RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 FAM135AQ9P2D6 1515 aa20.9■□□□□ 0.94
COL4A3BP-204ENST00000405807 RGL3Q3MIN7 710 aa20.9■□□□□ 0.94
COL4A3BP-204ENST00000405807 PDCL3Q9H2J4 239 aa20.89■□□□□ 0.94
COL4A3BP-204ENST00000405807 DISP3Q9P2K9 1392 aa20.89■□□□□ 0.93
COL4A3BP-204ENST00000405807 TMF1P82094 1093 aa20.89■□□□□ 0.93
COL4A3BP-204ENST00000405807 C20orf194Q5TEA3 1177 aa20.89■□□□□ 0.93
COL4A3BP-204ENST00000405807 EIF4G3O43432 1585 aaKnown RBP20.88■□□□□ 0.93
COL4A3BP-204ENST00000405807 FAM161AQ3B820 660 aa20.88■□□□□ 0.93
COL4A3BP-204ENST00000405807 CHMP7Q8WUX9 453 aaPredicted RBP20.87■□□□□ 0.93
COL4A3BP-204ENST00000405807 ARHGEF5Q12774 1597 aa20.87■□□□□ 0.93
COL4A3BP-204ENST00000405807 ERBINQ96RT1 1412 aa20.87■□□□□ 0.93
COL4A3BP-204ENST00000405807 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.86■□□□□ 0.93
COL4A3BP-204ENST00000405807 ADAMTS8Q9UP79 889 aa20.86■□□□□ 0.93
COL4A3BP-204ENST00000405807 LAMC1P11047 1609 aa20.86■□□□□ 0.93
COL4A3BP-204ENST00000405807 JPH4Q96JJ6 628 aa20.86■□□□□ 0.93
COL4A3BP-204ENST00000405807 PRDM15P57071 1507 aaPredicted RBP20.85■□□□□ 0.93
COL4A3BP-204ENST00000405807 SLC4A3P48751 1232 aa20.84■□□□□ 0.93
COL4A3BP-204ENST00000405807 DUSP27Q5VZP5 1158 aa20.83■□□□□ 0.93
COL4A3BP-204ENST00000405807 ATP10BO94823 1461 aa20.83■□□□□ 0.93
COL4A3BP-204ENST00000405807 A2MP01023 1474 aa20.83■□□□□ 0.92
COL4A3BP-204ENST00000405807 WDR43Q15061 677 aaKnown RBP eCLIP20.82■□□□□ 0.92
COL4A3BP-204ENST00000405807 C8orf34Q49A92 452 aa20.82■□□□□ 0.92
COL4A3BP-204ENST00000405807 CCDC141Q6ZP82 1450 aa20.81■□□□□ 0.92
COL4A3BP-204ENST00000405807 GOLGA2Q08379 1002 aa20.81■□□□□ 0.92
COL4A3BP-204ENST00000405807 ABCA8O94911 1581 aa20.8■□□□□ 0.92
COL4A3BP-204ENST00000405807 PLA2R1Q13018 1463 aa20.79■□□□□ 0.92
COL4A3BP-204ENST00000405807 EIF2AK4Q9P2K8 1649 aaKnown RBP20.79■□□□□ 0.92
COL4A3BP-204ENST00000405807 SYNJ2O15056 1496 aa20.79■□□□□ 0.92
COL4A3BP-204ENST00000405807 NUP160Q12769 1436 aa20.78■□□□□ 0.92
COL4A3BP-204ENST00000405807 KNSTRNQ9Y448 316 aa20.78■□□□□ 0.92
COL4A3BP-204ENST00000405807 PLEKHH1Q9ULM0 1364 aa20.78■□□□□ 0.92
COL4A3BP-204ENST00000405807 PPP2R1AP30153 589 aa20.77■□□□□ 0.92
COL4A3BP-204ENST00000405807 ZFP91Q96JP5 570 aaPredicted RBP20.77■□□□□ 0.92
COL4A3BP-204ENST00000405807 ZNF521Q96K83 1311 aa20.77■□□□□ 0.92
COL4A3BP-204ENST00000405807 FBLN2P98095 1184 aa20.76■□□□□ 0.91
COL4A3BP-204ENST00000405807 CLCN1P35523 988 aa20.76■□□□□ 0.91
COL4A3BP-204ENST00000405807 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.75■□□□□ 0.912e-6■■■■□ 20.7
COL4A3BP-204ENST00000405807 SLFN5Q08AF3 891 aa20.73■□□□□ 0.91
COL4A3BP-204ENST00000405807 PLCD3Q8N3E9 789 aa20.73■□□□□ 0.91
COL4A3BP-204ENST00000405807 EIF3AQ14152 1382 aaKnown RBP20.72■□□□□ 0.91
COL4A3BP-204ENST00000405807 UNC13BO14795 1591 aa20.71■□□□□ 0.91
COL4A3BP-204ENST00000405807 SAMD9LQ8IVG5 1584 aa20.71■□□□□ 0.91
COL4A3BP-204ENST00000405807 CDCA8Q53HL2 280 aa20.7■□□□□ 0.9
COL4A3BP-204ENST00000405807 MAGI2Q86UL8 1455 aa20.7■□□□□ 0.9
COL4A3BP-204ENST00000405807 WDR7Q9Y4E6 1490 aa20.7■□□□□ 0.9
COL4A3BP-204ENST00000405807 FRAT2O75474 233 aaPredicted RBP20.7■□□□□ 0.9
COL4A3BP-204ENST00000405807 AMER1Q5JTC6 1135 aaPredicted RBP20.7■□□□□ 0.9
COL4A3BP-204ENST00000405807 FTSJ3Q8IY81 847 aaKnown RBP20.7■□□□□ 0.9
COL4A3BP-204ENST00000405807 ZHX1Q9UKY1 873 aaPredicted RBP20.7■□□□□ 0.9
COL4A3BP-204ENST00000405807 TRMT2AQ8IZ69 625 aaKnown RBP20.69■□□□□ 0.9
COL4A3BP-204ENST00000405807 CLASP1Q7Z460 1538 aa20.69■□□□□ 0.9
COL4A3BP-204ENST00000405807 ATP10AO60312 1499 aa20.68■□□□□ 0.9
COL4A3BP-204ENST00000405807 SAMD1Q6SPF0 538 aaPredicted RBP20.67■□□□□ 0.9
COL4A3BP-204ENST00000405807 MYO5CQ9NQX4 1742 aa20.67■□□□□ 0.9
COL4A3BP-204ENST00000405807 PIK3C2GO75747 1445 aa20.66■□□□□ 0.9
COL4A3BP-204ENST00000405807 MAST1Q9Y2H9 1570 aa20.65■□□□□ 0.9
COL4A3BP-204ENST00000405807 IQGAP3Q86VI3 1631 aa20.65■□□□□ 0.9
COL4A3BP-204ENST00000405807 NCLP19338 710 aaKnown RBP20.65■□□□□ 0.9
COL4A3BP-204ENST00000405807 PREX2Q70Z35 1606 aa20.65■□□□□ 0.9
COL4A3BP-204ENST00000405807 ZNF830Q96NB3 372 aaPredicted RBP20.64■□□□□ 0.9
COL4A3BP-204ENST00000405807 CDC42BPBQ9Y5S2 1711 aa20.64■□□□□ 0.89
COL4A3BP-204ENST00000405807 NKTRP30414 1462 aaKnown RBP20.64■□□□□ 0.89
COL4A3BP-204ENST00000405807 HAP1P54257 671 aaPredicted RBP20.63■□□□□ 0.89
COL4A3BP-204ENST00000405807 RNF17Q9BXT8 1623 aaKnown RBP20.63■□□□□ 0.89
COL4A3BP-204ENST00000405807 SECISBP2LQ93073 1101 aaKnown RBP20.63■□□□□ 0.89
COL4A3BP-204ENST00000405807 E9PSI1 815 aa20.62■□□□□ 0.89
COL4A3BP-204ENST00000405807 NPC1L1Q9UHC9 1359 aa20.62■□□□□ 0.89
COL4A3BP-204ENST00000405807 ASXL1Q8IXJ9 1541 aa20.61■□□□□ 0.89
COL4A3BP-204ENST00000405807 SYCP2Q9BX26 1530 aa20.61■□□□□ 0.89
COL4A3BP-204ENST00000405807 TPM2P07951 284 aa20.61■□□□□ 0.89
COL4A3BP-204ENST00000405807 NGEFQ8N5V2 710 aa20.61■□□□□ 0.89
COL4A3BP-204ENST00000405807 TEX2Q8IWB9 1127 aa20.6■□□□□ 0.89
COL4A3BP-204ENST00000405807 CCDC146Q8IYE0 955 aa20.6■□□□□ 0.89
COL4A3BP-204ENST00000405807 TMEM51Q9NW97 253 aa20.6■□□□□ 0.89
COL4A3BP-204ENST00000405807 CGNL1Q0VF96 1302 aa20.6■□□□□ 0.89
COL4A3BP-204ENST00000405807 APAF1O14727 1248 aa20.6■□□□□ 0.89
COL4A3BP-204ENST00000405807 BCAR3O75815 825 aa20.6■□□□□ 0.89
COL4A3BP-204ENST00000405807 SYNMO15061 1565 aa20.6■□□□□ 0.89
COL4A3BP-204ENST00000405807 PDE3AQ14432 1141 aa20.59■□□□□ 0.89
COL4A3BP-204ENST00000405807 BECN1Q14457 450 aa20.59■□□□□ 0.89
COL4A3BP-204ENST00000405807 SMAP1Q8IYB5 467 aaPredicted RBP20.59■□□□□ 0.89
COL4A3BP-204ENST00000405807 MAPK8IP3Q9UPT6 1336 aa20.59■□□□□ 0.89
COL4A3BP-204ENST00000405807 VGLL3A8MV65 326 aa20.59■□□□□ 0.89
COL4A3BP-204ENST00000405807 SPINK5Q9NQ38 1064 aaPredicted RBP20.59■□□□□ 0.89
COL4A3BP-204ENST00000405807 ABCC2Q92887 1545 aa20.58■□□□□ 0.88
COL4A3BP-204ENST00000405807 IGHDP01880 384 aa20.58■□□□□ 0.88
COL4A3BP-204ENST00000405807 PLXNC1O60486 1568 aa20.57■□□□□ 0.88
COL4A3BP-204ENST00000405807 USP19O94966 1318 aa20.57■□□□□ 0.88
COL4A3BP-204ENST00000405807 ARHGAP5Q13017 1502 aa20.57■□□□□ 0.88
COL4A3BP-204ENST00000405807 DUOX2Q9NRD8 1548 aa20.57■□□□□ 0.88
COL4A3BP-204ENST00000405807 NINLQ9Y2I6 1382 aa20.56■□□□□ 0.88
COL4A3BP-204ENST00000405807 SCAF11Q99590 1463 aaKnown RBP20.56■□□□□ 0.88
COL4A3BP-204ENST00000405807 L1TD1Q5T7N2 865 aaKnown RBP20.54■□□□□ 0.88
COL4A3BP-204ENST00000405807 HOMEZQ8IX15 550 aa20.54■□□□□ 0.88
COL4A3BP-204ENST00000405807 IQGAP1P46940 1657 aa20.54■□□□□ 0.88
COL4A3BP-204ENST00000405807 ERCC6Q03468 1493 aa20.54■□□□□ 0.88
COL4A3BP-204ENST00000405807 CLUAP1Q96AJ1 413 aa20.54■□□□□ 0.88
COL4A3BP-204ENST00000405807 CHRM1P11229 460 aaPredicted RBP20.53■□□□□ 0.88
COL4A3BP-204ENST00000405807 TULP1O00294 542 aaPredicted RBP20.53■□□□□ 0.88
COL4A3BP-204ENST00000405807 SCAPERQ9BY12 1400 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms