RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 EXOC6Q8TAG9 804 aa16.91■□□□□ 0.3
VAPA-202ENST00000400000 AMOTL1Q8IY63 956 aa16.9■□□□□ 0.3
VAPA-202ENST00000400000 FAM69CQ0P6D2 419 aa16.9■□□□□ 0.3
VAPA-202ENST00000400000 BECN2A8MW95 431 aa16.9■□□□□ 0.3
VAPA-202ENST00000400000 DDX49Q9Y6V7 483 aaKnown RBP16.89■□□□□ 0.29
VAPA-202ENST00000400000 RBM33Q96EV2 1170 aaKnown RBP16.89■□□□□ 0.29
VAPA-202ENST00000400000 PTMSP20962 102 aa16.89■□□□□ 0.29
VAPA-202ENST00000400000 NEUROD6Q96NK8 337 aa16.89■□□□□ 0.29
VAPA-202ENST00000400000 IFIT2P09913 472 aaKnown RBP16.89■□□□□ 0.29
VAPA-202ENST00000400000 JPH4Q96JJ6 628 aa16.89■□□□□ 0.29
VAPA-202ENST00000400000 NEXNQ0ZGT2 675 aa16.88■□□□□ 0.29
VAPA-202ENST00000400000 STRN4Q9NRL3 753 aa16.88■□□□□ 0.29
VAPA-202ENST00000400000 NACADO15069 1562 aa16.88■□□□□ 0.29
VAPA-202ENST00000400000 IPO9Q96P70 1041 aaKnown RBP16.88■□□□□ 0.29
VAPA-202ENST00000400000 PIP4K2BP78356 416 aa16.88■□□□□ 0.29
VAPA-202ENST00000400000 TRIM29Q14134 588 aa16.88■□□□□ 0.29
VAPA-202ENST00000400000 ATF3P18847 181 aa16.87■□□□□ 0.29
VAPA-202ENST00000400000 APAF1O14727 1248 aa16.86■□□□□ 0.29
VAPA-202ENST00000400000 TPM2P07951 284 aa16.86■□□□□ 0.29
VAPA-202ENST00000400000 CHMP4CQ96CF2 233 aa16.86■□□□□ 0.29
VAPA-202ENST00000400000 FKBP5Q13451 457 aaPredicted RBP16.86■□□□□ 0.29
VAPA-202ENST00000400000 CCDC43Q96MW1 224 aaKnown RBP16.86■□□□□ 0.29
VAPA-202ENST00000400000 PDS5BQ9NTI5 1447 aa16.86■□□□□ 0.29
VAPA-202ENST00000400000 NLRP2Q9NX02 1062 aa16.86■□□□□ 0.29
VAPA-202ENST00000400000 HDAC5Q9UQL6 1122 aa16.86■□□□□ 0.29
VAPA-202ENST00000400000 NAP1L1P55209 391 aaKnown RBP16.85■□□□□ 0.29
VAPA-202ENST00000400000 SKIDA1Q1XH10 827 aa16.85■□□□□ 0.29
VAPA-202ENST00000400000 IKQ13123 557 aaPredicted RBP16.85■□□□□ 0.29
VAPA-202ENST00000400000 SMARCA2P51531 1590 aa16.85■□□□□ 0.29
VAPA-202ENST00000400000 CPLX1O14810 134 aa16.85■□□□□ 0.29
VAPA-202ENST00000400000 RIPK4P57078 832 aa16.85■□□□□ 0.29
VAPA-202ENST00000400000 PHF14O94880 888 aa16.84■□□□□ 0.29
VAPA-202ENST00000400000 VPS37CA5D8V6 355 aaPredicted RBP16.84■□□□□ 0.29
VAPA-202ENST00000400000 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.84■□□□□ 0.292e-7■■■■□ 25.1
VAPA-202ENST00000400000 TSHZ2Q9NRE2 1034 aa16.84■□□□□ 0.29
VAPA-202ENST00000400000 BICD2Q8TD16 824 aa16.83■□□□□ 0.28
VAPA-202ENST00000400000 TTLL5Q6EMB2 1281 aa16.83■□□□□ 0.28
VAPA-202ENST00000400000 NLRP13Q86W25 1043 aa16.83■□□□□ 0.28
VAPA-202ENST00000400000 WASHC4Q2M389 1173 aa16.83■□□□□ 0.28
VAPA-202ENST00000400000 BAZ1AQ9NRL2 1556 aaPredicted RBP16.83■□□□□ 0.28
VAPA-202ENST00000400000 FAM161AQ3B820 660 aa16.82■□□□□ 0.28
VAPA-202ENST00000400000 CCDC88BA6NC98 1476 aa16.82■□□□□ 0.28
VAPA-202ENST00000400000 IBSPP21815 317 aaPredicted RBP16.82■□□□□ 0.28
VAPA-202ENST00000400000 RIC3Q7Z5B4 369 aa16.82■□□□□ 0.28
VAPA-202ENST00000400000 KIF3AQ9Y496 699 aa16.82■□□□□ 0.28
VAPA-202ENST00000400000 RBM42Q9BTD8 480 aaKnown RBP16.82■□□□□ 0.28
VAPA-202ENST00000400000 ZFYVE27Q5T4F4 411 aa16.81■□□□□ 0.28
VAPA-202ENST00000400000 TSPYL4Q9UJ04 414 aa16.81■□□□□ 0.28
VAPA-202ENST00000400000 ZKSCAN2Q63HK3 967 aa16.81■□□□□ 0.28
VAPA-202ENST00000400000 CHMP4AQ9BY43 222 aa16.81■□□□□ 0.28
VAPA-202ENST00000400000 EVC2Q86UK5 1308 aa16.8■□□□□ 0.28
VAPA-202ENST00000400000 G3BP1Q13283 466 aaKnown RBP eCLIP16.8■□□□□ 0.282e-6■■■■□ 24.6
VAPA-202ENST00000400000 CABP2Q9NPB3 220 aa16.8■□□□□ 0.28
VAPA-202ENST00000400000 CGNL1Q0VF96 1302 aa16.8■□□□□ 0.28
VAPA-202ENST00000400000 ERICH2A1L162 156 aa16.79■□□□□ 0.28
VAPA-202ENST00000400000 TPM1P09493 284 aa16.79■□□□□ 0.28
VAPA-202ENST00000400000 TMEM132EQ6IEE7 984 aa16.79■□□□□ 0.28
VAPA-202ENST00000400000 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.79■□□□□ 0.28
VAPA-202ENST00000400000 DCAF8L1A6NGE4 600 aa16.79■□□□□ 0.28
VAPA-202ENST00000400000 TRDNQ13061 729 aa16.79■□□□□ 0.28
VAPA-202ENST00000400000 CCDC144AA2RUR9 1427 aa16.78■□□□□ 0.28
VAPA-202ENST00000400000 ATP2B1P20020 1258 aa16.78■□□□□ 0.28
VAPA-202ENST00000400000 TMEM132AQ24JP5 1023 aa16.78■□□□□ 0.28
VAPA-202ENST00000400000 HOMER1Q86YM7 354 aa16.78■□□□□ 0.28
VAPA-202ENST00000400000 PRDM2Q13029 1718 aa16.78■□□□□ 0.28
VAPA-202ENST00000400000 DIAPH1O60610 1272 aaKnown RBP16.77■□□□□ 0.28
VAPA-202ENST00000400000 LNPKQ9C0E8 428 aa16.77■□□□□ 0.28
VAPA-202ENST00000400000 RAPGEF4Q8WZA2 1011 aa16.77■□□□□ 0.27
VAPA-202ENST00000400000 ATP2B2Q01814 1243 aa16.77■□□□□ 0.27
VAPA-202ENST00000400000 ESCO1Q5FWF5 840 aa16.77■□□□□ 0.27
VAPA-202ENST00000400000 GGNBP2Q9H3C7 697 aa16.76■□□□□ 0.27
VAPA-202ENST00000400000 MYBBP1AQ9BQG0 1328 aaKnown RBP16.76■□□□□ 0.27
VAPA-202ENST00000400000 PDE4AP27815 886 aa16.76■□□□□ 0.27
VAPA-202ENST00000400000 KIF15Q9NS87 1388 aa16.76■□□□□ 0.27
VAPA-202ENST00000400000 VGFO15240 615 aaPredicted RBP16.75■□□□□ 0.27
VAPA-202ENST00000400000 RRP12Q5JTH9 1297 aaKnown RBP16.75■□□□□ 0.27
VAPA-202ENST00000400000 CT47A1Q5JQC4 288 aaPredicted RBP16.75■□□□□ 0.27
VAPA-202ENST00000400000 DNAJC2Q99543 621 aaKnown RBP16.75■□□□□ 0.27
VAPA-202ENST00000400000 FMN1Q68DA7 1419 aa16.74■□□□□ 0.27
VAPA-202ENST00000400000 ZKSCAN1P17029 563 aaPredicted RBP16.74■□□□□ 0.27
VAPA-202ENST00000400000 VPS8Q8N3P4 1428 aa16.74■□□□□ 0.27
VAPA-202ENST00000400000 OSCARQ8IYS5 282 aa16.73■□□□□ 0.27
VAPA-202ENST00000400000 PDILTQ8N807 584 aa16.73■□□□□ 0.27
VAPA-202ENST00000400000 DDX11L8A8MPP1 907 aa16.73■□□□□ 0.27
VAPA-202ENST00000400000 CCAR1Q8IX12 1150 aaKnown RBP16.73■□□□□ 0.27
VAPA-202ENST00000400000 CPLX2Q6PUV4 134 aaKnown RBP16.73■□□□□ 0.27
VAPA-202ENST00000400000 RRP1P56182 461 aaKnown RBP16.73■□□□□ 0.27
VAPA-202ENST00000400000 DHX37Q8IY37 1157 aaKnown RBP16.73■□□□□ 0.27
VAPA-202ENST00000400000 DDX58O95786 925 aaKnown RBP16.72■□□□□ 0.27
VAPA-202ENST00000400000 MAP4K4O95819 1239 aaPredicted RBP16.72■□□□□ 0.27
VAPA-202ENST00000400000 DDX54Q8TDD1 881 aaKnown RBP16.72■□□□□ 0.27
VAPA-202ENST00000400000 ODF2Q5BJF6 829 aa16.72■□□□□ 0.27
VAPA-202ENST00000400000 ZNF771Q7L3S4 317 aaPredicted RBP16.72■□□□□ 0.27
VAPA-202ENST00000400000 RUFY2Q8WXA3 655 aa16.72■□□□□ 0.27
VAPA-202ENST00000400000 C1orf115Q9H7X2 142 aa16.72■□□□□ 0.27
VAPA-202ENST00000400000 TIMELESSQ9UNS1 1208 aa16.72■□□□□ 0.27
VAPA-202ENST00000400000 PANK1Q8TE04 598 aa16.72■□□□□ 0.27
VAPA-202ENST00000400000 XPCQ01831 940 aaPredicted RBP16.71■□□□□ 0.27
VAPA-202ENST00000400000 CEBPZQ03701 1054 aaKnown RBP16.71■□□□□ 0.27
VAPA-202ENST00000400000 CENPQQ7L2Z9 268 aaPredicted RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms