RNA–Protein interactions for RNA: ENST00000409252.6

SH3D19-202, Transcript of SH3 domain containing 19, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SH3D19, Length 4,888 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-202ENST00000409252 NOS1P29475 1434 aa11.17□□□□□ -0.62
SH3D19-202ENST00000409252 SENP3-EIF4A1A0A087X0R7 540 aa11.17□□□□□ -0.62
SH3D19-202ENST00000409252 COG3Q96JB2 828 aa11.17□□□□□ -0.62
SH3D19-202ENST00000409252 HECW2Q9P2P5 1572 aa11.16□□□□□ -0.62
SH3D19-202ENST00000409252 MBD5Q9P267 1494 aa11.16□□□□□ -0.62
SH3D19-202ENST00000409252 PANK3Q9H999 370 aa11.16□□□□□ -0.62
SH3D19-202ENST00000409252 MEX3CQ5U5Q3 659 aaKnown RBP11.16□□□□□ -0.62
SH3D19-202ENST00000409252 PNNQ9H307 717 aaKnown RBP11.16□□□□□ -0.62
SH3D19-202ENST00000409252 UHRF1BP1Q6BDS2 1440 aa11.16□□□□□ -0.62
SH3D19-202ENST00000409252 BCL11AQ9H165 835 aa11.15□□□□□ -0.62
SH3D19-202ENST00000409252 MLH3Q9UHC1 1453 aa11.15□□□□□ -0.62
SH3D19-202ENST00000409252 CGNL1Q0VF96 1302 aa11.15□□□□□ -0.62
SH3D19-202ENST00000409252 ADGRF5Q8IZF2 1346 aa11.15□□□□□ -0.63
SH3D19-202ENST00000409252 NBPF8Q3BBV2 869 aa11.14□□□□□ -0.63
SH3D19-202ENST00000409252 LTV1Q96GA3 475 aaPredicted RBP11.14□□□□□ -0.63
SH3D19-202ENST00000409252 PIP4K2BP78356 416 aa11.14□□□□□ -0.63
SH3D19-202ENST00000409252 GPRASP1Q5JY77 1395 aa11.14□□□□□ -0.63
SH3D19-202ENST00000409252 ABCA9Q8IUA7 1624 aa11.14□□□□□ -0.63
SH3D19-202ENST00000409252 ARAP3Q8WWN8 1544 aa11.14□□□□□ -0.63
SH3D19-202ENST00000409252 ADGBQ8N7X0 1667 aa11.13□□□□□ -0.63
SH3D19-202ENST00000409252 LAS1LQ9Y4W2 734 aaKnown RBP11.13□□□□□ -0.63
SH3D19-202ENST00000409252 MAST1Q9Y2H9 1570 aa11.13□□□□□ -0.63
SH3D19-202ENST00000409252 RIMS2Q9UQ26 1411 aa11.13□□□□□ -0.63
SH3D19-202ENST00000409252 AMOTL2Q9Y2J4 779 aa11.13□□□□□ -0.63
SH3D19-202ENST00000409252 RALBP1Q15311 655 aa11.13□□□□□ -0.63
SH3D19-202ENST00000409252 PMFBP1Q8TBY8 1022 aa11.12□□□□□ -0.63
SH3D19-202ENST00000409252 CDC42BPAQ5VT25 1732 aa11.12□□□□□ -0.63
SH3D19-202ENST00000409252 CDK19Q9BWU1 502 aa11.12□□□□□ -0.63
SH3D19-202ENST00000409252 U2AF1L5P0DN76 240 aaPredicted RBP11.11□□□□□ -0.63
SH3D19-202ENST00000409252 U2AF1Q01081 240 aaKnown RBP eCLIP11.11□□□□□ -0.63
SH3D19-202ENST00000409252 ARXQ96QS3 562 aa11.11□□□□□ -0.63
SH3D19-202ENST00000409252 EVA1CP58658 441 aa11.11□□□□□ -0.63
SH3D19-202ENST00000409252 ARHGEF12Q9NZN5 1544 aa11.1□□□□□ -0.63
SH3D19-202ENST00000409252 NCKAP5LQ9HCH0 1330 aa11.1□□□□□ -0.63
SH3D19-202ENST00000409252 NUTM2GQ5VZR2 741 aa11.1□□□□□ -0.63
SH3D19-202ENST00000409252 RBM33Q96EV2 1170 aaKnown RBP11.1□□□□□ -0.63
SH3D19-202ENST00000409252 WAPLQ7Z5K2 1190 aa11.1□□□□□ -0.63
SH3D19-202ENST00000409252 RPRD2Q5VT52 1461 aaKnown RBP11.1□□□□□ -0.63
SH3D19-202ENST00000409252 RTF1Q92541 710 aaKnown RBP11.09□□□□□ -0.63
SH3D19-202ENST00000409252 NLRP6P59044 892 aa11.08□□□□□ -0.64
SH3D19-202ENST00000409252 KIF7Q2M1P5 1343 aa11.07□□□□□ -0.64
SH3D19-202ENST00000409252 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.07□□□□□ -0.64
SH3D19-202ENST00000409252 DIP2BQ9P265 1576 aa11.07□□□□□ -0.64
SH3D19-202ENST00000409252 ABTB2Q8N961 1025 aa11.07□□□□□ -0.64
SH3D19-202ENST00000409252 KDM5DQ9BY66 1539 aa11.07□□□□□ -0.64
SH3D19-202ENST00000409252 PZPP20742 1482 aa11.06□□□□□ -0.64
SH3D19-202ENST00000409252 C14orf93Q9H972 538 aaKnown RBP11.06□□□□□ -0.64
SH3D19-202ENST00000409252 CCDC7Q96M83 1385 aa11.06□□□□□ -0.64
SH3D19-202ENST00000409252 CABP1Q9NZU7 370 aa11.06□□□□□ -0.64
SH3D19-202ENST00000409252 GGNBP2Q9H3C7 697 aa11.05□□□□□ -0.64
SH3D19-202ENST00000409252 XPCQ01831 940 aaPredicted RBP11.05□□□□□ -0.64
SH3D19-202ENST00000409252 ATAD2Q6PL18 1390 aa11.05□□□□□ -0.64
SH3D19-202ENST00000409252 NLRP13Q86W25 1043 aa11.04□□□□□ -0.64
SH3D19-202ENST00000409252 NPATQ14207 1427 aa11.04□□□□□ -0.64
SH3D19-202ENST00000409252 GLI2P10070 1586 aa11.04□□□□□ -0.64
SH3D19-202ENST00000409252 NUTM2BA6NNL0 878 aaPredicted RBP11.04□□□□□ -0.64
SH3D19-202ENST00000409252 NUTM2EB1AL46 878 aaPredicted RBP11.04□□□□□ -0.64
SH3D19-202ENST00000409252 NUTM2AQ8IVF1 878 aaPredicted RBP11.04□□□□□ -0.64
SH3D19-202ENST00000409252 NUDT16Q96DE0 195 aaKnown RBP11.04□□□□□ -0.64
SH3D19-202ENST00000409252 GCC2Q8IWJ2 1684 aa11.04□□□□□ -0.64
SH3D19-202ENST00000409252 CDC42BPBQ9Y5S2 1711 aa11.03□□□□□ -0.64
SH3D19-202ENST00000409252 MSH6P52701 1360 aa11.03□□□□□ -0.64
SH3D19-202ENST00000409252 SLC12A5Q9H2X9 1139 aa11.03□□□□□ -0.64
SH3D19-202ENST00000409252 ZNF692Q9BU19 519 aaPredicted RBP11.02□□□□□ -0.64
SH3D19-202ENST00000409252 MYBBP1AQ9BQG0 1328 aaKnown RBP11.02□□□□□ -0.65
SH3D19-202ENST00000409252 CCER2I3L3R5 266 aa11.02□□□□□ -0.65
SH3D19-202ENST00000409252 CCDC61Q9Y6R9 512 aa11.02□□□□□ -0.65
SH3D19-202ENST00000409252 SCAF11Q99590 1463 aaKnown RBP11.01□□□□□ -0.65
SH3D19-202ENST00000409252 CADPS2Q86UW7 1296 aa11.01□□□□□ -0.65
SH3D19-202ENST00000409252 PLXNC1O60486 1568 aa11□□□□□ -0.65
SH3D19-202ENST00000409252 UBAP1LF5GYI3 381 aa11□□□□□ -0.65
SH3D19-202ENST00000409252 WASLO00401 505 aaPredicted RBP11□□□□□ -0.65
SH3D19-202ENST00000409252 LRRIQ1Q96JM4 1722 aa11□□□□□ -0.65
SH3D19-202ENST00000409252 CFAP65Q6ZU64 1925 aaKnown RBP11□□□□□ -0.65
SH3D19-202ENST00000409252 NPHP1O15259 732 aa11□□□□□ -0.65
SH3D19-202ENST00000409252 PHF8Q9UPP1 1060 aa11□□□□□ -0.65
SH3D19-202ENST00000409252 TMEM2Q9UHN6 1383 aa10.99□□□□□ -0.65
SH3D19-202ENST00000409252 PHF23Q9BUL5 403 aaPredicted RBP10.99□□□□□ -0.65
SH3D19-202ENST00000409252 NLRP2Q9NX02 1062 aa10.99□□□□□ -0.65
SH3D19-202ENST00000409252 WASHC2AQ641Q2 1341 aa10.99□□□□□ -0.65
SH3D19-202ENST00000409252 TOM1O60784 492 aa10.98□□□□□ -0.65
SH3D19-202ENST00000409252 CCDC146Q8IYE0 955 aa10.98□□□□□ -0.65
SH3D19-202ENST00000409252 DIAPH1O60610 1272 aaKnown RBP10.98□□□□□ -0.65
SH3D19-202ENST00000409252 CALD1Q05682 793 aaKnown RBP10.98□□□□□ -0.65
SH3D19-202ENST00000409252 FOXO3O43524 673 aa10.97□□□□□ -0.65
SH3D19-202ENST00000409252 C1orf141Q5JVX7 400 aa10.97□□□□□ -0.65
SH3D19-202ENST00000409252 ERICH6Q7L0X2 663 aa10.97□□□□□ -0.65
SH3D19-202ENST00000409252 TBX22Q9Y458 520 aa10.97□□□□□ -0.65
SH3D19-202ENST00000409252 STRN4Q9NRL3 753 aa10.97□□□□□ -0.65
SH3D19-202ENST00000409252 ABCC3O15438 1527 aa10.97□□□□□ -0.65
SH3D19-202ENST00000409252 KCNA6P17658 529 aa10.97□□□□□ -0.65
SH3D19-202ENST00000409252 ERVK-7P63135 1459 aa10.96□□□□□ -0.65
SH3D19-202ENST00000409252 PRAG1Q86YV5 1406 aa10.96□□□□□ -0.65
SH3D19-202ENST00000409252 LRPPRCP42704 1394 aaKnown RBP10.96□□□□□ -0.66
SH3D19-202ENST00000409252 PRKRIP1Q9H875 184 aaPredicted RBP10.96□□□□□ -0.66
SH3D19-202ENST00000409252 PRDM11Q9NQV5 511 aa10.96□□□□□ -0.66
SH3D19-202ENST00000409252 USP35Q9P2H5 1018 aa10.96□□□□□ -0.66
SH3D19-202ENST00000409252 UGGT1Q9NYU2 1555 aa10.96□□□□□ -0.66
SH3D19-202ENST00000409252 LMOD3Q0VAK6 560 aa10.96□□□□□ -0.66
SH3D19-202ENST00000409252 RAPGEF4Q8WZA2 1011 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms