RNA–Protein interactions for RNA: ENST00000409064.5

KDM3A-202, Transcript of lysine demethylase 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM3A, Length 4,621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-202ENST00000409064 EIF2S2P20042 333 aaKnown RBP12.8□□□□□ -0.36
KDM3A-202ENST00000409064 SMC4Q9NTJ3 1288 aa12.79□□□□□ -0.36
KDM3A-202ENST00000409064 PPP1R1BQ9UD71 204 aaPredicted RBP12.79□□□□□ -0.36
KDM3A-202ENST00000409064 USP47Q96K76 1375 aa12.78□□□□□ -0.36
KDM3A-202ENST00000409064 CCDC7Q96M83 1385 aa12.78□□□□□ -0.36
KDM3A-202ENST00000409064 FBXO31Q5XUX0 539 aaPredicted RBP12.78□□□□□ -0.36
KDM3A-202ENST00000409064 HDAC5Q9UQL6 1122 aa12.78□□□□□ -0.36
KDM3A-202ENST00000409064 DIAPH1O60610 1272 aaKnown RBP12.78□□□□□ -0.36
KDM3A-202ENST00000409064 ITPRIPQ8IWB1 547 aa12.78□□□□□ -0.36
KDM3A-202ENST00000409064 ANP32BQ92688 251 aaKnown RBP12.77□□□□□ -0.36
KDM3A-202ENST00000409064 CLUAP1Q96AJ1 413 aa12.77□□□□□ -0.36
KDM3A-202ENST00000409064 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.77□□□□□ -0.37
KDM3A-202ENST00000409064 TPRNQ4KMQ1 711 aa12.76□□□□□ -0.37
KDM3A-202ENST00000409064 TOM1L2Q6ZVM7 507 aa12.76□□□□□ -0.37
KDM3A-202ENST00000409064 ARHGEF11O15085 1522 aa12.75□□□□□ -0.37
KDM3A-202ENST00000409064 NAIPQ13075 1403 aa12.75□□□□□ -0.37
KDM3A-202ENST00000409064 NECTIN2Q92692 538 aa12.75□□□□□ -0.37
KDM3A-202ENST00000409064 CDK11BP21127 795 aaKnown RBP12.75□□□□□ -0.37
KDM3A-202ENST00000409064 PPP6R1Q9UPN7 881 aa12.75□□□□□ -0.37
KDM3A-202ENST00000409064 ADGRL1O94910 1474 aa12.75□□□□□ -0.37
KDM3A-202ENST00000409064 IQGAP2Q13576 1575 aa12.75□□□□□ -0.37
KDM3A-202ENST00000409064 ADAMTS2O95450 1211 aa12.74□□□□□ -0.37
KDM3A-202ENST00000409064 HMOX1P09601 288 aa12.74□□□□□ -0.37
KDM3A-202ENST00000409064 EHBP1L1Q8N3D4 1523 aa12.74□□□□□ -0.37
KDM3A-202ENST00000409064 CDK13Q14004 1512 aaKnown RBP12.73□□□□□ -0.37
KDM3A-202ENST00000409064 UBAP1LF5GYI3 381 aa12.73□□□□□ -0.37
KDM3A-202ENST00000409064 DDRGK1Q96HY6 314 aa12.73□□□□□ -0.37
KDM3A-202ENST00000409064 ZC3H6P61129 1189 aaKnown RBP12.73□□□□□ -0.37
KDM3A-202ENST00000409064 PDE3BQ13370 1112 aa12.73□□□□□ -0.37
KDM3A-202ENST00000409064 DDX54Q8TDD1 881 aaKnown RBP12.73□□□□□ -0.37
KDM3A-202ENST00000409064 HSPA2P54652 639 aa12.73□□□□□ -0.37
KDM3A-202ENST00000409064 NEXNQ0ZGT2 675 aa12.72□□□□□ -0.37
KDM3A-202ENST00000409064 KIF7Q2M1P5 1343 aa12.72□□□□□ -0.37
KDM3A-202ENST00000409064 IPO9Q96P70 1041 aaKnown RBP12.72□□□□□ -0.37
KDM3A-202ENST00000409064 MIA2Q96PC5 1412 aa12.72□□□□□ -0.37
KDM3A-202ENST00000409064 CABP1Q9NZU7 370 aa12.72□□□□□ -0.37
KDM3A-202ENST00000409064 SUPT6HQ7KZ85 1726 aaKnown RBP12.72□□□□□ -0.37
KDM3A-202ENST00000409064 DENND4BO75064 1496 aaPredicted RBP12.72□□□□□ -0.37
KDM3A-202ENST00000409064 CDK19Q9BWU1 502 aa12.71□□□□□ -0.37
KDM3A-202ENST00000409064 CFAP43Q8NDM7 1665 aa12.71□□□□□ -0.37
KDM3A-202ENST00000409064 NBPF1Q3BBV0 1214 aa12.71□□□□□ -0.38
KDM3A-202ENST00000409064 NGLY1Q96IV0 654 aa12.71□□□□□ -0.38
KDM3A-202ENST00000409064 FOXO3O43524 673 aa12.7□□□□□ -0.38
KDM3A-202ENST00000409064 EIF5BO60841 1220 aaKnown RBP12.7□□□□□ -0.38
KDM3A-202ENST00000409064 RBM42Q9BTD8 480 aaKnown RBP12.7□□□□□ -0.38
KDM3A-202ENST00000409064 EPRSP07814 1512 aaKnown RBP12.7□□□□□ -0.38
KDM3A-202ENST00000409064 PTPN23Q9H3S7 1636 aa12.7□□□□□ -0.38
KDM3A-202ENST00000409064 NCLP19338 710 aaKnown RBP12.7□□□□□ -0.38
KDM3A-202ENST00000409064 AKNAQ7Z591 1439 aa12.7□□□□□ -0.38
KDM3A-202ENST00000409064 IDI1Q13907 227 aa12.69□□□□□ -0.38
KDM3A-202ENST00000409064 BECN1Q14457 450 aa12.69□□□□□ -0.38
KDM3A-202ENST00000409064 TCERG1O14776 1098 aaKnown RBP12.69□□□□□ -0.38
KDM3A-202ENST00000409064 SLC12A5Q9H2X9 1139 aa12.69□□□□□ -0.38
KDM3A-202ENST00000409064 CUL7Q14999 1698 aa12.69□□□□□ -0.38
KDM3A-202ENST00000409064 BCL2L13Q9BXK5 485 aa12.69□□□□□ -0.38
KDM3A-202ENST00000409064 ZRSR1Q15695 479 aaKnown RBP12.68□□□□□ -0.38
KDM3A-202ENST00000409064 KIAA1211Q6ZU35 1233 aa12.68□□□□□ -0.38
KDM3A-202ENST00000409064 HMMRO75330 724 aa12.68□□□□□ -0.38
KDM3A-202ENST00000409064 RIPK4P57078 832 aa12.68□□□□□ -0.38
KDM3A-202ENST00000409064 RCAN3Q9UKA8 241 aa12.68□□□□□ -0.38
KDM3A-202ENST00000409064 AMOTL2Q9Y2J4 779 aa12.68□□□□□ -0.38
KDM3A-202ENST00000409064 CCDC184Q52MB2 194 aa12.68□□□□□ -0.38
KDM3A-202ENST00000409064 APAF1O14727 1248 aa12.67□□□□□ -0.38
KDM3A-202ENST00000409064 TOM1O60784 492 aa12.67□□□□□ -0.38
KDM3A-202ENST00000409064 TATP17735 454 aaPredicted RBP12.67□□□□□ -0.38
KDM3A-202ENST00000409064 FAM177BA6PVY3 158 aa12.67□□□□□ -0.38
KDM3A-202ENST00000409064 WAPLQ7Z5K2 1190 aa12.67□□□□□ -0.38
KDM3A-202ENST00000409064 C9orf78Q9NZ63 289 aaPredicted RBP12.67□□□□□ -0.38
KDM3A-202ENST00000409064 ZNF692Q9BU19 519 aaPredicted RBP12.66□□□□□ -0.38
KDM3A-202ENST00000409064 MYBBP1AQ9BQG0 1328 aaKnown RBP12.66□□□□□ -0.38
KDM3A-202ENST00000409064 FANCAO15360 1455 aa12.66□□□□□ -0.38
KDM3A-202ENST00000409064 ASXL2Q76L83 1435 aa12.66□□□□□ -0.38
KDM3A-202ENST00000409064 HECW1Q76N89 1606 aa12.66□□□□□ -0.38
KDM3A-202ENST00000409064 FBXW7Q969H0 707 aa12.65□□□□□ -0.38
KDM3A-202ENST00000409064 RPGRIP1LQ68CZ1 1315 aa12.65□□□□□ -0.38
KDM3A-202ENST00000409064 AIMP1Q12904 312 aaKnown RBP12.65□□□□□ -0.38
KDM3A-202ENST00000409064 TSPYL4Q9UJ04 414 aa12.65□□□□□ -0.38
KDM3A-202ENST00000409064 RTEL1-TNFRSF6BF6WH68 1400 aa12.65□□□□□ -0.38
KDM3A-202ENST00000409064 TOMM22Q9NS69 142 aa12.65□□□□□ -0.38
KDM3A-202ENST00000409064 ERBINQ96RT1 1412 aa12.65□□□□□ -0.39
KDM3A-202ENST00000409064 DDX58O95786 925 aaKnown RBP12.65□□□□□ -0.39
KDM3A-202ENST00000409064 CCDC61Q9Y6R9 512 aa12.65□□□□□ -0.39
KDM3A-202ENST00000409064 MTHFSP49914 203 aa12.64□□□□□ -0.39
KDM3A-202ENST00000409064 PLEKHO1Q53GL0 409 aaPredicted RBP12.64□□□□□ -0.39
KDM3A-202ENST00000409064 NBPF8Q3BBV2 869 aa12.64□□□□□ -0.39
KDM3A-202ENST00000409064 GPATCH3Q96I76 525 aa12.64□□□□□ -0.39
KDM3A-202ENST00000409064 PTPRKQ15262 1439 aa12.63□□□□□ -0.39
KDM3A-202ENST00000409064 TRIM6-TRIM34B2RNG4 842 aa12.63□□□□□ -0.39
KDM3A-202ENST00000409064 FKBP5Q13451 457 aaPredicted RBP12.63□□□□□ -0.39
KDM3A-202ENST00000409064 VPS37DQ86XT2 251 aa12.63□□□□□ -0.39
KDM3A-202ENST00000409064 MCCP23508 829 aa12.62□□□□□ -0.39
KDM3A-202ENST00000409064 RWDD1Q9H446 243 aaPredicted RBP12.62□□□□□ -0.39
KDM3A-202ENST00000409064 ANKRD30BQ9BXX2 1392 aa12.62□□□□□ -0.39
KDM3A-202ENST00000409064 NUDT16Q96DE0 195 aaKnown RBP12.62□□□□□ -0.39
KDM3A-202ENST00000409064 CCDC141Q6ZP82 1450 aa12.62□□□□□ -0.39
KDM3A-202ENST00000409064 CADPS2Q86UW7 1296 aa12.61□□□□□ -0.39
KDM3A-202ENST00000409064 GOLGA6L22H0YM25 854 aa12.61□□□□□ -0.39
KDM3A-202ENST00000409064 TEX14Q8IWB6 1497 aa12.6□□□□□ -0.39
KDM3A-202ENST00000409064 SMG6Q86US8 1419 aaKnown RBP12.6□□□□□ -0.39
KDM3A-202ENST00000409064 RRP1P56182 461 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms