP4-202ENST00000409472 MYOM2P54296 1465 aa20.59■□□□□ 0.89
SCAMP4-202ENST00000409472 ABCC3O15438 1527 aa20.58■□□□□ 0.89
SCAMP4-202ENST00000409472 ADGRB3O60242 1522 aa20.58■□□□□ 0.89
SCAMP4-202ENST00000409472 CYB5RLQ6IPT4 315 aa20.58■□□□□ 0.89
SCAMP4-202ENST00000409472 ERICH6Q7L0X2 663 aa20.58■□□□□ 0.89
SCAMP4-202ENST00000409472 SIGLEC1Q9BZZ2 1709 aa20.58■□□□□ 0.89
SCAMP4-202ENST00000409472 MYOM1P52179 1685 aa20.57■□□□□ 0.88
SCAMP4-202ENST00000409472 NOS1P29475 1434 aa20.55■□□□□ 0.88
SCAMP4-202ENST00000409472 YEATS2Q9ULM3 1422 aa20.55■□□□□ 0.88
SCAMP4-202ENST00000409472 CAMSAP1Q5T5Y3 1602 aa20.55■□□□□ 0.88
SCAMP4-202ENST00000409472 CHGAP10645 457 aaKnown RBP20.54■□□□□ 0.88
SCAMP4-202ENST00000409472 RIMBP3CA6NJZ7 1639 aa20.53■□□□□ 0.88
SCAMP4-202ENST00000409472 RIMBP3BA6NNM3 1639 aa20.53■□□□□ 0.88
SCAMP4-202ENST00000409472 NLRP13Q86W25 1043 aa20.53■□□□□ 0.88
SCAMP4-202ENST00000409472 RIMBP3Q9UFD9 1639 aa20.53■□□□□ 0.88
SCAMP4-202ENST00000409472 NRXN1Q9ULB1 1477 aa20.52■□□□□ 0.88
SCAMP4-202ENST00000409472 SMG6Q86US8 1419 aaKnown RBP20.52■□□□□ 0.88
SCAMP4-202ENST00000409472 WASHC2CQ9Y4E1 1318 aa20.52■□□□□ 0.88
SCAMP4-202ENST00000409472 PPLO60437 1756 aa20.51■□□□□ 0.87
SCAMP4-202ENST00000409472 SYNMO15061 1565 aa20.51■□□□□ 0.87
SCAMP4-202ENST00000409472 STAC3Q96MF2 364 aa20.5■□□□□ 0.87
SCAMP4-202ENST00000409472 ERVK-7P63135 1459 aa20.48■□□□□ 0.87
SCAMP4-202ENST00000409472 NUDCQ9Y266 331 aa20.48■□□□□ 0.87
SCAMP4-202ENST00000409472 KDM5AP29375 1690 aaKnown RBP20.47■□□□□ 0.87
SCAMP4-202ENST00000409472 EIF3AQ14152 1382 aaKnown RBP20.47■□□□□ 0.87
SCAMP4-202ENST00000409472 SALL2Q9Y467 1007 aaPredicted RBP20.46■□□□□ 0.87
SCAMP4-202ENST00000409472 TSPOAP1O95153 1857 aa20.45■□□□□ 0.86
SCAMP4-202ENST00000409472 PIK3C2GO75747 1445 aa20.45■□□□□ 0.86
SCAMP4-202ENST00000409472 PIK3C2BO00750 1634 aa20.45■□□□□ 0.86
SCAMP4-202ENST00000409472 GLI2P10070 1586 aa20.44■□□□□ 0.86
SCAMP4-202ENST00000409472 NUTM2DQ5VT03 806 aaPredicted RBP20.44■□□□□ 0.86
SCAMP4-202ENST00000409472 DIP2BQ9P265 1576 aa20.44■□□□□ 0.86
SCAMP4-202ENST00000409472 AMER1Q5JTC6 1135 aaPredicted RBP20.43■□□□□ 0.86
SCAMP4-202ENST00000409472 MYO3AQ8NEV4 1616 aa20.43■□□□□ 0.86
SCAMP4-202ENST00000409472 ADGRB1O14514 1584 aa20.42■□□□□ 0.86
SCAMP4-202ENST00000409472 FAM69CQ0P6D2 419 aa20.41■□□□□ 0.86
SCAMP4-202ENST00000409472 KNSTRNQ9Y448 316 aa20.41■□□□□ 0.86
SCAMP4-202ENST00000409472 SETBP1Q9Y6X0 1596 aa20.4■□□□□ 0.86
SCAMP4-202ENST00000409472 TMEM132EQ6IEE7 984 aa20.4■□□□□ 0.86
SCAMP4-202ENST00000409472 ASXL1Q8IXJ9 1541 aa20.4■□□□□ 0.86
SCAMP4-202ENST00000409472 SENP3Q9H4L4 574 aaPredicted RBP20.39■□□□□ 0.86
SCAMP4-202ENST00000409472 ZC3H13Q5T200 1668 aaKnown RBP20.39■□□□□ 0.85
SCAMP4-202ENST00000409472 NEXMIFQ5QGS0 1516 aa20.39■□□□□ 0.85
SCAMP4-202ENST00000409472 MYO5BQ9ULV0 1848 aa20.38■□□□□ 0.85
SCAMP4-202ENST00000409472 TRAK1Q9UPV9 953 aa20.38■□□□□ 0.85
SCAMP4-202ENST00000409472 QRICH2Q9H0J4 1663 aa20.38■□□□□ 0.85
SCAMP4-202ENST00000409472 CDCA8Q53HL2 280 aa20.38■□□□□ 0.85
SCAMP4-202ENST00000409472 BLMP54132 1417 aaPredicted RBP20.38■□□□□ 0.85
SCAMP4-202ENST00000409472 PPP2R1AP30153 589 aa20.37■□□□□ 0.85
SCAMP4-202ENST00000409472 B4GALNT3Q6L9W6 998 aa20.37■□□□□ 0.85
SCAMP4-202ENST00000409472 C14orf93Q9H972 538 aaKnown RBP20.36■□□□□ 0.85
SCAMP4-202ENST00000409472 PPP4R2Q9NY27 417 aa20.36■□□□□ 0.85
SCAMP4-202ENST00000409472 ZMYM4Q5VZL5 1548 aa20.35■□□□□ 0.85
SCAMP4-202ENST00000409472 RNF123Q5XPI4 1314 aa20.35■□□□□ 0.85
SCAMP4-202ENST00000409472 PREX1Q8TCU6 1659 aa20.35■□□□□ 0.85
SCAMP4-202ENST00000409472 CENPJQ9HC77 1338 aaPredicted RBP20.34■□□□□ 0.85
SCAMP4-202ENST00000409472 ARHGAP31Q2M1Z3 1444 aa20.34■□□□□ 0.85
SCAMP4-202ENST00000409472 IDI1Q13907 227 aa20.34■□□□□ 0.85
SCAMP4-202ENST00000409472 CARD14Q9BXL6 1004 aa20.34■□□□□ 0.85
SCAMP4-202ENST00000409472 CDCA7LQ96GN5 454 aa20.33■□□□□ 0.85
SCAMP4-202ENST00000409472 ERICH6BQ5W0A0 696 aa20.32■□□□□ 0.84
SCAMP4-202ENST00000409472 SBNO2Q9Y2G9 1366 aa20.32■□□□□ 0.84
SCAMP4-202ENST00000409472 ADAMTS8Q9UP79 889 aa20.31■□□□□ 0.84
SCAMP4-202ENST00000409472 ARHGEF28Q8N1W1 1705 aaKnown RBP20.3■□□□□ 0.84
SCAMP4-202ENST00000409472 FBXO31Q5XUX0 539 aaPredicted RBP20.3■□□□□ 0.84
SCAMP4-202ENST00000409472 RPGRIP1LQ68CZ1 1315 aa20.29■□□□□ 0.84
SCAMP4-202ENST00000409472 TMEM131LA2VDJ0 1609 aa20.28■□□□□ 0.84
SCAMP4-202ENST00000409472 NPC1L1Q9UHC9 1359 aa20.26■□□□□ 0.83
SCAMP4-202ENST00000409472 TULP4Q9NRJ4 1543 aa20.25■□□□□ 0.83
SCAMP4-202ENST00000409472 RBM19Q9Y4C8 960 aaKnown RBP20.25■□□□□ 0.83
SCAMP4-202ENST00000409472 SLC12A5Q9H2X9 1139 aa20.24■□□□□ 0.83
SCAMP4-202ENST00000409472 INSRP06213 1382 aa20.24■□□□□ 0.83
SCAMP4-202ENST00000409472 PLEKHH1Q9ULM0 1364 aa20.23■□□□□ 0.83
SCAMP4-202ENST00000409472 NSD3Q9BZ95 1437 aa20.23■□□□□ 0.83
SCAMP4-202ENST00000409472 CLTCQ00610 1675 aaKnown RBP20.22■□□□□ 0.83
SCAMP4-202ENST00000409472 SAFB2Q14151 953 aaKnown RBP eCLIP20.22■□□□□ 0.83
SCAMP4-202ENST00000409472 VGFO15240 615 aaPredicted RBP20.22■□□□□ 0.83
SCAMP4-202ENST00000409472 KIF13AQ9H1H9 1805 aa20.22■□□□□ 0.83
SCAMP4-202ENST00000409472 RCAN3Q9UKA8 241 aa20.21■□□□□ 0.83
SCAMP4-202ENST00000409472 WDR43Q15061 677 aaKnown RBP eCLIP20.21■□□□□ 0.83
SCAMP4-202ENST00000409472 RRP1P56182 461 aaKnown RBP20.2■□□□□ 0.82
SCAMP4-202ENST00000409472 SLC52A1Q9NWF4 448 aa20.2■□□□□ 0.82
SCAMP4-202ENST00000409472 CCDC146Q8IYE0 955 aa20.19■□□□□ 0.82
SCAMP4-202ENST00000409472 STK26Q9P289 416 aa20.19■□□□□ 0.82
SCAMP4-202ENST00000409472 PDE3BQ13370 1112 aa20.19■□□□□ 0.82
SCAMP4-202ENST00000409472 REREQ9P2R6 1566 aa20.18■□□□□ 0.82
SCAMP4-202ENST00000409472 SLC24A1O60721 1099 aa20.17■□□□□ 0.82
SCAMP4-202ENST00000409472 MLECQ14165 292 aa20.17■□□□□ 0.82
SCAMP4-202ENST00000409472 ZFYVE9O95405 1425 aa20.16■□□□□ 0.82
SCAMP4-202ENST00000409472 AGLP35573 1532 aa20.16■□□□□ 0.82
SCAMP4-202ENST00000409472 TNNT2P45379 298 aaPredicted RBP20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms