RNA–Protein interactions for RNA: ENST00000400188.7

GABRB3-203, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2 BASIC

Gene GABRB3, Length 1,900 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-203ENST00000400188 TXNDC2Q86VQ3 553 aa14.13□□□□□ -0.15
GABRB3-203ENST00000400188 NEURL4Q96JN8 1562 aa14.12□□□□□ -0.15
GABRB3-203ENST00000400188 ZFYVE9O95405 1425 aa14.12□□□□□ -0.15
GABRB3-203ENST00000400188 SPATA31E1Q6ZUB1 1445 aa14.12□□□□□ -0.15
GABRB3-203ENST00000400188 KIF1BO60333 1816 aa14.12□□□□□ -0.15
GABRB3-203ENST00000400188 RIMS2Q9UQ26 1411 aa14.12□□□□□ -0.15
GABRB3-203ENST00000400188 ANKLE2Q86XL3 938 aa14.11□□□□□ -0.15
GABRB3-203ENST00000400188 SCAF11Q99590 1463 aaKnown RBP14.1□□□□□ -0.15
GABRB3-203ENST00000400188 POLR1AO95602 1720 aaPredicted RBP14.09□□□□□ -0.15
GABRB3-203ENST00000400188 ZEB1P37275 1124 aaPredicted RBP14.09□□□□□ -0.15
GABRB3-203ENST00000400188 NEUROD1Q13562 356 aa14.09□□□□□ -0.15
GABRB3-203ENST00000400188 NEXMIFQ5QGS0 1516 aa14.09□□□□□ -0.15
GABRB3-203ENST00000400188 EID1Q9Y6B2 187 aa14.08□□□□□ -0.16
GABRB3-203ENST00000400188 PPP1R15AO75807 674 aaPredicted RBP14.07□□□□□ -0.16
GABRB3-203ENST00000400188 NPHP4O75161 1426 aaPredicted RBP14.06□□□□□ -0.16
GABRB3-203ENST00000400188 MED14O60244 1454 aa14.06□□□□□ -0.16
GABRB3-203ENST00000400188 SLC26A8Q96RN1 970 aa14.05□□□□□ -0.16
GABRB3-203ENST00000400188 ADGRF5Q8IZF2 1346 aa14.05□□□□□ -0.16
GABRB3-203ENST00000400188 IQGAP1P46940 1657 aa14.05□□□□□ -0.16
GABRB3-203ENST00000400188 BCANQ96GW7 911 aa14.04□□□□□ -0.16
GABRB3-203ENST00000400188 PPLO60437 1756 aa14.04□□□□□ -0.16
GABRB3-203ENST00000400188 CCER1Q8TC90 406 aaPredicted RBP14.03□□□□□ -0.16
GABRB3-203ENST00000400188 KDM2AQ9Y2K7 1162 aa14.03□□□□□ -0.16
GABRB3-203ENST00000400188 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.02□□□□□ -0.16
GABRB3-203ENST00000400188 DCAF11Q8TEB1 546 aa14.02□□□□□ -0.16
GABRB3-203ENST00000400188 PLEKHG1Q9ULL1 1385 aa14.02□□□□□ -0.16
GABRB3-203ENST00000400188 IFT172Q9UG01 1749 aa14.02□□□□□ -0.16
GABRB3-203ENST00000400188 ZNF335Q9H4Z2 1342 aaPredicted RBP14.02□□□□□ -0.17
GABRB3-203ENST00000400188 NRXN3Q9Y4C0 1643 aa14.01□□□□□ -0.17
GABRB3-203ENST00000400188 ADAMTS13Q76LX8 1427 aa14.01□□□□□ -0.17
GABRB3-203ENST00000400188 RPGRIP1LQ68CZ1 1315 aa14.01□□□□□ -0.17
GABRB3-203ENST00000400188 DMRT2Q9Y5R5 561 aa14.01□□□□□ -0.17
GABRB3-203ENST00000400188 HDGFP51858 240 aaKnown RBP14□□□□□ -0.17
GABRB3-203ENST00000400188 L3MBTL2Q969R5 705 aa14□□□□□ -0.17
GABRB3-203ENST00000400188 VGFO15240 615 aaPredicted RBP14□□□□□ -0.17
GABRB3-203ENST00000400188 SETBP1Q9Y6X0 1596 aa13.97□□□□□ -0.17
GABRB3-203ENST00000400188 METP08581 1390 aa13.97□□□□□ -0.17
GABRB3-203ENST00000400188 PIK3C2GO75747 1445 aa13.96□□□□□ -0.17
GABRB3-203ENST00000400188 MYOM2P54296 1465 aa13.96□□□□□ -0.17
GABRB3-203ENST00000400188 STRCP1A6NGW2 1772 aa13.95□□□□□ -0.18
GABRB3-203ENST00000400188 NRXN1Q9ULB1 1477 aa13.95□□□□□ -0.18
GABRB3-203ENST00000400188 CFAP70Q5T0N1 1121 aa13.95□□□□□ -0.18
GABRB3-203ENST00000400188 ALKQ9UM73 1620 aa13.95□□□□□ -0.18
GABRB3-203ENST00000400188 RBM33Q96EV2 1170 aaKnown RBP13.94□□□□□ -0.18
GABRB3-203ENST00000400188 TBX22Q9Y458 520 aa13.94□□□□□ -0.18
GABRB3-203ENST00000400188 PTPRUQ92729 1446 aa13.94□□□□□ -0.18
GABRB3-203ENST00000400188 SETD1AO15047 1707 aaKnown RBP13.94□□□□□ -0.18
GABRB3-203ENST00000400188 TMEM132EQ6IEE7 984 aa13.94□□□□□ -0.18
GABRB3-203ENST00000400188 TONSLQ96HA7 1378 aa13.93□□□□□ -0.18
GABRB3-203ENST00000400188 LTBP4Q8N2S1 1624 aa13.93□□□□□ -0.18
GABRB3-203ENST00000400188 ASXL1Q8IXJ9 1541 aa13.92□□□□□ -0.18
GABRB3-203ENST00000400188 CLSPNQ9HAW4 1339 aa13.92□□□□□ -0.18
GABRB3-203ENST00000400188 KCNA6P17658 529 aa13.91□□□□□ -0.18
GABRB3-203ENST00000400188 DIP2AQ14689 1571 aa13.91□□□□□ -0.18
GABRB3-203ENST00000400188 PRAG1Q86YV5 1406 aa13.9□□□□□ -0.18
GABRB3-203ENST00000400188 NBPF8Q3BBV2 869 aa13.9□□□□□ -0.18
GABRB3-203ENST00000400188 C14orf93Q9H972 538 aaKnown RBP13.9□□□□□ -0.18
GABRB3-203ENST00000400188 AMOTL2Q9Y2J4 779 aa13.9□□□□□ -0.18
GABRB3-203ENST00000400188 CHD2O14647 1828 aaKnown RBP13.89□□□□□ -0.19
GABRB3-203ENST00000400188 NBPF1Q3BBV0 1214 aa13.89□□□□□ -0.19
GABRB3-203ENST00000400188 STK26Q9P289 416 aa13.89□□□□□ -0.19
GABRB3-203ENST00000400188 NWD1Q149M9 1564 aa13.87□□□□□ -0.19
GABRB3-203ENST00000400188 ADGRB1O14514 1584 aa13.87□□□□□ -0.19
GABRB3-203ENST00000400188 LRRC7Q96NW7 1537 aa13.86□□□□□ -0.19
GABRB3-203ENST00000400188 STAC3Q96MF2 364 aa13.86□□□□□ -0.19
GABRB3-203ENST00000400188 PIK3R4Q99570 1358 aa13.86□□□□□ -0.19
GABRB3-203ENST00000400188 XRN1Q8IZH2 1706 aaKnown RBP13.85□□□□□ -0.19
GABRB3-203ENST00000400188 ROBO2Q9HCK4 1378 aa13.85□□□□□ -0.19
GABRB3-203ENST00000400188 PROSER2Q86WR7 435 aaPredicted RBP13.84□□□□□ -0.19
GABRB3-203ENST00000400188 CERKQ8TCT0 537 aa13.84□□□□□ -0.19
GABRB3-203ENST00000400188 YTHDC2Q9H6S0 1430 aaKnown RBP13.84□□□□□ -0.19
GABRB3-203ENST00000400188 TMEM94Q12767 1356 aa13.84□□□□□ -0.19
GABRB3-203ENST00000400188 LAMC1P11047 1609 aa13.83□□□□□ -0.19
GABRB3-203ENST00000400188 CPS1P31327 1500 aa13.83□□□□□ -0.2
GABRB3-203ENST00000400188 XIRP1Q702N8 1843 aaKnown RBP13.83□□□□□ -0.2
GABRB3-203ENST00000400188 WAPLQ7Z5K2 1190 aa13.83□□□□□ -0.2
GABRB3-203ENST00000400188 LRPPRCP42704 1394 aaKnown RBP13.82□□□□□ -0.2
GABRB3-203ENST00000400188 PLEKHH1Q9ULM0 1364 aa13.82□□□□□ -0.2
GABRB3-203ENST00000400188 TRPM1Q7Z4N2 1603 aa13.82□□□□□ -0.2
GABRB3-203ENST00000400188 TRAK1Q9UPV9 953 aa13.82□□□□□ -0.2
GABRB3-203ENST00000400188 NKTRP30414 1462 aaKnown RBP13.82□□□□□ -0.2
GABRB3-203ENST00000400188 SAFB2Q14151 953 aaKnown RBP eCLIP13.8□□□□□ -0.2
GABRB3-203ENST00000400188 ABCC11Q96J66 1382 aa13.8□□□□□ -0.2
GABRB3-203ENST00000400188 ROCK2O75116 1388 aaKnown RBP13.79□□□□□ -0.2
GABRB3-203ENST00000400188 KIAA1210Q9ULL0 1709 aa13.79□□□□□ -0.2
GABRB3-203ENST00000400188 TECPR2O15040 1411 aa13.79□□□□□ -0.2
GABRB3-203ENST00000400188 PTCH1Q13635 1447 aa13.79□□□□□ -0.2
GABRB3-203ENST00000400188 PRAM1Q96QH2 718 aa13.78□□□□□ -0.2
GABRB3-203ENST00000400188 TIMELESSQ9UNS1 1208 aa13.78□□□□□ -0.2
GABRB3-203ENST00000400188 C14orf37Q86TY3 774 aa13.77□□□□□ -0.21
GABRB3-203ENST00000400188 RALGAPBQ86X10 1494 aa13.77□□□□□ -0.21
GABRB3-203ENST00000400188 KNDC1Q76NI1 1749 aa13.77□□□□□ -0.21
GABRB3-203ENST00000400188 NALCNQ8IZF0 1738 aa13.75□□□□□ -0.21
GABRB3-203ENST00000400188 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.75□□□□□ -0.21
GABRB3-203ENST00000400188 CARD11Q9BXL7 1154 aa13.75□□□□□ -0.21
GABRB3-203ENST00000400188 ARHGEF28Q8N1W1 1705 aaKnown RBP13.75□□□□□ -0.21
GABRB3-203ENST00000400188 GPRASP1Q5JY77 1395 aa13.75□□□□□ -0.21
GABRB3-203ENST00000400188 HIRIP3Q9BW71 556 aaPredicted RBP13.74□□□□□ -0.21
GABRB3-203ENST00000400188 POGKQ9P215 609 aa13.74□□□□□ -0.21
GABRB3-203ENST00000400188 DLC1Q96QB1 1528 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms