RNA–Protein interactions for RNA: ENST00000404744.1

CDPF1-204, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 3 BASIC

Gene CDPF1, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-204ENST00000404744 EID1Q9Y6B2 187 aa22.62■■□□□ 1.21
CDPF1-204ENST00000404744 MYO5BQ9ULV0 1848 aa22.62■■□□□ 1.21
CDPF1-204ENST00000404744 TMEM2Q9UHN6 1383 aa22.61■■□□□ 1.21
CDPF1-204ENST00000404744 VGFO15240 615 aaPredicted RBP22.61■■□□□ 1.21
CDPF1-204ENST00000404744 PPP1R15AO75807 674 aaPredicted RBP22.61■■□□□ 1.21
CDPF1-204ENST00000404744 ZEB1P37275 1124 aaPredicted RBP22.61■■□□□ 1.21
CDPF1-204ENST00000404744 RIMS2Q9UQ26 1411 aa22.61■■□□□ 1.21
CDPF1-204ENST00000404744 NUTM2DQ5VT03 806 aaPredicted RBP22.6■■□□□ 1.21
CDPF1-204ENST00000404744 LMTK3Q96Q04 1460 aa22.58■■□□□ 1.21
CDPF1-204ENST00000404744 TXNDC2Q86VQ3 553 aa22.58■■□□□ 1.21
CDPF1-204ENST00000404744 ANKLE2Q86XL3 938 aa22.57■■□□□ 1.2
CDPF1-204ENST00000404744 SLIT1O75093 1534 aa22.56■■□□□ 1.2
CDPF1-204ENST00000404744 NEXMIFQ5QGS0 1516 aa22.56■■□□□ 1.2
CDPF1-204ENST00000404744 HSPA2P54652 639 aa22.55■■□□□ 1.2
CDPF1-204ENST00000404744 BCANQ96GW7 911 aa22.55■■□□□ 1.2
CDPF1-204ENST00000404744 ARHGAP23Q9P227 1491 aa22.54■■□□□ 1.2
CDPF1-204ENST00000404744 ZFYVE9O95405 1425 aa22.54■■□□□ 1.2
CDPF1-204ENST00000404744 PPLO60437 1756 aa22.53■■□□□ 1.2
CDPF1-204ENST00000404744 LTKP29376 864 aa22.52■■□□□ 1.2
CDPF1-204ENST00000404744 ADGRF5Q8IZF2 1346 aa22.52■■□□□ 1.2
CDPF1-204ENST00000404744 IFT172Q9UG01 1749 aa22.51■■□□□ 1.19
CDPF1-204ENST00000404744 MYOM2P54296 1465 aa22.51■■□□□ 1.19
CDPF1-204ENST00000404744 SCAF11Q99590 1463 aaKnown RBP22.5■■□□□ 1.19
CDPF1-204ENST00000404744 SENP3Q9H4L4 574 aaPredicted RBP22.49■■□□□ 1.19
CDPF1-204ENST00000404744 NCKAP5LQ9HCH0 1330 aa22.48■■□□□ 1.19
CDPF1-204ENST00000404744 ILDR1Q86SU0 546 aaPredicted RBP22.47■■□□□ 1.19
CDPF1-204ENST00000404744 PLEKHG1Q9ULL1 1385 aa22.46■■□□□ 1.19
CDPF1-204ENST00000404744 PRAG1Q86YV5 1406 aa22.45■■□□□ 1.18
CDPF1-204ENST00000404744 NRXN1Q9ULB1 1477 aa22.43■■□□□ 1.18
CDPF1-204ENST00000404744 NBPF8Q3BBV2 869 aa22.43■■□□□ 1.18
CDPF1-204ENST00000404744 PIK3C2GO75747 1445 aa22.43■■□□□ 1.18
CDPF1-204ENST00000404744 POLR1AO95602 1720 aaPredicted RBP22.41■■□□□ 1.18
CDPF1-204ENST00000404744 NPHP4O75161 1426 aaPredicted RBP22.41■■□□□ 1.18
CDPF1-204ENST00000404744 CFAP70Q5T0N1 1121 aa22.41■■□□□ 1.18
CDPF1-204ENST00000404744 C14orf93Q9H972 538 aaKnown RBP22.41■■□□□ 1.18
CDPF1-204ENST00000404744 MED14O60244 1454 aa22.38■■□□□ 1.17
CDPF1-204ENST00000404744 SLC26A8Q96RN1 970 aa22.38■■□□□ 1.17
CDPF1-204ENST00000404744 SETBP1Q9Y6X0 1596 aa22.38■■□□□ 1.17
CDPF1-204ENST00000404744 DMRT2Q9Y5R5 561 aa22.36■■□□□ 1.17
CDPF1-204ENST00000404744 ROCK2O75116 1388 aaKnown RBP22.36■■□□□ 1.17
CDPF1-204ENST00000404744 TBX22Q9Y458 520 aa22.36■■□□□ 1.17
CDPF1-204ENST00000404744 ALKQ9UM73 1620 aa22.35■■□□□ 1.17
CDPF1-204ENST00000404744 IQGAP1P46940 1657 aa22.34■■□□□ 1.17
CDPF1-204ENST00000404744 LAMC1P11047 1609 aa22.34■■□□□ 1.17
CDPF1-204ENST00000404744 ADAMTS13Q76LX8 1427 aa22.34■■□□□ 1.17
CDPF1-204ENST00000404744 NBPF1Q3BBV0 1214 aa22.33■■□□□ 1.17
CDPF1-204ENST00000404744 KIAA1210Q9ULL0 1709 aa22.33■■□□□ 1.16
CDPF1-204ENST00000404744 TRPM1Q7Z4N2 1603 aa22.32■■□□□ 1.16
CDPF1-204ENST00000404744 CARD11Q9BXL7 1154 aa22.32■■□□□ 1.16
CDPF1-204ENST00000404744 STRCQ7RTU9 1775 aa22.32■■□□□ 1.16
CDPF1-204ENST00000404744 RALGAPBQ86X10 1494 aa22.32■■□□□ 1.16
CDPF1-204ENST00000404744 NRXN3Q9Y4C0 1643 aa22.32■■□□□ 1.16
CDPF1-204ENST00000404744 DIP2AQ14689 1571 aa22.31■■□□□ 1.16
CDPF1-204ENST00000404744 TMEM132EQ6IEE7 984 aa22.31■■□□□ 1.16
CDPF1-204ENST00000404744 METP08581 1390 aa22.27■■□□□ 1.16
CDPF1-204ENST00000404744 STK26Q9P289 416 aa22.27■■□□□ 1.16
CDPF1-204ENST00000404744 PIK3R4Q99570 1358 aa22.27■■□□□ 1.15
CDPF1-204ENST00000404744 GPRASP1Q5JY77 1395 aa22.25■■□□□ 1.15
CDPF1-204ENST00000404744 TRAK1Q9UPV9 953 aa22.24■■□□□ 1.15
CDPF1-204ENST00000404744 SETD1AO15047 1707 aaKnown RBP22.23■■□□□ 1.15
CDPF1-204ENST00000404744 ADGRB1O14514 1584 aa22.23■■□□□ 1.15
CDPF1-204ENST00000404744 YTHDC2Q9H6S0 1430 aaKnown RBP22.23■■□□□ 1.15
CDPF1-204ENST00000404744 AMOTL2Q9Y2J4 779 aa22.23■■□□□ 1.15
CDPF1-204ENST00000404744 LRPPRCP42704 1394 aaKnown RBP22.22■■□□□ 1.15
CDPF1-204ENST00000404744 ASXL1Q8IXJ9 1541 aa22.21■■□□□ 1.15
CDPF1-204ENST00000404744 KCNA6P17658 529 aa22.21■■□□□ 1.15
CDPF1-204ENST00000404744 EIF3AQ14152 1382 aaKnown RBP22.2■■□□□ 1.14
CDPF1-204ENST00000404744 EIF4G2P78344 907 aaKnown RBP eCLIP22.19■■□□□ 1.14
CDPF1-204ENST00000404744 ABCC11Q96J66 1382 aa22.19■■□□□ 1.14
CDPF1-204ENST00000404744 FBXO41Q8TF61 875 aa22.18■■□□□ 1.14
CDPF1-204ENST00000404744 PTPRUQ92729 1446 aa22.18■■□□□ 1.14
CDPF1-204ENST00000404744 USP47Q96K76 1375 aa22.17■■□□□ 1.14
CDPF1-204ENST00000404744 POGKQ9P215 609 aa22.17■■□□□ 1.14
CDPF1-204ENST00000404744 CHD2O14647 1828 aaKnown RBP22.15■■□□□ 1.14
CDPF1-204ENST00000404744 SIRT1Q96EB6 747 aa22.15■■□□□ 1.14
CDPF1-204ENST00000404744 PRAM1Q96QH2 718 aa22.13■■□□□ 1.13
CDPF1-204ENST00000404744 TECPR2O15040 1411 aa22.13■■□□□ 1.13
CDPF1-204ENST00000404744 ZNF335Q9H4Z2 1342 aaPredicted RBP22.12■■□□□ 1.13
CDPF1-204ENST00000404744 HSPA5P11021 654 aaKnown RBP22.12■■□□□ 1.13
CDPF1-204ENST00000404744 DLC1Q96QB1 1528 aa22.12■■□□□ 1.13
CDPF1-204ENST00000404744 CENPJQ9HC77 1338 aaPredicted RBP22.12■■□□□ 1.13
CDPF1-204ENST00000404744 ST20-MTHFSA0A0A6YYL1 179 aa22.11■■□□□ 1.13
CDPF1-204ENST00000404744 PROSER2Q86WR7 435 aaPredicted RBP22.11■■□□□ 1.13
CDPF1-204ENST00000404744 KNDC1Q76NI1 1749 aa22.11■■□□□ 1.13
CDPF1-204ENST00000404744 SAFB2Q14151 953 aaKnown RBP eCLIP22.11■■□□□ 1.13
CDPF1-204ENST00000404744 WAPLQ7Z5K2 1190 aa22.11■■□□□ 1.13
CDPF1-204ENST00000404744 ROBO2Q9HCK4 1378 aa22.1■■□□□ 1.13
CDPF1-204ENST00000404744 XRN1Q8IZH2 1706 aaKnown RBP22.1■■□□□ 1.13
CDPF1-204ENST00000404744 NWD1Q149M9 1564 aa22.1■■□□□ 1.13
CDPF1-204ENST00000404744 PTCH1Q13635 1447 aa22.1■■□□□ 1.13
CDPF1-204ENST00000404744 FAM135BQ49AJ0 1406 aa22.1■■□□□ 1.13
CDPF1-204ENST00000404744 CPS1P31327 1500 aa22.1■■□□□ 1.13
CDPF1-204ENST00000404744 NKTRP30414 1462 aaKnown RBP22.08■■□□□ 1.12
CDPF1-204ENST00000404744 ARHGEF28Q8N1W1 1705 aaKnown RBP22.07■■□□□ 1.12
CDPF1-204ENST00000404744 SLC24A1O60721 1099 aa22.07■■□□□ 1.12
CDPF1-204ENST00000404744 CERKQ8TCT0 537 aa22.07■■□□□ 1.12
CDPF1-204ENST00000404744 HIRIP3Q9BW71 556 aaPredicted RBP22.07■■□□□ 1.12
CDPF1-204ENST00000404744 C14orf37Q86TY3 774 aa22.06■■□□□ 1.12
CDPF1-204ENST00000404744 PLEKHH1Q9ULM0 1364 aa22.05■■□□□ 1.12
CDPF1-204ENST00000404744 MINK1Q8N4C8 1332 aaPredicted RBP22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms