RNA–Protein interactions for RNA: ENST00000400075.3

GABPA-202, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 4,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-202ENST00000400075 EHBP1L1Q8N3D4 1523 aa18.16■□□□□ 0.5
GABPA-202ENST00000400075 PDE3BQ13370 1112 aa18.16■□□□□ 0.5
GABPA-202ENST00000400075 EPRSP07814 1512 aaKnown RBP18.16■□□□□ 0.5
GABPA-202ENST00000400075 ZNF692Q9BU19 519 aaPredicted RBP18.15■□□□□ 0.5
GABPA-202ENST00000400075 GPATCH3Q96I76 525 aa18.14■□□□□ 0.49
GABPA-202ENST00000400075 CDK13Q14004 1512 aaKnown RBP18.13■□□□□ 0.49
GABPA-202ENST00000400075 PPP1R1BQ9UD71 204 aaPredicted RBP18.13■□□□□ 0.49
GABPA-202ENST00000400075 MCCP23508 829 aa18.13■□□□□ 0.49
GABPA-202ENST00000400075 XPCQ01831 940 aaPredicted RBP18.13■□□□□ 0.49
GABPA-202ENST00000400075 GOLGA6L22H0YM25 854 aa18.12■□□□□ 0.49
GABPA-202ENST00000400075 CLUAP1Q96AJ1 413 aa18.12■□□□□ 0.49
GABPA-202ENST00000400075 DDX58O95786 925 aaKnown RBP18.12■□□□□ 0.49
GABPA-202ENST00000400075 FBXO31Q5XUX0 539 aaPredicted RBP18.12■□□□□ 0.49
GABPA-202ENST00000400075 MYBBP1AQ9BQG0 1328 aaKnown RBP18.12■□□□□ 0.49
GABPA-202ENST00000400075 TATP17735 454 aaPredicted RBP18.12■□□□□ 0.49
GABPA-202ENST00000400075 CDK19Q9BWU1 502 aa18.12■□□□□ 0.49
GABPA-202ENST00000400075 TEX14Q8IWB6 1497 aa18.12■□□□□ 0.49
GABPA-202ENST00000400075 WASHC2AQ641Q2 1341 aa18.11■□□□□ 0.49
GABPA-202ENST00000400075 UBAP1LF5GYI3 381 aa18.11■□□□□ 0.49
GABPA-202ENST00000400075 CFAP44Q96MT7 982 aa18.11■□□□□ 0.49
GABPA-202ENST00000400075 TOM1O60784 492 aa18.1■□□□□ 0.49
GABPA-202ENST00000400075 PEG3Q9GZU2 1588 aa18.1■□□□□ 0.49
GABPA-202ENST00000400075 HMOX1P09601 288 aa18.1■□□□□ 0.49
GABPA-202ENST00000400075 ANKRD30BQ9BXX2 1392 aa18.1■□□□□ 0.49
GABPA-202ENST00000400075 RCAN3Q9UKA8 241 aa18.09■□□□□ 0.49
GABPA-202ENST00000400075 PLEKHO1Q53GL0 409 aaPredicted RBP18.09■□□□□ 0.49
GABPA-202ENST00000400075 NGLY1Q96IV0 654 aa18.09■□□□□ 0.49
GABPA-202ENST00000400075 DDX54Q8TDD1 881 aaKnown RBP18.09■□□□□ 0.49
GABPA-202ENST00000400075 C9orf78Q9NZ63 289 aaPredicted RBP18.09■□□□□ 0.49
GABPA-202ENST00000400075 CABP1Q9NZU7 370 aa18.09■□□□□ 0.49
GABPA-202ENST00000400075 FANCAO15360 1455 aa18.08■□□□□ 0.49
GABPA-202ENST00000400075 RBM42Q9BTD8 480 aaKnown RBP18.08■□□□□ 0.49
GABPA-202ENST00000400075 RWDD1Q9H446 243 aaPredicted RBP18.08■□□□□ 0.49
GABPA-202ENST00000400075 CUL7Q14999 1698 aa18.08■□□□□ 0.48
GABPA-202ENST00000400075 RTEL1-TNFRSF6BF6WH68 1400 aa18.08■□□□□ 0.48
GABPA-202ENST00000400075 CCDC141Q6ZP82 1450 aa18.08■□□□□ 0.48
GABPA-202ENST00000400075 ADAMTS2O95450 1211 aa18.07■□□□□ 0.48
GABPA-202ENST00000400075 RIPK4P57078 832 aa18.07■□□□□ 0.48
GABPA-202ENST00000400075 NECTIN2Q92692 538 aa18.07■□□□□ 0.48
GABPA-202ENST00000400075 ZC3H6P61129 1189 aaKnown RBP18.07■□□□□ 0.48
GABPA-202ENST00000400075 TPRNQ4KMQ1 711 aa18.07■□□□□ 0.48
GABPA-202ENST00000400075 B4GALNT3Q6L9W6 998 aa18.07■□□□□ 0.48
GABPA-202ENST00000400075 ASXL2Q76L83 1435 aa18.06■□□□□ 0.48
GABPA-202ENST00000400075 ERBINQ96RT1 1412 aa18.06■□□□□ 0.48
GABPA-202ENST00000400075 PPP4R2Q9NY27 417 aa18.06■□□□□ 0.48
GABPA-202ENST00000400075 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.06■□□□□ 0.48
GABPA-202ENST00000400075 AMOTL2Q9Y2J4 779 aa18.05■□□□□ 0.48
GABPA-202ENST00000400075 DDRGK1Q96HY6 314 aa18.05■□□□□ 0.48
GABPA-202ENST00000400075 IDI1Q13907 227 aa18.05■□□□□ 0.48
GABPA-202ENST00000400075 TSPYL4Q9UJ04 414 aa18.05■□□□□ 0.48
GABPA-202ENST00000400075 CCDC61Q9Y6R9 512 aa18.05■□□□□ 0.48
GABPA-202ENST00000400075 RBM33Q96EV2 1170 aaKnown RBP18.04■□□□□ 0.48
GABPA-202ENST00000400075 SMG6Q86US8 1419 aaKnown RBP18.04■□□□□ 0.48
GABPA-202ENST00000400075 UNC13AQ9UPW8 1703 aa18.04■□□□□ 0.48
GABPA-202ENST00000400075 CADPS2Q86UW7 1296 aa18.03■□□□□ 0.48
GABPA-202ENST00000400075 VPS37DQ86XT2 251 aa18.03■□□□□ 0.48
GABPA-202ENST00000400075 APAF1O14727 1248 aa18.03■□□□□ 0.48
GABPA-202ENST00000400075 HMGB2P26583 209 aaKnown RBP18.03■□□□□ 0.48
GABPA-202ENST00000400075 NBPF1Q3BBV0 1214 aa18.03■□□□□ 0.48
GABPA-202ENST00000400075 TOMM22Q9NS69 142 aa18.03■□□□□ 0.48
GABPA-202ENST00000400075 FOXO3O43524 673 aa18.02■□□□□ 0.48
GABPA-202ENST00000400075 NOL10Q9BSC4 688 aaKnown RBP18.02■□□□□ 0.48
GABPA-202ENST00000400075 SLC12A5Q9H2X9 1139 aa18.02■□□□□ 0.48
GABPA-202ENST00000400075 DAPK1P53355 1430 aa18.02■□□□□ 0.47
GABPA-202ENST00000400075 GAS2L2Q8NHY3 880 aa18.01■□□□□ 0.47
GABPA-202ENST00000400075 TRIM6-TRIM34B2RNG4 842 aa18.01■□□□□ 0.47
GABPA-202ENST00000400075 FBXW7Q969H0 707 aa18.01■□□□□ 0.47
GABPA-202ENST00000400075 KIAA1107Q9UPP5 1409 aa18.01■□□□□ 0.47
GABPA-202ENST00000400075 FKBP5Q13451 457 aaPredicted RBP18■□□□□ 0.47
GABPA-202ENST00000400075 GNL2Q13823 731 aaKnown RBP18■□□□□ 0.47
GABPA-202ENST00000400075 HSPA2P54652 639 aa17.99■□□□□ 0.47
GABPA-202ENST00000400075 MTHFSP49914 203 aa17.99■□□□□ 0.47
GABPA-202ENST00000400075 NUDT16Q96DE0 195 aaKnown RBP17.99■□□□□ 0.47
GABPA-202ENST00000400075 AIMP1Q12904 312 aaKnown RBP17.98■□□□□ 0.47
GABPA-202ENST00000400075 SPG7Q9UQ90 795 aa17.98■□□□□ 0.47
GABPA-202ENST00000400075 RIC3Q7Z5B4 369 aa17.98■□□□□ 0.47
GABPA-202ENST00000400075 GNAI1P63096 354 aa17.98■□□□□ 0.47
GABPA-202ENST00000400075 BCL2L13Q9BXK5 485 aa17.98■□□□□ 0.47
GABPA-202ENST00000400075 PHF8Q9UPP1 1060 aa17.98■□□□□ 0.47
GABPA-202ENST00000400075 HSP90AB1P08238 724 aaKnown RBP17.97■□□□□ 0.47
GABPA-202ENST00000400075 TRIM34Q9BYJ4 488 aa17.97■□□□□ 0.47
GABPA-202ENST00000400075 WAPLQ7Z5K2 1190 aa17.97■□□□□ 0.47
GABPA-202ENST00000400075 KCNH5Q8NCM2 988 aa17.97■□□□□ 0.47
GABPA-202ENST00000400075 HSP90B1P14625 803 aaKnown RBP17.97■□□□□ 0.47
GABPA-202ENST00000400075 TNRQ92752 1358 aa17.97■□□□□ 0.47
GABPA-202ENST00000400075 KIF14Q15058 1648 aa17.96■□□□□ 0.47
GABPA-202ENST00000400075 E9PSI1 815 aa17.96■□□□□ 0.47
GABPA-202ENST00000400075 CLSTN1O94985 981 aa17.96■□□□□ 0.47
GABPA-202ENST00000400075 GOLGA6L4A6NEF3 574 aa17.96■□□□□ 0.47
GABPA-202ENST00000400075 FAM177BA6PVY3 158 aa17.96■□□□□ 0.47
GABPA-202ENST00000400075 CABP4P57796 275 aa17.96■□□□□ 0.47
GABPA-202ENST00000400075 PRKRIP1Q9H875 184 aaPredicted RBP17.96■□□□□ 0.47
GABPA-202ENST00000400075 TCERG1O14776 1098 aaKnown RBP17.96■□□□□ 0.46
GABPA-202ENST00000400075 ZNF530Q6P9A1 599 aaPredicted RBP17.95■□□□□ 0.46
GABPA-202ENST00000400075 RUNDC1Q96C34 613 aa17.95■□□□□ 0.46
GABPA-202ENST00000400075 ATAD2Q6PL18 1390 aa17.94■□□□□ 0.46
GABPA-202ENST00000400075 DHX29Q7Z478 1369 aaKnown RBP17.93■□□□□ 0.46
GABPA-202ENST00000400075 AMOTL1Q8IY63 956 aa17.93■□□□□ 0.46
GABPA-202ENST00000400075 LRRFIP1Q32MZ4 808 aaKnown RBP17.92■□□□□ 0.46
GABPA-202ENST00000400075 SUPT6HQ7KZ85 1726 aaKnown RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms