RNA–Protein interactions for RNA: ENST00000402550.5

CGREF1-204, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 2 BASIC

Gene CGREF1, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-204ENST00000402550 EID1Q9Y6B2 187 aa38.92■■■■□ 3.82
CGREF1-204ENST00000402550 NEUROD1Q13562 356 aa38.91■■■■□ 3.82
CGREF1-204ENST00000402550 HDGFP51858 240 aaKnown RBP38.91■■■■□ 3.82
CGREF1-204ENST00000402550 ZFYVE9O95405 1425 aa38.9■■■■□ 3.82
CGREF1-204ENST00000402550 RIMS2Q9UQ26 1411 aa38.9■■■■□ 3.82
CGREF1-204ENST00000402550 NEURL4Q96JN8 1562 aa38.87■■■■□ 3.81
CGREF1-204ENST00000402550 SCAF11Q99590 1463 aaKnown RBP38.86■■■■□ 3.81
CGREF1-204ENST00000402550 NUTM2DQ5VT03 806 aaPredicted RBP38.86■■■■□ 3.81
CGREF1-204ENST00000402550 ABCF1Q8NE71 845 aaKnown RBP eCLIP38.86■■■■□ 3.81
CGREF1-204ENST00000402550 RPGRIP1LQ68CZ1 1315 aa38.86■■■■□ 3.81
CGREF1-204ENST00000402550 POLR1AO95602 1720 aaPredicted RBP38.83■■■■□ 3.81
CGREF1-204ENST00000402550 NEXMIFQ5QGS0 1516 aa38.8■■■■□ 3.8
CGREF1-204ENST00000402550 MED14O60244 1454 aa38.79■■■■□ 3.8
CGREF1-204ENST00000402550 PPP1R15AO75807 674 aaPredicted RBP38.79■■■■□ 3.8
CGREF1-204ENST00000402550 DMRT2Q9Y5R5 561 aa38.79■■■■□ 3.8
CGREF1-204ENST00000402550 VGFO15240 615 aaPredicted RBP38.76■■■■□ 3.8
CGREF1-204ENST00000402550 NPHP4O75161 1426 aaPredicted RBP38.75■■■■□ 3.79
CGREF1-204ENST00000402550 TONSLQ96HA7 1378 aa38.75■■■■□ 3.79
CGREF1-204ENST00000402550 PPLO60437 1756 aa38.73■■■■□ 3.79
CGREF1-204ENST00000402550 PLEKHG1Q9ULL1 1385 aa38.7■■■■□ 3.79
CGREF1-204ENST00000402550 SENP3Q9H4L4 574 aaPredicted RBP38.7■■■■□ 3.79
CGREF1-204ENST00000402550 TIMELESSQ9UNS1 1208 aa38.69■■■■□ 3.78
CGREF1-204ENST00000402550 IFT172Q9UG01 1749 aa38.68■■■■□ 3.78
CGREF1-204ENST00000402550 DCAF11Q8TEB1 546 aa38.68■■■■□ 3.78
CGREF1-204ENST00000402550 BCANQ96GW7 911 aa38.68■■■■□ 3.78
CGREF1-204ENST00000402550 IQGAP1P46940 1657 aa38.67■■■■□ 3.78
CGREF1-204ENST00000402550 ADGRF5Q8IZF2 1346 aa38.65■■■■□ 3.78
CGREF1-204ENST00000402550 L3MBTL2Q969R5 705 aa38.63■■■■□ 3.77
CGREF1-204ENST00000402550 KDM2AQ9Y2K7 1162 aa38.63■■■■□ 3.77
CGREF1-204ENST00000402550 STAC3Q96MF2 364 aa38.62■■■■□ 3.77
CGREF1-204ENST00000402550 SLC26A8Q96RN1 970 aa38.62■■■■□ 3.77
CGREF1-204ENST00000402550 ZEB1P37275 1124 aaPredicted RBP38.61■■■■□ 3.77
CGREF1-204ENST00000402550 MYOM2P54296 1465 aa38.56■■■■□ 3.76
CGREF1-204ENST00000402550 TBX22Q9Y458 520 aa38.56■■■■□ 3.76
CGREF1-204ENST00000402550 ADAMTS13Q76LX8 1427 aa38.56■■■■□ 3.76
CGREF1-204ENST00000402550 SETBP1Q9Y6X0 1596 aa38.55■■■■□ 3.76
CGREF1-204ENST00000402550 NRXN3Q9Y4C0 1643 aa38.53■■■■□ 3.76
CGREF1-204ENST00000402550 NRXN1Q9ULB1 1477 aa38.52■■■■□ 3.76
CGREF1-204ENST00000402550 PIK3C2GO75747 1445 aa38.5■■■■□ 3.75
CGREF1-204ENST00000402550 DIP2AQ14689 1571 aa38.44■■■■□ 3.74
CGREF1-204ENST00000402550 ALKQ9UM73 1620 aa38.44■■■■□ 3.74
CGREF1-204ENST00000402550 C14orf93Q9H972 538 aaKnown RBP38.44■■■■□ 3.74
CGREF1-204ENST00000402550 ZNF335Q9H4Z2 1342 aaPredicted RBP38.43■■■■□ 3.74
CGREF1-204ENST00000402550 CFAP70Q5T0N1 1121 aa38.41■■■■□ 3.74
CGREF1-204ENST00000402550 METP08581 1390 aa38.4■■■■□ 3.74
CGREF1-204ENST00000402550 PRAG1Q86YV5 1406 aa38.37■■■■□ 3.73
CGREF1-204ENST00000402550 PIK3R4Q99570 1358 aa38.37■■■■□ 3.73
CGREF1-204ENST00000402550 SETD1AO15047 1707 aaKnown RBP38.37■■■■□ 3.73
CGREF1-204ENST00000402550 KCNA6P17658 529 aa38.36■■■■□ 3.73
CGREF1-204ENST00000402550 CHD2O14647 1828 aaKnown RBP38.33■■■■□ 3.73
CGREF1-204ENST00000402550 TMEM132EQ6IEE7 984 aa38.32■■■■□ 3.73
CGREF1-204ENST00000402550 PTPRUQ92729 1446 aa38.3■■■■□ 3.72
CGREF1-204ENST00000402550 NBPF8Q3BBV2 869 aa38.3■■■■□ 3.72
CGREF1-204ENST00000402550 AMOTL2Q9Y2J4 779 aa38.3■■■■□ 3.72
CGREF1-204ENST00000402550 STRCP1A6NGW2 1772 aa38.3■■■■□ 3.72
CGREF1-204ENST00000402550 LAMC1P11047 1609 aa38.29■■■■□ 3.72
CGREF1-204ENST00000402550 LTBP4Q8N2S1 1624 aa38.28■■■■□ 3.72
CGREF1-204ENST00000402550 ASXL1Q8IXJ9 1541 aa38.23■■■■□ 3.71
CGREF1-204ENST00000402550 NWD1Q149M9 1564 aa38.23■■■■□ 3.71
CGREF1-204ENST00000402550 NBPF1Q3BBV0 1214 aa38.23■■■■□ 3.71
CGREF1-204ENST00000402550 KIAA1210Q9ULL0 1709 aa38.22■■■■□ 3.71
CGREF1-204ENST00000402550 CPS1P31327 1500 aa38.19■■■■□ 3.7
CGREF1-204ENST00000402550 ADGRB1O14514 1584 aa38.19■■■■□ 3.7
CGREF1-204ENST00000402550 STK26Q9P289 416 aa38.19■■■■□ 3.7
CGREF1-204ENST00000402550 TRPM1Q7Z4N2 1603 aa38.18■■■■□ 3.7
CGREF1-204ENST00000402550 YTHDC2Q9H6S0 1430 aaKnown RBP38.17■■■■□ 3.7
CGREF1-204ENST00000402550 LRPPRCP42704 1394 aaKnown RBP38.17■■■■□ 3.7
CGREF1-204ENST00000402550 XRN1Q8IZH2 1706 aaKnown RBP38.17■■■■□ 3.7
CGREF1-204ENST00000402550 PROSER2Q86WR7 435 aaPredicted RBP38.16■■■■□ 3.7
CGREF1-204ENST00000402550 NKTRP30414 1462 aaKnown RBP38.15■■■■□ 3.7
CGREF1-204ENST00000402550 ABCC11Q96J66 1382 aa38.15■■■■□ 3.7
CGREF1-204ENST00000402550 RALGAPBQ86X10 1494 aa38.12■■■■□ 3.69
CGREF1-204ENST00000402550 LRRC7Q96NW7 1537 aa38.12■■■■□ 3.69
CGREF1-204ENST00000402550 RBM33Q96EV2 1170 aaKnown RBP38.1■■■■□ 3.69
CGREF1-204ENST00000402550 ROCK2O75116 1388 aaKnown RBP38.09■■■■□ 3.69
CGREF1-204ENST00000402550 ROBO2Q9HCK4 1378 aa38.09■■■■□ 3.69
CGREF1-204ENST00000402550 TECPR2O15040 1411 aa38.08■■■■□ 3.69
CGREF1-204ENST00000402550 CERKQ8TCT0 537 aa38.07■■■■□ 3.69
CGREF1-204ENST00000402550 TRAK1Q9UPV9 953 aa38.07■■■■□ 3.69
CGREF1-204ENST00000402550 TMEM94Q12767 1356 aa38.07■■■■□ 3.68
CGREF1-204ENST00000402550 PTCH1Q13635 1447 aa38.06■■■■□ 3.68
CGREF1-204ENST00000402550 SIRT1Q96EB6 747 aa38.05■■■■□ 3.68
CGREF1-204ENST00000402550 KNDC1Q76NI1 1749 aa38.02■■■■□ 3.68
CGREF1-204ENST00000402550 GPRASP1Q5JY77 1395 aa38.02■■■■□ 3.68
CGREF1-204ENST00000402550 WAPLQ7Z5K2 1190 aa38.02■■■■□ 3.68
CGREF1-204ENST00000402550 XIRP1Q702N8 1843 aaKnown RBP38.01■■■■□ 3.67
CGREF1-204ENST00000402550 CARD11Q9BXL7 1154 aa37.99■■■■□ 3.67
CGREF1-204ENST00000402550 NCOA3Q9Y6Q9 1424 aa37.98■■■■□ 3.67
CGREF1-204ENST00000402550 FAM135BQ49AJ0 1406 aa37.98■■■■□ 3.67
CGREF1-204ENST00000402550 DLC1Q96QB1 1528 aa37.97■■■■□ 3.67
CGREF1-204ENST00000402550 PRAM1Q96QH2 718 aa37.97■■■■□ 3.67
CGREF1-204ENST00000402550 PLEKHH1Q9ULM0 1364 aa37.95■■■■□ 3.67
CGREF1-204ENST00000402550 C14orf37Q86TY3 774 aa37.93■■■■□ 3.66
CGREF1-204ENST00000402550 POGKQ9P215 609 aa37.93■■■■□ 3.66
CGREF1-204ENST00000402550 IQSEC2Q5JU85 1478 aa37.92■■■■□ 3.66
CGREF1-204ENST00000402550 C19orf44Q9H6X5 657 aa37.91■■■■□ 3.66
CGREF1-204ENST00000402550 SAFB2Q14151 953 aaKnown RBP eCLIP37.89■■■■□ 3.66
CGREF1-204ENST00000402550 ARHGEF28Q8N1W1 1705 aaKnown RBP37.89■■■■□ 3.66
CGREF1-204ENST00000402550 MSH6P52701 1360 aa37.86■■■■□ 3.65
CGREF1-204ENST00000402550 ADGRL3Q9HAR2 1447 aa37.85■■■■□ 3.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms