RNA–Protein interactions for RNA: ENST00000404867.7

SLIT3-202, Transcript of slit guidance ligand 3, humanhuman

TSL 5 BASIC

Gene SLIT3, Length 8,903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-202ENST00000404867 MNS1Q8NEH6 495 aa11.21□□□□□ -0.62
SLIT3-202ENST00000404867 ANKRD18AQ8IVF6 992 aa11.21□□□□□ -0.62
SLIT3-202ENST00000404867 AQRO60306 1485 aaKnown RBP eCLIP11.21□□□□□ -0.62
SLIT3-202ENST00000404867 TSHZ2Q9NRE2 1034 aa11.21□□□□□ -0.62
SLIT3-202ENST00000404867 HDGFL2Q7Z4V5 671 aaPredicted RBP11.2□□□□□ -0.62
SLIT3-202ENST00000404867 SLKQ9H2G2 1235 aaPredicted RBP11.2□□□□□ -0.62
SLIT3-202ENST00000404867 H3BQV1 296 aa11.2□□□□□ -0.62
SLIT3-202ENST00000404867 IFFO2Q5TF58 517 aa11.2□□□□□ -0.62
SLIT3-202ENST00000404867 RAB3GAP2Q9H2M9 1393 aa11.2□□□□□ -0.62
SLIT3-202ENST00000404867 NEFHP12036 1026 aa11.2□□□□□ -0.62
SLIT3-202ENST00000404867 RRBP1Q9P2E9 1410 aaKnown RBP11.2□□□□□ -0.62
SLIT3-202ENST00000404867 RASSF8Q8NHQ8 419 aa11.2□□□□□ -0.62
SLIT3-202ENST00000404867 SYNJ2O15056 1496 aa11.2□□□□□ -0.62
SLIT3-202ENST00000404867 TERF2IPQ9NYB0 399 aa11.2□□□□□ -0.62
SLIT3-202ENST00000404867 ITPRIPQ8IWB1 547 aa11.2□□□□□ -0.62
SLIT3-202ENST00000404867 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.2□□□□□ -0.62
SLIT3-202ENST00000404867 ERLIN1O75477 346 aa11.19□□□□□ -0.62
SLIT3-202ENST00000404867 GZF1Q9H116 711 aaPredicted RBP11.19□□□□□ -0.62
SLIT3-202ENST00000404867 PDCP20941 246 aa11.19□□□□□ -0.62
SLIT3-202ENST00000404867 KIAA0754O94854 1291 aa11.19□□□□□ -0.62
SLIT3-202ENST00000404867 ZKSCAN1P17029 563 aaPredicted RBP11.19□□□□□ -0.62
SLIT3-202ENST00000404867 ERLIN2O94905 339 aa11.19□□□□□ -0.62
SLIT3-202ENST00000404867 C14orf37Q86TY3 774 aa11.18□□□□□ -0.62
SLIT3-202ENST00000404867 GOLGA6L10A6NI86 522 aa11.18□□□□□ -0.62
SLIT3-202ENST00000404867 MCM3P25205 808 aa11.18□□□□□ -0.62
SLIT3-202ENST00000404867 NUP155O75694 1391 aa11.18□□□□□ -0.62
SLIT3-202ENST00000404867 NPHP1O15259 732 aa11.18□□□□□ -0.62
SLIT3-202ENST00000404867 TMX4Q9H1E5 349 aaPredicted RBP11.18□□□□□ -0.62
SLIT3-202ENST00000404867 MYBBP1AQ9BQG0 1328 aaKnown RBP11.17□□□□□ -0.62
SLIT3-202ENST00000404867 KCNH8Q96L42 1107 aa11.17□□□□□ -0.62
SLIT3-202ENST00000404867 HOMER1Q86YM7 354 aa11.17□□□□□ -0.62
SLIT3-202ENST00000404867 E9PSI1 815 aa11.17□□□□□ -0.62
SLIT3-202ENST00000404867 AMER1Q5JTC6 1135 aaPredicted RBP11.17□□□□□ -0.62
SLIT3-202ENST00000404867 FAM184AQ8NB25 1140 aa11.17□□□□□ -0.62
SLIT3-202ENST00000404867 DDX11Q96FC9 970 aa11.16□□□□□ -0.62
SLIT3-202ENST00000404867 TIAM1Q13009 1591 aa11.16□□□□□ -0.62
SLIT3-202ENST00000404867 IQGAP2Q13576 1575 aa11.16□□□□□ -0.62
SLIT3-202ENST00000404867 NASPP49321 788 aaPredicted RBP11.16□□□□□ -0.62
SLIT3-202ENST00000404867 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.16□□□□□ -0.62
SLIT3-202ENST00000404867 AKAP17AQ02040 695 aaKnown RBP11.15□□□□□ -0.62
SLIT3-202ENST00000404867 HMGB1P09429 215 aaKnown RBP11.15□□□□□ -0.62
SLIT3-202ENST00000404867 SMARCE1Q969G3 411 aa11.15□□□□□ -0.62
SLIT3-202ENST00000404867 DDX19BQ9UMR2 479 aa11.15□□□□□ -0.62
SLIT3-202ENST00000404867 LRRC9Q6ZRR7 1453 aa11.15□□□□□ -0.63
SLIT3-202ENST00000404867 KIF14Q15058 1648 aa11.14□□□□□ -0.63
SLIT3-202ENST00000404867 CNTLNQ9NXG0 1405 aa11.14□□□□□ -0.63
SLIT3-202ENST00000404867 FEZ1Q99689 392 aa11.14□□□□□ -0.63
SLIT3-202ENST00000404867 U2SURPO15042 1029 aaKnown RBP11.14□□□□□ -0.63
SLIT3-202ENST00000404867 TRIM29Q14134 588 aa11.14□□□□□ -0.63
SLIT3-202ENST00000404867 SASS6Q6UVJ0 657 aa11.14□□□□□ -0.63
SLIT3-202ENST00000404867 FAM13BQ9NYF5 915 aa11.14□□□□□ -0.63
SLIT3-202ENST00000404867 FGD6Q6ZV73 1430 aa11.14□□□□□ -0.63
SLIT3-202ENST00000404867 GOLGA6L10A0A0M3HER8 536 aa11.14□□□□□ -0.63
SLIT3-202ENST00000404867 HMGB2P26583 209 aaKnown RBP11.14□□□□□ -0.63
SLIT3-202ENST00000404867 DAPK1P53355 1430 aa11.14□□□□□ -0.63
SLIT3-202ENST00000404867 HMGB1P1B2RPK0 211 aaPredicted RBP11.13□□□□□ -0.63
SLIT3-202ENST00000404867 MFAP1P55081 439 aaKnown RBP11.13□□□□□ -0.63
SLIT3-202ENST00000404867 SYNE3Q6ZMZ3 975 aa11.13□□□□□ -0.63
SLIT3-202ENST00000404867 DYDC1Q8WWB3 177 aa11.13□□□□□ -0.63
SLIT3-202ENST00000404867 SYNJ1O43426 1573 aa11.13□□□□□ -0.63
SLIT3-202ENST00000404867 SMC4Q9NTJ3 1288 aa11.13□□□□□ -0.63
SLIT3-202ENST00000404867 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.13□□□□□ -0.63
SLIT3-202ENST00000404867 HFM1A2PYH4 1435 aa11.13□□□□□ -0.63
SLIT3-202ENST00000404867 CCDC73Q6ZRK6 1079 aa11.12□□□□□ -0.63
SLIT3-202ENST00000404867 EZRP15311 586 aaKnown RBP11.12□□□□□ -0.63
SLIT3-202ENST00000404867 MAGI1Q96QZ7 1491 aaPredicted RBP11.12□□□□□ -0.63
SLIT3-202ENST00000404867 PTPRGP23470 1445 aa11.12□□□□□ -0.63
SLIT3-202ENST00000404867 TRIM6-TRIM34B2RNG4 842 aa11.12□□□□□ -0.63
SLIT3-202ENST00000404867 GBP3Q9H0R5 595 aa11.12□□□□□ -0.63
SLIT3-202ENST00000404867 PDE4AP27815 886 aa11.12□□□□□ -0.63
SLIT3-202ENST00000404867 HSP90AB4PQ58FF6 505 aa11.12□□□□□ -0.63
SLIT3-202ENST00000404867 AEBP2Q6ZN18 517 aaPredicted RBP11.12□□□□□ -0.63
SLIT3-202ENST00000404867 AMOTL1Q8IY63 956 aa11.12□□□□□ -0.63
SLIT3-202ENST00000404867 CCAR2Q8N163 923 aaKnown RBP11.11□□□□□ -0.63
SLIT3-202ENST00000404867 OLFM4Q6UX06 510 aa11.11□□□□□ -0.63
SLIT3-202ENST00000404867 WASHC2AQ641Q2 1341 aa11.11□□□□□ -0.63
SLIT3-202ENST00000404867 WASHC2CQ9Y4E1 1318 aa11.11□□□□□ -0.63
SLIT3-202ENST00000404867 GORABQ5T7V8 394 aa11.11□□□□□ -0.63
SLIT3-202ENST00000404867 CCDC141Q6ZP82 1450 aa11.11□□□□□ -0.63
SLIT3-202ENST00000404867 FHOD3Q2V2M9 1422 aa11.11□□□□□ -0.63
SLIT3-202ENST00000404867 NF2P35240 595 aa11.11□□□□□ -0.63
SLIT3-202ENST00000404867 CALCOCO1Q9P1Z2 691 aa11.11□□□□□ -0.63
SLIT3-202ENST00000404867 CCDC7Q96M83 1385 aa11.1□□□□□ -0.63
SLIT3-202ENST00000404867 EID1Q9Y6B2 187 aa11.1□□□□□ -0.63
SLIT3-202ENST00000404867 DCAF11Q8TEB1 546 aa11.1□□□□□ -0.63
SLIT3-202ENST00000404867 TPRNQ4KMQ1 711 aa11.1□□□□□ -0.63
SLIT3-202ENST00000404867 INTS3Q68E01 1043 aaKnown RBP11.1□□□□□ -0.63
SLIT3-202ENST00000404867 IFT57Q9NWB7 429 aa11.1□□□□□ -0.63
SLIT3-202ENST00000404867 GBP2P32456 591 aaPredicted RBP11.1□□□□□ -0.63
SLIT3-202ENST00000404867 ABCA10Q8WWZ4 1543 aa11.09□□□□□ -0.63
SLIT3-202ENST00000404867 MPHOSPH9Q99550 1183 aa11.09□□□□□ -0.63
SLIT3-202ENST00000404867 CWC22Q9HCG8 908 aaKnown RBP11.09□□□□□ -0.63
SLIT3-202ENST00000404867 CIZ1Q9ULV3 898 aaPredicted RBP11.09□□□□□ -0.63
SLIT3-202ENST00000404867 MCM5P33992 734 aa11.09□□□□□ -0.63
SLIT3-202ENST00000404867 TUBB4BP68371 445 aa11.09□□□□□ -0.63
SLIT3-202ENST00000404867 NEUROD2Q15784 382 aa11.09□□□□□ -0.63
SLIT3-202ENST00000404867 SAFBQ15424 915 aaKnown RBP eCLIP11.09□□□□□ -0.63
SLIT3-202ENST00000404867 NESP48681 1621 aa11.09□□□□□ -0.63
SLIT3-202ENST00000404867 CC2D1BQ5T0F9 858 aaKnown RBP11.08□□□□□ -0.64
SLIT3-202ENST00000404867 BRMS1Q9HCU9 246 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms