RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 UGGT1Q9NYU2 1555 aa22.56■■□□□ 1.2
NUP50-203ENST00000407019 MAP3K4Q9Y6R4 1608 aa22.55■■□□□ 1.2
NUP50-203ENST00000407019 OSCARQ8IYS5 282 aa22.54■■□□□ 1.2
NUP50-203ENST00000407019 PDE3BQ13370 1112 aa22.54■■□□□ 1.2
NUP50-203ENST00000407019 KIF1BO60333 1816 aa22.54■■□□□ 1.2
NUP50-203ENST00000407019 BLMP54132 1417 aaPredicted RBP22.54■■□□□ 1.2
NUP50-203ENST00000407019 CD109Q6YHK3 1445 aa22.53■■□□□ 1.2
NUP50-203ENST00000407019 POGZQ7Z3K3 1410 aa22.52■■□□□ 1.2
NUP50-203ENST00000407019 ABCA6Q8N139 1617 aa22.52■■□□□ 1.2
NUP50-203ENST00000407019 KNSTRNQ9Y448 316 aa22.51■■□□□ 1.19
NUP50-203ENST00000407019 IFT172Q9UG01 1749 aa22.51■■□□□ 1.19
NUP50-203ENST00000407019 MROH2AA6NES4 1674 aa22.49■■□□□ 1.19
NUP50-203ENST00000407019 MLH3Q9UHC1 1453 aa22.49■■□□□ 1.19
NUP50-203ENST00000407019 MYOM1P52179 1685 aa22.48■■□□□ 1.19
NUP50-203ENST00000407019 HECW2Q9P2P5 1572 aa22.48■■□□□ 1.19
NUP50-203ENST00000407019 ANP32EQ9BTT0 268 aa22.48■■□□□ 1.19
NUP50-203ENST00000407019 SALL2Q9Y467 1007 aaPredicted RBP22.48■■□□□ 1.19
NUP50-203ENST00000407019 ADGRF5Q8IZF2 1346 aa22.47■■□□□ 1.19
NUP50-203ENST00000407019 KDM5AP29375 1690 aaKnown RBP22.47■■□□□ 1.19
NUP50-203ENST00000407019 FRMPD1Q5SYB0 1578 aa22.47■■□□□ 1.19
NUP50-203ENST00000407019 ASXL1Q8IXJ9 1541 aa22.47■■□□□ 1.19
NUP50-203ENST00000407019 CFAP70Q5T0N1 1121 aa22.46■■□□□ 1.19
NUP50-203ENST00000407019 NRXN1Q9ULB1 1477 aa22.46■■□□□ 1.19
NUP50-203ENST00000407019 ADGRB3O60242 1522 aa22.46■■□□□ 1.19
NUP50-203ENST00000407019 AMER1Q5JTC6 1135 aaPredicted RBP22.46■■□□□ 1.19
NUP50-203ENST00000407019 CCDC136Q96JN2 1154 aa22.46■■□□□ 1.19
NUP50-203ENST00000407019 FANCIQ9NVI1 1328 aa22.46■■□□□ 1.19
NUP50-203ENST00000407019 SLC24A1O60721 1099 aa22.45■■□□□ 1.18
NUP50-203ENST00000407019 RRP1P56182 461 aaKnown RBP22.45■■□□□ 1.18
NUP50-203ENST00000407019 RCAN3Q9UKA8 241 aa22.45■■□□□ 1.18
NUP50-203ENST00000407019 PPP2R1AP30153 589 aa22.43■■□□□ 1.18
NUP50-203ENST00000407019 NPC1L1Q9UHC9 1359 aa22.43■■□□□ 1.18
NUP50-203ENST00000407019 NPATQ14207 1427 aa22.41■■□□□ 1.18
NUP50-203ENST00000407019 ERVK-7P63135 1459 aa22.41■■□□□ 1.18
NUP50-203ENST00000407019 MYO3AQ8NEV4 1616 aa22.4■■□□□ 1.18
NUP50-203ENST00000407019 NOS1P29475 1434 aa22.4■■□□□ 1.18
NUP50-203ENST00000407019 PIK3C2GO75747 1445 aa22.39■■□□□ 1.18
NUP50-203ENST00000407019 CDCA7LQ96GN5 454 aa22.38■■□□□ 1.17
NUP50-203ENST00000407019 SETBP1Q9Y6X0 1596 aa22.38■■□□□ 1.17
NUP50-203ENST00000407019 NEO1Q92859 1461 aa22.38■■□□□ 1.17
NUP50-203ENST00000407019 GGT6Q6P531 493 aa22.38■■□□□ 1.17
NUP50-203ENST00000407019 ADAMTS8Q9UP79 889 aa22.38■■□□□ 1.17
NUP50-203ENST00000407019 WDR43Q15061 677 aaKnown RBP eCLIP22.37■■□□□ 1.17
NUP50-203ENST00000407019 ABCC3O15438 1527 aa22.37■■□□□ 1.17
NUP50-203ENST00000407019 CHGAP10645 457 aaKnown RBP22.37■■□□□ 1.17
NUP50-203ENST00000407019 SBNO2Q9Y2G9 1366 aa22.36■■□□□ 1.17
NUP50-203ENST00000407019 PPLO60437 1756 aa22.35■■□□□ 1.17
NUP50-203ENST00000407019 CAMSAP1Q5T5Y3 1602 aa22.33■■□□□ 1.16
NUP50-203ENST00000407019 MSH5O43196 834 aa22.32■■□□□ 1.16
NUP50-203ENST00000407019 EXOC6Q8TAG9 804 aa22.31■■□□□ 1.16
NUP50-203ENST00000407019 RPGRIP1LQ68CZ1 1315 aa22.31■■□□□ 1.16
NUP50-203ENST00000407019 CENPJQ9HC77 1338 aaPredicted RBP22.31■■□□□ 1.16
NUP50-203ENST00000407019 DIP2CQ9Y2E4 1556 aa22.29■■□□□ 1.16
NUP50-203ENST00000407019 C14orf93Q9H972 538 aaKnown RBP22.29■■□□□ 1.16
NUP50-203ENST00000407019 RAPGEF3O95398 923 aa22.28■■□□□ 1.16
NUP50-203ENST00000407019 ADGRB1O14514 1584 aa22.28■■□□□ 1.16
NUP50-203ENST00000407019 ZC3H13Q5T200 1668 aaKnown RBP22.27■■□□□ 1.16
NUP50-203ENST00000407019 CFAP65Q6ZU64 1925 aaKnown RBP22.27■■□□□ 1.15
NUP50-203ENST00000407019 PLEKHH1Q9ULM0 1364 aa22.26■■□□□ 1.15
NUP50-203ENST00000407019 CARD14Q9BXL6 1004 aa22.26■■□□□ 1.15
NUP50-203ENST00000407019 PIK3C2BO00750 1634 aa22.25■■□□□ 1.15
NUP50-203ENST00000407019 QRICH2Q9H0J4 1663 aa22.25■■□□□ 1.15
NUP50-203ENST00000407019 SIGLEC1Q9BZZ2 1709 aa22.25■■□□□ 1.15
NUP50-203ENST00000407019 TRAK1Q9UPV9 953 aa22.24■■□□□ 1.15
NUP50-203ENST00000407019 RICTORQ6R327 1708 aa22.24■■□□□ 1.15
NUP50-203ENST00000407019 ZNF521Q96K83 1311 aa22.23■■□□□ 1.15
NUP50-203ENST00000407019 ARHGAP31Q2M1Z3 1444 aa22.22■■□□□ 1.15
NUP50-203ENST00000407019 GOLGA2Q08379 1002 aa22.19■■□□□ 1.14
NUP50-203ENST00000407019 NEXMIFQ5QGS0 1516 aa22.19■■□□□ 1.14
NUP50-203ENST00000407019 PLIN1O60240 522 aa22.19■■□□□ 1.14
NUP50-203ENST00000407019 DUSP27Q5VZP5 1158 aa22.19■■□□□ 1.14
NUP50-203ENST00000407019 GLI2P10070 1586 aa22.18■■□□□ 1.14
NUP50-203ENST00000407019 TMEM132EQ6IEE7 984 aa22.18■■□□□ 1.14
NUP50-203ENST00000407019 ERICH6Q7L0X2 663 aa22.18■■□□□ 1.14
NUP50-203ENST00000407019 NSD3Q9BZ95 1437 aa22.17■■□□□ 1.14
NUP50-203ENST00000407019 VGFO15240 615 aaPredicted RBP22.17■■□□□ 1.14
NUP50-203ENST00000407019 CCDC146Q8IYE0 955 aa22.16■■□□□ 1.14
NUP50-203ENST00000407019 YEATS2Q9ULM3 1422 aa22.16■■□□□ 1.14
NUP50-203ENST00000407019 CRBNQ96SW2 442 aa22.15■■□□□ 1.14
NUP50-203ENST00000407019 POLR3AO14802 1390 aaPredicted RBP22.15■■□□□ 1.14
NUP50-203ENST00000407019 USP32Q8NFA0 1604 aa22.13■■□□□ 1.13
NUP50-203ENST00000407019 SLFN5Q08AF3 891 aa22.13■■□□□ 1.13
NUP50-203ENST00000407019 ARHGEF28Q8N1W1 1705 aaKnown RBP22.13■■□□□ 1.13
NUP50-203ENST00000407019 APAF1O14727 1248 aa22.12■■□□□ 1.13
NUP50-203ENST00000407019 SLC12A5Q9H2X9 1139 aa22.12■■□□□ 1.13
NUP50-203ENST00000407019 TCERG1O14776 1098 aaKnown RBP22.11■■□□□ 1.13
NUP50-203ENST00000407019 NUTM2DQ5VT03 806 aaPredicted RBP22.11■■□□□ 1.13
NUP50-203ENST00000407019 NGEFQ8N5V2 710 aa22.11■■□□□ 1.13
NUP50-203ENST00000407019 PUS7Q96PZ0 661 aaKnown RBP22.11■■□□□ 1.13
NUP50-203ENST00000407019 SLC52A1Q9NWF4 448 aa22.11■■□□□ 1.13
NUP50-203ENST00000407019 IDI1Q13907 227 aa22.1■■□□□ 1.13
NUP50-203ENST00000407019 MORC1Q86VD1 984 aa22.1■■□□□ 1.13
NUP50-203ENST00000407019 ZFYVE9O95405 1425 aa22.1■■□□□ 1.13
NUP50-203ENST00000407019 TRMT2AQ8IZ69 625 aaKnown RBP22.1■■□□□ 1.13
NUP50-203ENST00000407019 EVC2Q86UK5 1308 aa22.1■■□□□ 1.13
NUP50-203ENST00000407019 TULP4Q9NRJ4 1543 aa22.09■■□□□ 1.13
NUP50-203ENST00000407019 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.08■■□□□ 1.12
NUP50-203ENST00000407019 PREX1Q8TCU6 1659 aa22.08■■□□□ 1.12
NUP50-203ENST00000407019 C20orf194Q5TEA3 1177 aa22.07■■□□□ 1.12
NUP50-203ENST00000407019 NKTRP30414 1462 aaKnown RBP22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms