RNA–Protein interactions for RNA: ENST00000409114.7

PBRM1-206, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-206ENST00000409114 ST20-MTHFSA0A0A6YYL1 179 aa10.47□□□□□ -0.73
PBRM1-206ENST00000409114 DIAPH1O60610 1272 aaKnown RBP10.47□□□□□ -0.73
PBRM1-206ENST00000409114 PLEKHO1Q53GL0 409 aaPredicted RBP10.47□□□□□ -0.73
PBRM1-206ENST00000409114 MSH6P52701 1360 aa10.46□□□□□ -0.73
PBRM1-206ENST00000409114 CCDC141Q6ZP82 1450 aa10.46□□□□□ -0.73
PBRM1-206ENST00000409114 RBM33Q96EV2 1170 aaKnown RBP10.46□□□□□ -0.74
PBRM1-206ENST00000409114 PPP1R1BQ9UD71 204 aaPredicted RBP10.46□□□□□ -0.74
PBRM1-206ENST00000409114 TRIM34Q9BYJ4 488 aa10.46□□□□□ -0.74
PBRM1-206ENST00000409114 MCCP23508 829 aa10.45□□□□□ -0.74
PBRM1-206ENST00000409114 KCNH5Q8NCM2 988 aa10.45□□□□□ -0.74
PBRM1-206ENST00000409114 PRAM1Q96QH2 718 aa10.45□□□□□ -0.74
PBRM1-206ENST00000409114 ROCK1Q13464 1354 aa10.45□□□□□ -0.74
PBRM1-206ENST00000409114 HSP90AB1P08238 724 aaKnown RBP10.45□□□□□ -0.74
PBRM1-206ENST00000409114 AMOTL1Q8IY63 956 aa10.45□□□□□ -0.74
PBRM1-206ENST00000409114 KIF14Q15058 1648 aa10.45□□□□□ -0.74
PBRM1-206ENST00000409114 TMEM132EQ6IEE7 984 aa10.44□□□□□ -0.74
PBRM1-206ENST00000409114 TNRQ92752 1358 aa10.44□□□□□ -0.74
PBRM1-206ENST00000409114 FAM135AQ9P2D6 1515 aa10.44□□□□□ -0.74
PBRM1-206ENST00000409114 CEBPAP49715 358 aaPredicted RBP10.44□□□□□ -0.74
PBRM1-206ENST00000409114 LRRFIP1Q32MZ4 808 aaKnown RBP10.44□□□□□ -0.74
PBRM1-206ENST00000409114 PMFBP1Q8TBY8 1022 aa10.44□□□□□ -0.74
PBRM1-206ENST00000409114 NAP1L2Q9ULW6 460 aaPredicted RBP10.44□□□□□ -0.74
PBRM1-206ENST00000409114 SPG7Q9UQ90 795 aa10.44□□□□□ -0.74
PBRM1-206ENST00000409114 NUTM2GQ5VZR2 741 aa10.44□□□□□ -0.74
PBRM1-206ENST00000409114 KIAA1211Q6ZU35 1233 aa10.44□□□□□ -0.74
PBRM1-206ENST00000409114 BECN1Q14457 450 aa10.43□□□□□ -0.74
PBRM1-206ENST00000409114 UNC13AQ9UPW8 1703 aa10.43□□□□□ -0.74
PBRM1-206ENST00000409114 RTEL1-TNFRSF6BF6WH68 1400 aa10.43□□□□□ -0.74
PBRM1-206ENST00000409114 WWC1Q8IX03 1113 aa10.43□□□□□ -0.74
PBRM1-206ENST00000409114 PANK3Q9H999 370 aa10.43□□□□□ -0.74
PBRM1-206ENST00000409114 DNAJC5Q9H3Z4 198 aa10.42□□□□□ -0.74
PBRM1-206ENST00000409114 NGEFQ8N5V2 710 aa10.42□□□□□ -0.74
PBRM1-206ENST00000409114 ARHGEF11O15085 1522 aa10.42□□□□□ -0.74
PBRM1-206ENST00000409114 VPS37DQ86XT2 251 aa10.42□□□□□ -0.74
PBRM1-206ENST00000409114 CTDP1Q9Y5B0 961 aaPredicted RBP10.42□□□□□ -0.74
PBRM1-206ENST00000409114 CWC22Q9HCG8 908 aaKnown RBP10.41□□□□□ -0.74
PBRM1-206ENST00000409114 SLC4A10Q6U841 1118 aa10.41□□□□□ -0.74
PBRM1-206ENST00000409114 GAS2L2Q8NHY3 880 aa10.41□□□□□ -0.74
PBRM1-206ENST00000409114 NOP58Q9Y2X3 529 aaKnown RBP10.41□□□□□ -0.74
PBRM1-206ENST00000409114 WDR7Q9Y4E6 1490 aa10.41□□□□□ -0.74
PBRM1-206ENST00000409114 TULP1O00294 542 aaPredicted RBP10.41□□□□□ -0.74
PBRM1-206ENST00000409114 CFAP70Q5T0N1 1121 aa10.41□□□□□ -0.74
PBRM1-206ENST00000409114 SMC4Q9NTJ3 1288 aa10.41□□□□□ -0.74
PBRM1-206ENST00000409114 CABP2Q9NPB3 220 aa10.4□□□□□ -0.74
PBRM1-206ENST00000409114 GOLGA6L22H0YM25 854 aa10.4□□□□□ -0.74
PBRM1-206ENST00000409114 ADAMTS2O95450 1211 aa10.4□□□□□ -0.74
PBRM1-206ENST00000409114 CNTLNQ9NXG0 1405 aa10.4□□□□□ -0.75
PBRM1-206ENST00000409114 USP47Q96K76 1375 aa10.39□□□□□ -0.75
PBRM1-206ENST00000409114 RBM42Q9BTD8 480 aaKnown RBP10.39□□□□□ -0.75
PBRM1-206ENST00000409114 RBM19Q9Y4C8 960 aaKnown RBP10.39□□□□□ -0.75
PBRM1-206ENST00000409114 ERBINQ96RT1 1412 aa10.39□□□□□ -0.75
PBRM1-206ENST00000409114 AMOTL2Q9Y2J4 779 aa10.39□□□□□ -0.75
PBRM1-206ENST00000409114 WDR62O43379 1518 aa10.39□□□□□ -0.75
PBRM1-206ENST00000409114 ATAD2Q6PL18 1390 aa10.39□□□□□ -0.75
PBRM1-206ENST00000409114 KIF6Q6ZMV9 814 aa10.38□□□□□ -0.75
PBRM1-206ENST00000409114 CDK19Q9BWU1 502 aa10.38□□□□□ -0.75
PBRM1-206ENST00000409114 DAPK1P53355 1430 aa10.38□□□□□ -0.75
PBRM1-206ENST00000409114 CCER2I3L3R5 266 aa10.38□□□□□ -0.75
PBRM1-206ENST00000409114 CCDC61Q9Y6R9 512 aa10.38□□□□□ -0.75
PBRM1-206ENST00000409114 DHX29Q7Z478 1369 aaKnown RBP10.38□□□□□ -0.75
PBRM1-206ENST00000409114 NAP1L5Q96NT1 182 aaPredicted RBP10.38□□□□□ -0.75
PBRM1-206ENST00000409114 C9orf78Q9NZ63 289 aaPredicted RBP10.38□□□□□ -0.75
PBRM1-206ENST00000409114 LMTK3Q96Q04 1460 aa10.37□□□□□ -0.75
PBRM1-206ENST00000409114 EIF2S2P20042 333 aaKnown RBP10.37□□□□□ -0.75
PBRM1-206ENST00000409114 ITPRIPQ8IWB1 547 aa10.37□□□□□ -0.75
PBRM1-206ENST00000409114 PHF8Q9UPP1 1060 aa10.37□□□□□ -0.75
PBRM1-206ENST00000409114 ZNF518AQ6AHZ1 1483 aa10.37□□□□□ -0.75
PBRM1-206ENST00000409114 DDX54Q8TDD1 881 aaKnown RBP10.37□□□□□ -0.75
PBRM1-206ENST00000409114 FBXW7Q969H0 707 aa10.36□□□□□ -0.75
PBRM1-206ENST00000409114 UHRF1BP1Q6BDS2 1440 aa10.36□□□□□ -0.75
PBRM1-206ENST00000409114 CABP4P57796 275 aa10.36□□□□□ -0.75
PBRM1-206ENST00000409114 TSHZ2Q9NRE2 1034 aa10.36□□□□□ -0.75
PBRM1-206ENST00000409114 SUPT6HQ7KZ85 1726 aaKnown RBP10.36□□□□□ -0.75
PBRM1-206ENST00000409114 PNISRQ8TF01 805 aaKnown RBP10.36□□□□□ -0.75
PBRM1-206ENST00000409114 GNL2Q13823 731 aaKnown RBP10.35□□□□□ -0.75
PBRM1-206ENST00000409114 IRX6P78412 446 aaPredicted RBP10.35□□□□□ -0.75
PBRM1-206ENST00000409114 ARAP1Q96P48 1450 aa10.35□□□□□ -0.75
PBRM1-206ENST00000409114 CDK13Q14004 1512 aaKnown RBP10.35□□□□□ -0.75
PBRM1-206ENST00000409114 PLCH2O75038 1416 aa10.35□□□□□ -0.75
PBRM1-206ENST00000409114 NPHP3Q7Z494 1330 aa10.35□□□□□ -0.75
PBRM1-206ENST00000409114 TRIM44Q96DX7 344 aaPredicted RBP10.35□□□□□ -0.75
PBRM1-206ENST00000409114 RWDD1Q9H446 243 aaPredicted RBP10.35□□□□□ -0.75
PBRM1-206ENST00000409114 MYBBP1AQ9BQG0 1328 aaKnown RBP10.34□□□□□ -0.75
PBRM1-206ENST00000409114 GGNBP2Q9H3C7 697 aa10.34□□□□□ -0.75
PBRM1-206ENST00000409114 NBPF8Q3BBV2 869 aa10.34□□□□□ -0.75
PBRM1-206ENST00000409114 NBPF14Q5TI25 921 aa10.34□□□□□ -0.75
PBRM1-206ENST00000409114 TSPYL4Q9UJ04 414 aa10.34□□□□□ -0.75
PBRM1-206ENST00000409114 UHRF1BP1LA0JNW5 1464 aa10.34□□□□□ -0.75
PBRM1-206ENST00000409114 KIAA1107Q9UPP5 1409 aa10.34□□□□□ -0.75
PBRM1-206ENST00000409114 PRKCSHP14314 528 aaPredicted RBP10.34□□□□□ -0.75
PBRM1-206ENST00000409114 CLSTN1O94985 981 aa10.33□□□□□ -0.76
PBRM1-206ENST00000409114 GNAI1P63096 354 aa10.33□□□□□ -0.76
PBRM1-206ENST00000409114 SENP3-EIF4A1A0A087X0R7 540 aa10.33□□□□□ -0.76
PBRM1-206ENST00000409114 WDHD1O75717 1129 aaPredicted RBP10.33□□□□□ -0.76
PBRM1-206ENST00000409114 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.33□□□□□ -0.76
PBRM1-206ENST00000409114 TAOK2Q9UL54 1235 aa10.33□□□□□ -0.76
PBRM1-206ENST00000409114 FBXO31Q5XUX0 539 aaPredicted RBP10.33□□□□□ -0.76
PBRM1-206ENST00000409114 RIC3Q7Z5B4 369 aa10.33□□□□□ -0.76
PBRM1-206ENST00000409114 ABCC2Q92887 1545 aa10.33□□□□□ -0.76
PBRM1-206ENST00000409114 APBB1O00213 710 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms