RNA–Protein interactions for RNA: ENST00000400353.6

LINC00649-202, long intergenic non-protein coding RNA 649, humanhuman

TSL 3

Gene LINC00649, Length 2,090 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-202ENST00000400353 CDCA8Q53HL2 280 aa14.56□□□□□ -0.08
LINC00649-202ENST00000400353 DISP3Q9P2K9 1392 aa14.55□□□□□ -0.08
LINC00649-202ENST00000400353 PPRC1Q5VV67 1664 aaKnown RBP14.55□□□□□ -0.08
LINC00649-202ENST00000400353 PNISRQ8TF01 805 aaKnown RBP14.55□□□□□ -0.08
LINC00649-202ENST00000400353 LRPPRCP42704 1394 aaKnown RBP14.54□□□□□ -0.08
LINC00649-202ENST00000400353 BCANQ96GW7 911 aa14.54□□□□□ -0.08
LINC00649-202ENST00000400353 SMG6Q86US8 1419 aaKnown RBP14.54□□□□□ -0.08
LINC00649-202ENST00000400353 TSPOAP1O95153 1857 aa14.53□□□□□ -0.08
LINC00649-202ENST00000400353 NLRP13Q86W25 1043 aa14.53□□□□□ -0.08
LINC00649-202ENST00000400353 FRMPD1Q5SYB0 1578 aa14.53□□□□□ -0.08
LINC00649-202ENST00000400353 IFT172Q9UG01 1749 aa14.52□□□□□ -0.08
LINC00649-202ENST00000400353 INSRP06213 1382 aa14.52□□□□□ -0.08
LINC00649-202ENST00000400353 PER1O15534 1290 aaPredicted RBP14.52□□□□□ -0.09
LINC00649-202ENST00000400353 ANP32EQ9BTT0 268 aa14.52□□□□□ -0.09
LINC00649-202ENST00000400353 KIF13AQ9H1H9 1805 aa14.52□□□□□ -0.09
LINC00649-202ENST00000400353 RAPGEF3O95398 923 aa14.51□□□□□ -0.09
LINC00649-202ENST00000400353 ZMYM4Q5VZL5 1548 aa14.51□□□□□ -0.09
LINC00649-202ENST00000400353 ABCA6Q8N139 1617 aa14.51□□□□□ -0.09
LINC00649-202ENST00000400353 SYNMO15061 1565 aa14.5□□□□□ -0.09
LINC00649-202ENST00000400353 ADGRB3O60242 1522 aa14.5□□□□□ -0.09
LINC00649-202ENST00000400353 UBE2Q2Q8WVN8 375 aa14.5□□□□□ -0.09
LINC00649-202ENST00000400353 NRXN1Q9ULB1 1477 aa14.5□□□□□ -0.09
LINC00649-202ENST00000400353 CNGB1Q14028 1251 aaPredicted RBP14.48□□□□□ -0.09
LINC00649-202ENST00000400353 NUDCQ9Y266 331 aa14.48□□□□□ -0.09
LINC00649-202ENST00000400353 ABCC3O15438 1527 aa14.48□□□□□ -0.09
LINC00649-202ENST00000400353 PANK3Q9H999 370 aa14.48□□□□□ -0.09
LINC00649-202ENST00000400353 MROH2AA6NES4 1674 aa14.47□□□□□ -0.09
LINC00649-202ENST00000400353 UGGT1Q9NYU2 1555 aa14.47□□□□□ -0.09
LINC00649-202ENST00000400353 SETBP1Q9Y6X0 1596 aa14.46□□□□□ -0.09
LINC00649-202ENST00000400353 TSHZ2Q9NRE2 1034 aa14.46□□□□□ -0.09
LINC00649-202ENST00000400353 RPGRIP1LQ68CZ1 1315 aa14.46□□□□□ -0.09
LINC00649-202ENST00000400353 ZC3H13Q5T200 1668 aaKnown RBP14.46□□□□□ -0.09
LINC00649-202ENST00000400353 DIP2CQ9Y2E4 1556 aa14.46□□□□□ -0.09
LINC00649-202ENST00000400353 NPATQ14207 1427 aa14.46□□□□□ -0.09
LINC00649-202ENST00000400353 CAMSAP1Q5T5Y3 1602 aa14.45□□□□□ -0.1
LINC00649-202ENST00000400353 PPP4R2Q9NY27 417 aa14.45□□□□□ -0.1
LINC00649-202ENST00000400353 MYO3AQ8NEV4 1616 aa14.45□□□□□ -0.1
LINC00649-202ENST00000400353 KDM5AP29375 1690 aaKnown RBP14.45□□□□□ -0.1
LINC00649-202ENST00000400353 RICTORQ6R327 1708 aa14.45□□□□□ -0.1
LINC00649-202ENST00000400353 NPC1L1Q9UHC9 1359 aa14.43□□□□□ -0.1
LINC00649-202ENST00000400353 ARHGAP31Q2M1Z3 1444 aa14.43□□□□□ -0.1
LINC00649-202ENST00000400353 SBNO2Q9Y2G9 1366 aa14.43□□□□□ -0.1
LINC00649-202ENST00000400353 NOS1P29475 1434 aa14.43□□□□□ -0.1
LINC00649-202ENST00000400353 PPLO60437 1756 aa14.42□□□□□ -0.1
LINC00649-202ENST00000400353 PLEKHG5O94827 1062 aa14.42□□□□□ -0.1
LINC00649-202ENST00000400353 KNSTRNQ9Y448 316 aa14.42□□□□□ -0.1
LINC00649-202ENST00000400353 ADGRF5Q8IZF2 1346 aa14.42□□□□□ -0.1
LINC00649-202ENST00000400353 PDE3BQ13370 1112 aa14.42□□□□□ -0.1
LINC00649-202ENST00000400353 GGT6Q6P531 493 aa14.42□□□□□ -0.1
LINC00649-202ENST00000400353 RNF123Q5XPI4 1314 aa14.41□□□□□ -0.1
LINC00649-202ENST00000400353 MYOM1P52179 1685 aa14.41□□□□□ -0.1
LINC00649-202ENST00000400353 ASXL1Q8IXJ9 1541 aa14.4□□□□□ -0.1
LINC00649-202ENST00000400353 CC2D1BQ5T0F9 858 aaKnown RBP14.4□□□□□ -0.1
LINC00649-202ENST00000400353 CFAP70Q5T0N1 1121 aa14.4□□□□□ -0.1
LINC00649-202ENST00000400353 PIK3C2BO00750 1634 aa14.4□□□□□ -0.1
LINC00649-202ENST00000400353 PIK3C2GO75747 1445 aa14.39□□□□□ -0.11
LINC00649-202ENST00000400353 BLMP54132 1417 aaPredicted RBP14.39□□□□□ -0.11
LINC00649-202ENST00000400353 IRX6P78412 446 aaPredicted RBP14.38□□□□□ -0.11
LINC00649-202ENST00000400353 ERVK-7P63135 1459 aa14.38□□□□□ -0.11
LINC00649-202ENST00000400353 CHGAP10645 457 aaKnown RBP14.37□□□□□ -0.11
LINC00649-202ENST00000400353 C14orf93Q9H972 538 aaKnown RBP14.37□□□□□ -0.11
LINC00649-202ENST00000400353 NCBP3Q53F19 620 aaKnown RBP14.36□□□□□ -0.11
LINC00649-202ENST00000400353 AMER1Q5JTC6 1135 aaPredicted RBP14.36□□□□□ -0.11
LINC00649-202ENST00000400353 YEATS2Q9ULM3 1422 aa14.35□□□□□ -0.11
LINC00649-202ENST00000400353 SIGLEC1Q9BZZ2 1709 aa14.35□□□□□ -0.11
LINC00649-202ENST00000400353 CENPJQ9HC77 1338 aaPredicted RBP14.34□□□□□ -0.11
LINC00649-202ENST00000400353 ADGRB1O14514 1584 aa14.34□□□□□ -0.11
LINC00649-202ENST00000400353 REREQ9P2R6 1566 aa14.34□□□□□ -0.11
LINC00649-202ENST00000400353 ZFYVE9O95405 1425 aa14.33□□□□□ -0.12
LINC00649-202ENST00000400353 VGFO15240 615 aaPredicted RBP14.33□□□□□ -0.12
LINC00649-202ENST00000400353 PPP2R1AP30153 589 aa14.33□□□□□ -0.12
LINC00649-202ENST00000400353 SLC52A1Q9NWF4 448 aa14.33□□□□□ -0.12
LINC00649-202ENST00000400353 NEXMIFQ5QGS0 1516 aa14.33□□□□□ -0.12
LINC00649-202ENST00000400353 PUS7Q96PZ0 661 aaKnown RBP14.32□□□□□ -0.12
LINC00649-202ENST00000400353 QRICH2Q9H0J4 1663 aa14.31□□□□□ -0.12
LINC00649-202ENST00000400353 PPP6R1Q9UPN7 881 aa14.31□□□□□ -0.12
LINC00649-202ENST00000400353 WDR43Q15061 677 aaKnown RBP eCLIP14.3□□□□□ -0.12
LINC00649-202ENST00000400353 PREX1Q8TCU6 1659 aa14.3□□□□□ -0.12
LINC00649-202ENST00000400353 AGLP35573 1532 aa14.3□□□□□ -0.12
LINC00649-202ENST00000400353 CFAP65Q6ZU64 1925 aaKnown RBP14.28□□□□□ -0.12
LINC00649-202ENST00000400353 USP32Q8NFA0 1604 aa14.27□□□□□ -0.13
LINC00649-202ENST00000400353 RCAN3Q9UKA8 241 aa14.26□□□□□ -0.13
LINC00649-202ENST00000400353 TMEM131LA2VDJ0 1609 aa14.26□□□□□ -0.13
LINC00649-202ENST00000400353 RRP1P56182 461 aaKnown RBP14.26□□□□□ -0.13
LINC00649-202ENST00000400353 TRAK1Q9UPV9 953 aa14.26□□□□□ -0.13
LINC00649-202ENST00000400353 PODXL2Q9NZ53 605 aa14.25□□□□□ -0.13
LINC00649-202ENST00000400353 ARHGEF28Q8N1W1 1705 aaKnown RBP14.25□□□□□ -0.13
LINC00649-202ENST00000400353 IDI1Q13907 227 aa14.24□□□□□ -0.13
LINC00649-202ENST00000400353 ADAMTS8Q9UP79 889 aa14.24□□□□□ -0.13
LINC00649-202ENST00000400353 RBM19Q9Y4C8 960 aaKnown RBP14.24□□□□□ -0.13
LINC00649-202ENST00000400353 EVC2Q86UK5 1308 aa14.24□□□□□ -0.13
LINC00649-202ENST00000400353 B4GALNT3Q6L9W6 998 aa14.24□□□□□ -0.13
LINC00649-202ENST00000400353 NGEFQ8N5V2 710 aa14.24□□□□□ -0.13
LINC00649-202ENST00000400353 CARD14Q9BXL6 1004 aa14.22□□□□□ -0.13
LINC00649-202ENST00000400353 NINLQ9Y2I6 1382 aa14.22□□□□□ -0.13
LINC00649-202ENST00000400353 MLECQ14165 292 aa14.21□□□□□ -0.13
LINC00649-202ENST00000400353 POLR3AO14802 1390 aaPredicted RBP14.21□□□□□ -0.13
LINC00649-202ENST00000400353 ARHGEF40Q8TER5 1519 aa14.21□□□□□ -0.13
LINC00649-202ENST00000400353 TMEM132EQ6IEE7 984 aa14.21□□□□□ -0.14
LINC00649-202ENST00000400353 CCDC136Q96JN2 1154 aa14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms