RNA–Protein interactions for RNA: ENST00000405010.7

HDAC9-202, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 4,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-202ENST00000405010 DAPK1P53355 1430 aa9.17□□□□□ -0.94
HDAC9-202ENST00000405010 ST18O60284 1047 aa9.16□□□□□ -0.94
HDAC9-202ENST00000405010 ZSCAN30Q86W11 494 aa9.16□□□□□ -0.94
HDAC9-202ENST00000405010 ROCK1Q13464 1354 aa9.16□□□□□ -0.94
HDAC9-202ENST00000405010 MCCP23508 829 aa9.16□□□□□ -0.94
HDAC9-202ENST00000405010 CAVIN1Q6NZI2 390 aaKnown RBP9.16□□□□□ -0.94
HDAC9-202ENST00000405010 PLEKHH2Q8IVE3 1493 aa9.15□□□□□ -0.94
HDAC9-202ENST00000405010 IGHDP01880 384 aa9.15□□□□□ -0.94
HDAC9-202ENST00000405010 NUCB2P80303 420 aa9.15□□□□□ -0.94
HDAC9-202ENST00000405010 RUNDC1Q96C34 613 aa9.15□□□□□ -0.95
HDAC9-202ENST00000405010 DRC7Q8IY82 874 aa9.14□□□□□ -0.95
HDAC9-202ENST00000405010 TBC1D32Q96NH3 1257 aa9.14□□□□□ -0.95
HDAC9-202ENST00000405010 NINLQ9Y2I6 1382 aa9.14□□□□□ -0.95
HDAC9-202ENST00000405010 GAPVD1Q14C86 1478 aa9.14□□□□□ -0.95
HDAC9-202ENST00000405010 PHF14O94880 888 aa9.14□□□□□ -0.95
HDAC9-202ENST00000405010 CIZ1Q9ULV3 898 aaPredicted RBP9.14□□□□□ -0.95
HDAC9-202ENST00000405010 PEG3Q9GZU2 1588 aa9.14□□□□□ -0.95
HDAC9-202ENST00000405010 LRPPRCP42704 1394 aaKnown RBP9.14□□□□□ -0.95
HDAC9-202ENST00000405010 NOL8Q76FK4 1167 aaKnown RBP9.13□□□□□ -0.95
HDAC9-202ENST00000405010 TCP11L2Q8N4U5 519 aa9.13□□□□□ -0.95
HDAC9-202ENST00000405010 RNF214Q8ND24 703 aa9.13□□□□□ -0.95
HDAC9-202ENST00000405010 UQCRHLA0A096LP55 91 aa9.13□□□□□ -0.95
HDAC9-202ENST00000405010 UQCRHP07919 91 aa9.13□□□□□ -0.95
HDAC9-202ENST00000405010 RSPH4AQ5TD94 716 aa9.13□□□□□ -0.95
HDAC9-202ENST00000405010 FOXD4L6Q3SYB3 417 aaPredicted RBP9.13□□□□□ -0.95
HDAC9-202ENST00000405010 FOXD4L3Q6VB84 417 aaPredicted RBP9.13□□□□□ -0.95
HDAC9-202ENST00000405010 CCDC39Q9UFE4 941 aa9.12□□□□□ -0.95
HDAC9-202ENST00000405010 GOLGA6L4A6NEF3 574 aa9.12□□□□□ -0.95
HDAC9-202ENST00000405010 SEC24BO95487 1268 aa9.12□□□□□ -0.95
HDAC9-202ENST00000405010 SAFB2Q14151 953 aaKnown RBP eCLIP9.12□□□□□ -0.95
HDAC9-202ENST00000405010 KDM2BQ8NHM5 1336 aa9.12□□□□□ -0.95
HDAC9-202ENST00000405010 STAG3Q9UJ98 1225 aa9.11□□□□□ -0.95
HDAC9-202ENST00000405010 ERBINQ96RT1 1412 aa9.11□□□□□ -0.95
HDAC9-202ENST00000405010 NKTRP30414 1462 aaKnown RBP9.11□□□□□ -0.95
HDAC9-202ENST00000405010 ABCC5O15440 1437 aa9.1□□□□□ -0.95
HDAC9-202ENST00000405010 CARMIL2Q6F5E8 1435 aa9.1□□□□□ -0.95
HDAC9-202ENST00000405010 SRPK2P78362 688 aaKnown RBP9.1□□□□□ -0.95
HDAC9-202ENST00000405010 TNPO1Q92973 898 aaKnown RBP9.1□□□□□ -0.95
HDAC9-202ENST00000405010 PARD3Q8TEW0 1356 aa9.1□□□□□ -0.95
HDAC9-202ENST00000405010 K7ELQ4 463 aaPredicted RBP9.1□□□□□ -0.95
HDAC9-202ENST00000405010 MVPQ14764 893 aaKnown RBP9.1□□□□□ -0.95
HDAC9-202ENST00000405010 CFAP43Q8NDM7 1665 aa9.1□□□□□ -0.95
HDAC9-202ENST00000405010 GOLGA6L6A8MZA4 724 aa9.1□□□□□ -0.95
HDAC9-202ENST00000405010 PRPF40AO75400 957 aaKnown RBP9.1□□□□□ -0.95
HDAC9-202ENST00000405010 ZNF771Q7L3S4 317 aaPredicted RBP9.1□□□□□ -0.95
HDAC9-202ENST00000405010 CC2D2AQ9P2K1 1620 aa9.09□□□□□ -0.95
HDAC9-202ENST00000405010 ELL2O00472 640 aaPredicted RBP9.09□□□□□ -0.95
HDAC9-202ENST00000405010 WWC1Q8IX03 1113 aa9.09□□□□□ -0.95
HDAC9-202ENST00000405010 KANK1Q14678 1352 aa9.09□□□□□ -0.95
HDAC9-202ENST00000405010 CDK13Q14004 1512 aaKnown RBP9.09□□□□□ -0.95
HDAC9-202ENST00000405010 ZRSR1Q15695 479 aaKnown RBP9.09□□□□□ -0.95
HDAC9-202ENST00000405010 EPRSP07814 1512 aaKnown RBP9.09□□□□□ -0.96
HDAC9-202ENST00000405010 TRAK1Q9UPV9 953 aa9.08□□□□□ -0.96
HDAC9-202ENST00000405010 KIF16BQ96L93 1317 aa9.08□□□□□ -0.96
HDAC9-202ENST00000405010 XPCQ01831 940 aaPredicted RBP9.08□□□□□ -0.96
HDAC9-202ENST00000405010 PDS5BQ9NTI5 1447 aa9.08□□□□□ -0.96
HDAC9-202ENST00000405010 CDC45O75419 566 aa9.08□□□□□ -0.96
HDAC9-202ENST00000405010 RARSP54136 660 aaKnown RBP9.08□□□□□ -0.96
HDAC9-202ENST00000405010 PRDM10Q9NQV6 1147 aa9.07□□□□□ -0.96
HDAC9-202ENST00000405010 REC8O95072 547 aa9.07□□□□□ -0.96
HDAC9-202ENST00000405010 HMGN5P82970 282 aaKnown RBP9.07□□□□□ -0.96
HDAC9-202ENST00000405010 HECW1Q76N89 1606 aa9.07□□□□□ -0.96
HDAC9-202ENST00000405010 HAP1P54257 671 aaPredicted RBP9.07□□□□□ -0.96
HDAC9-202ENST00000405010 EXOSC9Q06265 439 aaKnown RBP9.07□□□□□ -0.96
HDAC9-202ENST00000405010 SPATA31E1Q6ZUB1 1445 aa9.07□□□□□ -0.96
HDAC9-202ENST00000405010 MTHFSP49914 203 aa9.07□□□□□ -0.96
HDAC9-202ENST00000405010 MBD3O95983 291 aa9.06□□□□□ -0.96
HDAC9-202ENST00000405010 KCNJ4P48050 445 aa9.06□□□□□ -0.96
HDAC9-202ENST00000405010 MPNDQ8N594 471 aa9.06□□□□□ -0.96
HDAC9-202ENST00000405010 TSR2Q969E8 191 aaKnown RBP9.06□□□□□ -0.96
HDAC9-202ENST00000405010 POLA1P09884 1462 aaPredicted RBP9.06□□□□□ -0.96
HDAC9-202ENST00000405010 NRDCO43847 1150 aa9.06□□□□□ -0.96
HDAC9-202ENST00000405010 RABEP1Q15276 862 aa9.06□□□□□ -0.96
HDAC9-202ENST00000405010 DNAJC5BQ9UF47 199 aa9.06□□□□□ -0.96
HDAC9-202ENST00000405010 PCDHB15Q9Y5E8 787 aa9.06□□□□□ -0.96
HDAC9-202ENST00000405010 PLEKHH1Q9ULM0 1364 aa9.06□□□□□ -0.96
HDAC9-202ENST00000405010 TRIM6-TRIM34B2RNG4 842 aa9.06□□□□□ -0.96
HDAC9-202ENST00000405010 SSFA2P28290 1259 aa9.06□□□□□ -0.96
HDAC9-202ENST00000405010 WDR63Q8IWG1 891 aa9.06□□□□□ -0.96
HDAC9-202ENST00000405010 PRDM2Q13029 1718 aa9.06□□□□□ -0.96
HDAC9-202ENST00000405010 RALGAPBQ86X10 1494 aa9.05□□□□□ -0.96
HDAC9-202ENST00000405010 INTS3Q68E01 1043 aaKnown RBP9.05□□□□□ -0.96
HDAC9-202ENST00000405010 HMGXB3Q12766 1538 aa9.05□□□□□ -0.96
HDAC9-202ENST00000405010 C9orf84Q5VXU9 1444 aa9.05□□□□□ -0.96
HDAC9-202ENST00000405010 HMMRO75330 724 aa9.05□□□□□ -0.96
HDAC9-202ENST00000405010 RIPK4P57078 832 aa9.05□□□□□ -0.96
HDAC9-202ENST00000405010 TEX14Q8IWB6 1497 aa9.05□□□□□ -0.96
HDAC9-202ENST00000405010 ATF7IPQ6VMQ6 1270 aa9.05□□□□□ -0.96
HDAC9-202ENST00000405010 DIAPH3Q9NSV4 1193 aa9.05□□□□□ -0.96
HDAC9-202ENST00000405010 PRG4Q92954 1404 aaPredicted RBP9.05□□□□□ -0.96
HDAC9-202ENST00000405010 UGGT2Q9NYU1 1516 aa9.05□□□□□ -0.96
HDAC9-202ENST00000405010 JPH4Q96JJ6 628 aa9.04□□□□□ -0.96
HDAC9-202ENST00000405010 DISP3Q9P2K9 1392 aa9.04□□□□□ -0.96
HDAC9-202ENST00000405010 PER1O15534 1290 aaPredicted RBP9.04□□□□□ -0.96
HDAC9-202ENST00000405010 CHD1LQ86WJ1 897 aa9.04□□□□□ -0.96
HDAC9-202ENST00000405010 STK26Q9P289 416 aa9.04□□□□□ -0.96
HDAC9-202ENST00000405010 ZHX1Q9UKY1 873 aaPredicted RBP9.04□□□□□ -0.96
HDAC9-202ENST00000405010 TSPY26PQ9H489 355 aa9.04□□□□□ -0.96
HDAC9-202ENST00000405010 EFCAB2Q5VUJ9 269 aa9.04□□□□□ -0.96
HDAC9-202ENST00000405010 NOB1Q9ULX3 412 aaKnown RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms