RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 RIMS2Q9UQ26 1411 aa25.91■■□□□ 1.74
CTNS-203ENST00000399306 TXNDC2Q86VQ3 553 aa25.91■■□□□ 1.74
CTNS-203ENST00000399306 RPGRIP1LQ68CZ1 1315 aa25.9■■□□□ 1.74
CTNS-203ENST00000399306 LTKP29376 864 aa25.89■■□□□ 1.74
CTNS-203ENST00000399306 NPHP4O75161 1426 aaPredicted RBP25.88■■□□□ 1.73
CTNS-203ENST00000399306 SPATA31E1Q6ZUB1 1445 aa25.88■■□□□ 1.73
CTNS-203ENST00000399306 DHX57Q6P158 1386 aaKnown RBP25.88■■□□□ 1.73
CTNS-203ENST00000399306 IQGAP1P46940 1657 aa25.87■■□□□ 1.73
CTNS-203ENST00000399306 PLEKHG1Q9ULL1 1385 aa25.84■■□□□ 1.73
CTNS-203ENST00000399306 NEXMIFQ5QGS0 1516 aa25.84■■□□□ 1.73
CTNS-203ENST00000399306 ZNF326Q5BKZ1 582 aaKnown RBP25.83■■□□□ 1.73
CTNS-203ENST00000399306 PPLO60437 1756 aa25.8■■□□□ 1.72
CTNS-203ENST00000399306 PPP1R15AO75807 674 aaPredicted RBP25.79■■□□□ 1.72
CTNS-203ENST00000399306 VGFO15240 615 aaPredicted RBP25.78■■□□□ 1.72
CTNS-203ENST00000399306 STAC3Q96MF2 364 aa25.78■■□□□ 1.72
CTNS-203ENST00000399306 IFT172Q9UG01 1749 aa25.77■■□□□ 1.72
CTNS-203ENST00000399306 DIP2AQ14689 1571 aa25.76■■□□□ 1.71
CTNS-203ENST00000399306 SETBP1Q9Y6X0 1596 aa25.75■■□□□ 1.71
CTNS-203ENST00000399306 TBX22Q9Y458 520 aa25.72■■□□□ 1.71
CTNS-203ENST00000399306 RGL3Q3MIN7 710 aa25.71■■□□□ 1.71
CTNS-203ENST00000399306 MYOM2P54296 1465 aa25.71■■□□□ 1.71
CTNS-203ENST00000399306 ADAMTS13Q76LX8 1427 aa25.7■■□□□ 1.7
CTNS-203ENST00000399306 PIK3R4Q99570 1358 aa25.69■■□□□ 1.7
CTNS-203ENST00000399306 CLSPNQ9HAW4 1339 aa25.69■■□□□ 1.7
CTNS-203ENST00000399306 NRXN3Q9Y4C0 1643 aa25.68■■□□□ 1.7
CTNS-203ENST00000399306 NRXN1Q9ULB1 1477 aa25.66■■□□□ 1.7
CTNS-203ENST00000399306 NUTM2DQ5VT03 806 aaPredicted RBP25.66■■□□□ 1.7
CTNS-203ENST00000399306 LTBP4Q8N2S1 1624 aa25.66■■□□□ 1.7
CTNS-203ENST00000399306 BCANQ96GW7 911 aa25.65■■□□□ 1.7
CTNS-203ENST00000399306 CPS1P31327 1500 aa25.64■■□□□ 1.7
CTNS-203ENST00000399306 SLC26A8Q96RN1 970 aa25.64■■□□□ 1.7
CTNS-203ENST00000399306 ZNF335Q9H4Z2 1342 aaPredicted RBP25.63■■□□□ 1.69
CTNS-203ENST00000399306 PIK3C2GO75747 1445 aa25.62■■□□□ 1.69
CTNS-203ENST00000399306 NWD1Q149M9 1564 aa25.61■■□□□ 1.69
CTNS-203ENST00000399306 CHD2O14647 1828 aaKnown RBP25.61■■□□□ 1.69
CTNS-203ENST00000399306 ADGRF5Q8IZF2 1346 aa25.61■■□□□ 1.69
CTNS-203ENST00000399306 KCNA6P17658 529 aa25.6■■□□□ 1.69
CTNS-203ENST00000399306 IQSEC2Q5JU85 1478 aa25.6■■□□□ 1.69
CTNS-203ENST00000399306 ALKQ9UM73 1620 aa25.59■■□□□ 1.69
CTNS-203ENST00000399306 SETD1AO15047 1707 aaKnown RBP25.59■■□□□ 1.69
CTNS-203ENST00000399306 SIN3AQ96ST3 1273 aa25.58■■□□□ 1.69
CTNS-203ENST00000399306 LAMC1P11047 1609 aa25.58■■□□□ 1.69
CTNS-203ENST00000399306 DCAF11Q8TEB1 546 aa25.57■■□□□ 1.68
CTNS-203ENST00000399306 NKTRP30414 1462 aaKnown RBP25.57■■□□□ 1.68
CTNS-203ENST00000399306 STRCP1A6NGW2 1772 aa25.56■■□□□ 1.68
CTNS-203ENST00000399306 PRAG1Q86YV5 1406 aa25.54■■□□□ 1.68
CTNS-203ENST00000399306 C14orf93Q9H972 538 aaKnown RBP25.53■■□□□ 1.68
CTNS-203ENST00000399306 NEUROD1Q13562 356 aa25.52■■□□□ 1.68
CTNS-203ENST00000399306 CERKQ8TCT0 537 aa25.51■■□□□ 1.67
CTNS-203ENST00000399306 METP08581 1390 aa25.51■■□□□ 1.67
CTNS-203ENST00000399306 XRN1Q8IZH2 1706 aaKnown RBP25.5■■□□□ 1.67
CTNS-203ENST00000399306 L3MBTL2Q969R5 705 aa25.5■■□□□ 1.67
CTNS-203ENST00000399306 TIMELESSQ9UNS1 1208 aa25.49■■□□□ 1.67
CTNS-203ENST00000399306 KIAA1210Q9ULL0 1709 aa25.49■■□□□ 1.67
CTNS-203ENST00000399306 LRRC7Q96NW7 1537 aa25.48■■□□□ 1.67
CTNS-203ENST00000399306 PTPRUQ92729 1446 aa25.48■■□□□ 1.67
CTNS-203ENST00000399306 NCOA3Q9Y6Q9 1424 aa25.48■■□□□ 1.67
CTNS-203ENST00000399306 KDM2AQ9Y2K7 1162 aa25.47■■□□□ 1.67
CTNS-203ENST00000399306 TONSLQ96HA7 1378 aa25.46■■□□□ 1.67
CTNS-203ENST00000399306 AMOTL2Q9Y2J4 779 aa25.46■■□□□ 1.67
CTNS-203ENST00000399306 CCER1Q8TC90 406 aaPredicted RBP25.45■■□□□ 1.66
CTNS-203ENST00000399306 SENP3Q9H4L4 574 aaPredicted RBP25.45■■□□□ 1.66
CTNS-203ENST00000399306 TECPR2O15040 1411 aa25.44■■□□□ 1.66
CTNS-203ENST00000399306 PTCH1Q13635 1447 aa25.44■■□□□ 1.66
CTNS-203ENST00000399306 LRPPRCP42704 1394 aaKnown RBP25.43■■□□□ 1.66
CTNS-203ENST00000399306 ABCC11Q96J66 1382 aa25.43■■□□□ 1.66
CTNS-203ENST00000399306 ASXL1Q8IXJ9 1541 aa25.42■■□□□ 1.66
CTNS-203ENST00000399306 CFAP70Q5T0N1 1121 aa25.42■■□□□ 1.66
CTNS-203ENST00000399306 KNDC1Q76NI1 1749 aa25.42■■□□□ 1.66
CTNS-203ENST00000399306 PROSER2Q86WR7 435 aaPredicted RBP25.41■■□□□ 1.66
CTNS-203ENST00000399306 ADGRB1O14514 1584 aa25.4■■□□□ 1.66
CTNS-203ENST00000399306 XIRP1Q702N8 1843 aaKnown RBP25.4■■□□□ 1.66
CTNS-203ENST00000399306 SIRT1Q96EB6 747 aa25.39■■□□□ 1.66
CTNS-203ENST00000399306 TMEM94Q12767 1356 aa25.39■■□□□ 1.65
CTNS-203ENST00000399306 YTHDC2Q9H6S0 1430 aaKnown RBP25.38■■□□□ 1.65
CTNS-203ENST00000399306 DLC1Q96QB1 1528 aa25.35■■□□□ 1.65
CTNS-203ENST00000399306 TMEM132EQ6IEE7 984 aa25.34■■□□□ 1.65
CTNS-203ENST00000399306 FAM135BQ49AJ0 1406 aa25.34■■□□□ 1.65
CTNS-203ENST00000399306 TRPM1Q7Z4N2 1603 aa25.32■■□□□ 1.64
CTNS-203ENST00000399306 ROBO2Q9HCK4 1378 aa25.31■■□□□ 1.64
CTNS-203ENST00000399306 DCCP43146 1447 aa25.3■■□□□ 1.64
CTNS-203ENST00000399306 MSH6P52701 1360 aa25.3■■□□□ 1.64
CTNS-203ENST00000399306 C19orf44Q9H6X5 657 aa25.29■■□□□ 1.64
CTNS-203ENST00000399306 TOM1O60784 492 aa25.27■■□□□ 1.64
CTNS-203ENST00000399306 GPRASP1Q5JY77 1395 aa25.27■■□□□ 1.64
CTNS-203ENST00000399306 ADGRL3Q9HAR2 1447 aa25.27■■□□□ 1.64
CTNS-203ENST00000399306 FBXO41Q8TF61 875 aa25.26■■□□□ 1.63
CTNS-203ENST00000399306 STK26Q9P289 416 aa25.26■■□□□ 1.63
CTNS-203ENST00000399306 RALGAPBQ86X10 1494 aa25.26■■□□□ 1.63
CTNS-203ENST00000399306 NBPF8Q3BBV2 869 aa25.25■■□□□ 1.63
CTNS-203ENST00000399306 NBPF1Q3BBV0 1214 aa25.24■■□□□ 1.63
CTNS-203ENST00000399306 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.23■■□□□ 1.63
CTNS-203ENST00000399306 CADPS2Q86UW7 1296 aa25.22■■□□□ 1.63
CTNS-203ENST00000399306 ROCK2O75116 1388 aaKnown RBP25.21■■□□□ 1.63
CTNS-203ENST00000399306 NALCNQ8IZF0 1738 aa25.21■■□□□ 1.63
CTNS-203ENST00000399306 ARHGEF28Q8N1W1 1705 aaKnown RBP25.21■■□□□ 1.63
CTNS-203ENST00000399306 C14orf37Q86TY3 774 aa25.21■■□□□ 1.63
CTNS-203ENST00000399306 UBAP1LF5GYI3 381 aa25.2■■□□□ 1.62
CTNS-203ENST00000399306 RBM33Q96EV2 1170 aaKnown RBP25.2■■□□□ 1.62
CTNS-203ENST00000399306 TRAK1Q9UPV9 953 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 147.7 ms