RNA–Protein interactions for RNA: ENST00000402458.1

SNU13-204, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 3 BASIC

Gene SNU13, Length 462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-204ENST00000402458 PPP1R15AO75807 674 aaPredicted RBP19.75■□□□□ 0.75
SNU13-204ENST00000402458 NEUROD1Q13562 356 aa19.75■□□□□ 0.75
SNU13-204ENST00000402458 TXNDC2Q86VQ3 553 aa19.75■□□□□ 0.75
SNU13-204ENST00000402458 SPATA31E1Q6ZUB1 1445 aa19.75■□□□□ 0.75
SNU13-204ENST00000402458 POLR1AO95602 1720 aaPredicted RBP19.74■□□□□ 0.75
SNU13-204ENST00000402458 SIN3AQ96ST3 1273 aa19.74■□□□□ 0.75
SNU13-204ENST00000402458 SCAF11Q99590 1463 aaKnown RBP19.73■□□□□ 0.75
SNU13-204ENST00000402458 NCKAP5LQ9HCH0 1330 aa19.72■□□□□ 0.75
SNU13-204ENST00000402458 ZFYVE9O95405 1425 aa19.71■□□□□ 0.75
SNU13-204ENST00000402458 VGFO15240 615 aaPredicted RBP19.7■□□□□ 0.74
SNU13-204ENST00000402458 LTKP29376 864 aa19.7■□□□□ 0.74
SNU13-204ENST00000402458 DMRT2Q9Y5R5 561 aa19.7■□□□□ 0.74
SNU13-204ENST00000402458 NEXMIFQ5QGS0 1516 aa19.7■□□□□ 0.74
SNU13-204ENST00000402458 PPLO60437 1756 aa19.7■□□□□ 0.74
SNU13-204ENST00000402458 STRCQ7RTU9 1775 aa19.7■□□□□ 0.74
SNU13-204ENST00000402458 NUTM2DQ5VT03 806 aaPredicted RBP19.69■□□□□ 0.74
SNU13-204ENST00000402458 BCANQ96GW7 911 aa19.69■□□□□ 0.74
SNU13-204ENST00000402458 IFT172Q9UG01 1749 aa19.66■□□□□ 0.74
SNU13-204ENST00000402458 STAC3Q96MF2 364 aa19.66■□□□□ 0.74
SNU13-204ENST00000402458 TONSLQ96HA7 1378 aa19.66■□□□□ 0.74
SNU13-204ENST00000402458 NPHP4O75161 1426 aaPredicted RBP19.66■□□□□ 0.74
SNU13-204ENST00000402458 MED14O60244 1454 aa19.66■□□□□ 0.74
SNU13-204ENST00000402458 DCAF11Q8TEB1 546 aa19.65■□□□□ 0.74
SNU13-204ENST00000402458 PLEKHG1Q9ULL1 1385 aa19.65■□□□□ 0.74
SNU13-204ENST00000402458 IQGAP1P46940 1657 aa19.65■□□□□ 0.74
SNU13-204ENST00000402458 KDM2AQ9Y2K7 1162 aa19.63■□□□□ 0.73
SNU13-204ENST00000402458 MYOM2P54296 1465 aa19.61■□□□□ 0.73
SNU13-204ENST00000402458 L3MBTL2Q969R5 705 aa19.6■□□□□ 0.73
SNU13-204ENST00000402458 SENP3Q9H4L4 574 aaPredicted RBP19.6■□□□□ 0.73
SNU13-204ENST00000402458 ADGRF5Q8IZF2 1346 aa19.58■□□□□ 0.73
SNU13-204ENST00000402458 TIMELESSQ9UNS1 1208 aa19.58■□□□□ 0.72
SNU13-204ENST00000402458 SETBP1Q9Y6X0 1596 aa19.57■□□□□ 0.72
SNU13-204ENST00000402458 DIP2AQ14689 1571 aa19.57■□□□□ 0.72
SNU13-204ENST00000402458 SLC26A8Q96RN1 970 aa19.56■□□□□ 0.72
SNU13-204ENST00000402458 TBX22Q9Y458 520 aa19.55■□□□□ 0.72
SNU13-204ENST00000402458 NRXN1Q9ULB1 1477 aa19.54■□□□□ 0.72
SNU13-204ENST00000402458 PIK3C2GO75747 1445 aa19.54■□□□□ 0.72
SNU13-204ENST00000402458 NRXN3Q9Y4C0 1643 aa19.53■□□□□ 0.72
SNU13-204ENST00000402458 ADAMTS13Q76LX8 1427 aa19.52■□□□□ 0.72
SNU13-204ENST00000402458 LAMC1P11047 1609 aa19.52■□□□□ 0.72
SNU13-204ENST00000402458 ALKQ9UM73 1620 aa19.52■□□□□ 0.72
SNU13-204ENST00000402458 PRAG1Q86YV5 1406 aa19.5■□□□□ 0.71
SNU13-204ENST00000402458 PIK3R4Q99570 1358 aa19.49■□□□□ 0.71
SNU13-204ENST00000402458 C14orf93Q9H972 538 aaKnown RBP19.49■□□□□ 0.71
SNU13-204ENST00000402458 CFAP70Q5T0N1 1121 aa19.48■□□□□ 0.71
SNU13-204ENST00000402458 KIAA1210Q9ULL0 1709 aa19.47■□□□□ 0.71
SNU13-204ENST00000402458 SETD1AO15047 1707 aaKnown RBP19.46■□□□□ 0.71
SNU13-204ENST00000402458 KCNA6P17658 529 aa19.45■□□□□ 0.7
SNU13-204ENST00000402458 CHD2O14647 1828 aaKnown RBP19.45■□□□□ 0.7
SNU13-204ENST00000402458 METP08581 1390 aa19.44■□□□□ 0.7
SNU13-204ENST00000402458 ZNF335Q9H4Z2 1342 aaPredicted RBP19.44■□□□□ 0.7
SNU13-204ENST00000402458 TMEM132EQ6IEE7 984 aa19.42■□□□□ 0.7
SNU13-204ENST00000402458 AMOTL2Q9Y2J4 779 aa19.42■□□□□ 0.7
SNU13-204ENST00000402458 TRPM1Q7Z4N2 1603 aa19.41■□□□□ 0.7
SNU13-204ENST00000402458 NWD1Q149M9 1564 aa19.4■□□□□ 0.7
SNU13-204ENST00000402458 NBPF8Q3BBV2 869 aa19.4■□□□□ 0.7
SNU13-204ENST00000402458 CPS1P31327 1500 aa19.4■□□□□ 0.7
SNU13-204ENST00000402458 STK26Q9P289 416 aa19.39■□□□□ 0.69
SNU13-204ENST00000402458 ROCK2O75116 1388 aaKnown RBP19.39■□□□□ 0.69
SNU13-204ENST00000402458 PTPRUQ92729 1446 aa19.39■□□□□ 0.69
SNU13-204ENST00000402458 STRCP1A6NGW2 1772 aa19.38■□□□□ 0.69
SNU13-204ENST00000402458 NKTRP30414 1462 aaKnown RBP19.38■□□□□ 0.69
SNU13-204ENST00000402458 LRPPRCP42704 1394 aaKnown RBP19.38■□□□□ 0.69
SNU13-204ENST00000402458 ASXL1Q8IXJ9 1541 aa19.38■□□□□ 0.69
SNU13-204ENST00000402458 YTHDC2Q9H6S0 1430 aaKnown RBP19.38■□□□□ 0.69
SNU13-204ENST00000402458 XRN1Q8IZH2 1706 aaKnown RBP19.37■□□□□ 0.69
SNU13-204ENST00000402458 ADGRB1O14514 1584 aa19.37■□□□□ 0.69
SNU13-204ENST00000402458 RALGAPBQ86X10 1494 aa19.36■□□□□ 0.69
SNU13-204ENST00000402458 NBPF1Q3BBV0 1214 aa19.36■□□□□ 0.69
SNU13-204ENST00000402458 PROSER2Q86WR7 435 aaPredicted RBP19.36■□□□□ 0.69
SNU13-204ENST00000402458 ABCC11Q96J66 1382 aa19.35■□□□□ 0.69
SNU13-204ENST00000402458 KNDC1Q76NI1 1749 aa19.35■□□□□ 0.69
SNU13-204ENST00000402458 LTBP4Q8N2S1 1624 aa19.34■□□□□ 0.69
SNU13-204ENST00000402458 TRAK1Q9UPV9 953 aa19.34■□□□□ 0.69
SNU13-204ENST00000402458 PTCH1Q13635 1447 aa19.34■□□□□ 0.69
SNU13-204ENST00000402458 CARD11Q9BXL7 1154 aa19.33■□□□□ 0.68
SNU13-204ENST00000402458 TECPR2O15040 1411 aa19.33■□□□□ 0.68
SNU13-204ENST00000402458 ZEB1P37275 1124 aaPredicted RBP19.32■□□□□ 0.68
SNU13-204ENST00000402458 SIRT1Q96EB6 747 aa19.31■□□□□ 0.68
SNU13-204ENST00000402458 POGKQ9P215 609 aa19.31■□□□□ 0.68
SNU13-204ENST00000402458 GPRASP1Q5JY77 1395 aa19.31■□□□□ 0.68
SNU13-204ENST00000402458 LRRC7Q96NW7 1537 aa19.3■□□□□ 0.68
SNU13-204ENST00000402458 DLC1Q96QB1 1528 aa19.3■□□□□ 0.68
SNU13-204ENST00000402458 C14orf37Q86TY3 774 aa19.3■□□□□ 0.68
SNU13-204ENST00000402458 ROBO2Q9HCK4 1378 aa19.3■□□□□ 0.68
SNU13-204ENST00000402458 FAM135BQ49AJ0 1406 aa19.29■□□□□ 0.68
SNU13-204ENST00000402458 TMEM94Q12767 1356 aa19.29■□□□□ 0.68
SNU13-204ENST00000402458 EIF3AQ14152 1382 aaKnown RBP19.29■□□□□ 0.68
SNU13-204ENST00000402458 NCOA3Q9Y6Q9 1424 aa19.28■□□□□ 0.68
SNU13-204ENST00000402458 PRAM1Q96QH2 718 aa19.27■□□□□ 0.68
SNU13-204ENST00000402458 ARHGEF28Q8N1W1 1705 aaKnown RBP19.27■□□□□ 0.68
SNU13-204ENST00000402458 WAPLQ7Z5K2 1190 aa19.26■□□□□ 0.67
SNU13-204ENST00000402458 CERKQ8TCT0 537 aa19.26■□□□□ 0.67
SNU13-204ENST00000402458 RBM33Q96EV2 1170 aaKnown RBP19.26■□□□□ 0.67
SNU13-204ENST00000402458 XIRP1Q702N8 1843 aaKnown RBP19.25■□□□□ 0.67
SNU13-204ENST00000402458 IQSEC2Q5JU85 1478 aa19.24■□□□□ 0.67
SNU13-204ENST00000402458 MSH6P52701 1360 aa19.24■□□□□ 0.67
SNU13-204ENST00000402458 SAFB2Q14151 953 aaKnown RBP eCLIP19.24■□□□□ 0.67
SNU13-204ENST00000402458 CENPJQ9HC77 1338 aaPredicted RBP19.23■□□□□ 0.67
SNU13-204ENST00000402458 PLEKHH1Q9ULM0 1364 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms