RNA–Protein interactions for RNA: ENST00000402697.5

PRAME-203, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-203ENST00000402697 RAPGEF3O95398 923 aa17.56■□□□□ 0.4
PRAME-203ENST00000402697 TMF1P82094 1093 aa17.56■□□□□ 0.4
PRAME-203ENST00000402697 RBM19Q9Y4C8 960 aaKnown RBP17.56■□□□□ 0.4
PRAME-203ENST00000402697 TESK2Q96S53 571 aa17.55■□□□□ 0.4
PRAME-203ENST00000402697 KIAA1210Q9ULL0 1709 aa17.54■□□□□ 0.4
PRAME-203ENST00000402697 FAM69CQ0P6D2 419 aa17.54■□□□□ 0.4
PRAME-203ENST00000402697 PDE3BQ13370 1112 aa17.54■□□□□ 0.4
PRAME-203ENST00000402697 CDCA8Q53HL2 280 aa17.54■□□□□ 0.4
PRAME-203ENST00000402697 MADDQ8WXG6 1647 aa17.53■□□□□ 0.4
PRAME-203ENST00000402697 PER1O15534 1290 aaPredicted RBP17.53■□□□□ 0.4
PRAME-203ENST00000402697 NBPF1Q3BBV0 1214 aa17.53■□□□□ 0.4
PRAME-203ENST00000402697 IQGAP1P46940 1657 aa17.52■□□□□ 0.39
PRAME-203ENST00000402697 YEATS2Q9ULM3 1422 aa17.5■□□□□ 0.39
PRAME-203ENST00000402697 ABCC3O15438 1527 aa17.49■□□□□ 0.39
PRAME-203ENST00000402697 CAMSAP1Q5T5Y3 1602 aa17.49■□□□□ 0.39
PRAME-203ENST00000402697 UGGT1Q9NYU2 1555 aa17.48■□□□□ 0.39
PRAME-203ENST00000402697 KIF1BO60333 1816 aa17.48■□□□□ 0.39
PRAME-203ENST00000402697 SCAF11Q99590 1463 aaKnown RBP17.48■□□□□ 0.39
PRAME-203ENST00000402697 FANCIQ9NVI1 1328 aa17.48■□□□□ 0.39
PRAME-203ENST00000402697 ZC3H13Q5T200 1668 aaKnown RBP17.47■□□□□ 0.39
PRAME-203ENST00000402697 EIF3AQ14152 1382 aaKnown RBP17.47■□□□□ 0.39
PRAME-203ENST00000402697 IRX6P78412 446 aaPredicted RBP17.47■□□□□ 0.39
PRAME-203ENST00000402697 MROH2AA6NES4 1674 aa17.46■□□□□ 0.39
PRAME-203ENST00000402697 DISP3Q9P2K9 1392 aa17.46■□□□□ 0.39
PRAME-203ENST00000402697 IFT172Q9UG01 1749 aa17.45■□□□□ 0.38
PRAME-203ENST00000402697 CFAP65Q6ZU64 1925 aaKnown RBP17.45■□□□□ 0.38
PRAME-203ENST00000402697 NPATQ14207 1427 aa17.45■□□□□ 0.38
PRAME-203ENST00000402697 MYOM2P54296 1465 aa17.45■□□□□ 0.38
PRAME-203ENST00000402697 ANP32EQ9BTT0 268 aa17.44■□□□□ 0.38
PRAME-203ENST00000402697 SIGLEC1Q9BZZ2 1709 aa17.44■□□□□ 0.38
PRAME-203ENST00000402697 SYNMO15061 1565 aa17.44■□□□□ 0.38
PRAME-203ENST00000402697 NPC1L1Q9UHC9 1359 aa17.44■□□□□ 0.38
PRAME-203ENST00000402697 REREQ9P2R6 1566 aa17.42■□□□□ 0.38
PRAME-203ENST00000402697 PANK3Q9H999 370 aa17.42■□□□□ 0.38
PRAME-203ENST00000402697 BLMP54132 1417 aaPredicted RBP17.42■□□□□ 0.38
PRAME-203ENST00000402697 GGT6Q6P531 493 aa17.41■□□□□ 0.38
PRAME-203ENST00000402697 ADGRB3O60242 1522 aa17.41■□□□□ 0.38
PRAME-203ENST00000402697 PIK3C2BO00750 1634 aa17.39■□□□□ 0.37
PRAME-203ENST00000402697 CNGB1Q14028 1251 aaPredicted RBP17.36■□□□□ 0.37
PRAME-203ENST00000402697 ARHGEF40Q8TER5 1519 aa17.36■□□□□ 0.37
PRAME-203ENST00000402697 NOS1P29475 1434 aa17.36■□□□□ 0.37
PRAME-203ENST00000402697 ARHGAP31Q2M1Z3 1444 aa17.36■□□□□ 0.37
PRAME-203ENST00000402697 B4GALNT3Q6L9W6 998 aa17.36■□□□□ 0.37
PRAME-203ENST00000402697 KNSTRNQ9Y448 316 aa17.36■□□□□ 0.37
PRAME-203ENST00000402697 PPLO60437 1756 aa17.35■□□□□ 0.37
PRAME-203ENST00000402697 AGLP35573 1532 aa17.35■□□□□ 0.37
PRAME-203ENST00000402697 NRXN1Q9ULB1 1477 aa17.35■□□□□ 0.37
PRAME-203ENST00000402697 SBNO2Q9Y2G9 1366 aa17.35■□□□□ 0.37
PRAME-203ENST00000402697 KDM5AP29375 1690 aaKnown RBP17.35■□□□□ 0.37
PRAME-203ENST00000402697 ASXL1Q8IXJ9 1541 aa17.34■□□□□ 0.37
PRAME-203ENST00000402697 CCDC136Q96JN2 1154 aa17.34■□□□□ 0.37
PRAME-203ENST00000402697 PIK3C2GO75747 1445 aa17.33■□□□□ 0.37
PRAME-203ENST00000402697 PREX1Q8TCU6 1659 aa17.33■□□□□ 0.37
PRAME-203ENST00000402697 SETBP1Q9Y6X0 1596 aa17.33■□□□□ 0.36
PRAME-203ENST00000402697 RCAN3Q9UKA8 241 aa17.33■□□□□ 0.36
PRAME-203ENST00000402697 MYO3AQ8NEV4 1616 aa17.32■□□□□ 0.36
PRAME-203ENST00000402697 RRP1P56182 461 aaKnown RBP17.32■□□□□ 0.36
PRAME-203ENST00000402697 CC2D1BQ5T0F9 858 aaKnown RBP17.32■□□□□ 0.36
PRAME-203ENST00000402697 AMER1Q5JTC6 1135 aaPredicted RBP17.3■□□□□ 0.36
PRAME-203ENST00000402697 RPGRIP1LQ68CZ1 1315 aa17.29■□□□□ 0.36
PRAME-203ENST00000402697 MYOM1P52179 1685 aa17.29■□□□□ 0.36
PRAME-203ENST00000402697 NGEFQ8N5V2 710 aa17.29■□□□□ 0.36
PRAME-203ENST00000402697 ADGRF5Q8IZF2 1346 aa17.28■□□□□ 0.36
PRAME-203ENST00000402697 CLTCQ00610 1675 aaKnown RBP17.27■□□□□ 0.36
PRAME-203ENST00000402697 MYO5BQ9ULV0 1848 aa17.27■□□□□ 0.36
PRAME-203ENST00000402697 PPP2R1AP30153 589 aa17.27■□□□□ 0.35
PRAME-203ENST00000402697 WDR43Q15061 677 aaKnown RBP eCLIP17.25■□□□□ 0.358e-17■□□□□ 8.1
PRAME-203ENST00000402697 CFAP70Q5T0N1 1121 aa17.24■□□□□ 0.35
PRAME-203ENST00000402697 NEXMIFQ5QGS0 1516 aa17.24■□□□□ 0.35
PRAME-203ENST00000402697 ERVK-7P63135 1459 aa17.23■□□□□ 0.35
PRAME-203ENST00000402697 PUS7Q96PZ0 661 aaKnown RBP17.23■□□□□ 0.35
PRAME-203ENST00000402697 TMEM131LA2VDJ0 1609 aa17.23■□□□□ 0.35
PRAME-203ENST00000402697 CHGAP10645 457 aaKnown RBP17.22■□□□□ 0.35
PRAME-203ENST00000402697 ADAMTS8Q9UP79 889 aa17.2■□□□□ 0.34
PRAME-203ENST00000402697 PPP6R1Q9UPN7 881 aa17.19■□□□□ 0.34
PRAME-203ENST00000402697 ADGRB1O14514 1584 aa17.19■□□□□ 0.34
PRAME-203ENST00000402697 SPATA31D1Q6ZQQ2 1576 aa17.19■□□□□ 0.34
PRAME-203ENST00000402697 TCERG1O14776 1098 aaKnown RBP17.18■□□□□ 0.34
PRAME-203ENST00000402697 C14orf93Q9H972 538 aaKnown RBP17.18■□□□□ 0.34
PRAME-203ENST00000402697 ZNF521Q96K83 1311 aa17.18■□□□□ 0.34
PRAME-203ENST00000402697 ERICH6Q7L0X2 663 aa17.17■□□□□ 0.34
PRAME-203ENST00000402697 CENPJQ9HC77 1338 aaPredicted RBP17.17■□□□□ 0.34
PRAME-203ENST00000402697 IDI1Q13907 227 aa17.17■□□□□ 0.34
PRAME-203ENST00000402697 SLC52A1Q9NWF4 448 aa17.16■□□□□ 0.34
PRAME-203ENST00000402697 MSH5O43196 834 aa17.16■□□□□ 0.34
PRAME-203ENST00000402697 MS4A1P11836 297 aa17.16■□□□□ 0.34
PRAME-203ENST00000402697 CDCA7LQ96GN5 454 aa17.15■□□□□ 0.34
PRAME-203ENST00000402697 USP32Q8NFA0 1604 aa17.15■□□□□ 0.34
PRAME-203ENST00000402697 GOLGA2Q08379 1002 aa17.14■□□□□ 0.33
PRAME-203ENST00000402697 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.14■□□□□ 0.33
PRAME-203ENST00000402697 POLR3AO14802 1390 aaPredicted RBP17.14■□□□□ 0.33
PRAME-203ENST00000402697 FBXO31Q5XUX0 539 aaPredicted RBP17.14■□□□□ 0.33
PRAME-203ENST00000402697 EXOC6Q8TAG9 804 aa17.14■□□□□ 0.33
PRAME-203ENST00000402697 ZFYVE9O95405 1425 aa17.13■□□□□ 0.33
PRAME-203ENST00000402697 SALL2Q9Y467 1007 aaPredicted RBP17.12■□□□□ 0.33
PRAME-203ENST00000402697 QRICH2Q9H0J4 1663 aa17.11■□□□□ 0.33
PRAME-203ENST00000402697 VGFO15240 615 aaPredicted RBP17.11■□□□□ 0.33
PRAME-203ENST00000402697 ARHGEF28Q8N1W1 1705 aaKnown RBP17.11■□□□□ 0.33
PRAME-203ENST00000402697 NUTM2DQ5VT03 806 aaPredicted RBP17.11■□□□□ 0.33
PRAME-203ENST00000402697 DUSP27Q5VZP5 1158 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms