RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 MAP3K4Q9Y6R4 1608 aa23.97■■□□□ 1.43
HLA-DQB1-204ENST00000399084 RPGRIP1LQ68CZ1 1315 aa23.97■■□□□ 1.43
HLA-DQB1-204ENST00000399084 NRXN1Q9ULB1 1477 aa23.96■■□□□ 1.43
HLA-DQB1-204ENST00000399084 ZMYM4Q5VZL5 1548 aa23.96■■□□□ 1.43
HLA-DQB1-204ENST00000399084 IFT172Q9UG01 1749 aa23.93■■□□□ 1.42
HLA-DQB1-204ENST00000399084 SMG6Q86US8 1419 aaKnown RBP23.93■■□□□ 1.42
HLA-DQB1-204ENST00000399084 ABCA6Q8N139 1617 aa23.93■■□□□ 1.42
HLA-DQB1-204ENST00000399084 ADGRB3O60242 1522 aa23.92■■□□□ 1.42
HLA-DQB1-204ENST00000399084 NPATQ14207 1427 aa23.91■■□□□ 1.42
HLA-DQB1-204ENST00000399084 ARHGAP31Q2M1Z3 1444 aa23.91■■□□□ 1.42
HLA-DQB1-204ENST00000399084 PANK3Q9H999 370 aa23.9■■□□□ 1.42
HLA-DQB1-204ENST00000399084 ABCC3O15438 1527 aa23.9■■□□□ 1.42
HLA-DQB1-204ENST00000399084 SETBP1Q9Y6X0 1596 aa23.89■■□□□ 1.42
HLA-DQB1-204ENST00000399084 SYNMO15061 1565 aa23.89■■□□□ 1.41
HLA-DQB1-204ENST00000399084 SBNO2Q9Y2G9 1366 aa23.89■■□□□ 1.41
HLA-DQB1-204ENST00000399084 NPC1L1Q9UHC9 1359 aa23.88■■□□□ 1.41
HLA-DQB1-204ENST00000399084 ZC3H13Q5T200 1668 aaKnown RBP23.88■■□□□ 1.41
HLA-DQB1-204ENST00000399084 RICTORQ6R327 1708 aa23.87■■□□□ 1.41
HLA-DQB1-204ENST00000399084 DIP2CQ9Y2E4 1556 aa23.87■■□□□ 1.41
HLA-DQB1-204ENST00000399084 NOS1P29475 1434 aa23.86■■□□□ 1.41
HLA-DQB1-204ENST00000399084 GGT6Q6P531 493 aa23.86■■□□□ 1.41
HLA-DQB1-204ENST00000399084 NUDCQ9Y266 331 aa23.84■■□□□ 1.41
HLA-DQB1-204ENST00000399084 UGGT1Q9NYU2 1555 aa23.83■■□□□ 1.41
HLA-DQB1-204ENST00000399084 KNSTRNQ9Y448 316 aa23.83■■□□□ 1.41
HLA-DQB1-204ENST00000399084 CAMSAP1Q5T5Y3 1602 aa23.83■■□□□ 1.41
HLA-DQB1-204ENST00000399084 PDE3BQ13370 1112 aa23.82■■□□□ 1.4
HLA-DQB1-204ENST00000399084 ADGRF5Q8IZF2 1346 aa23.82■■□□□ 1.4
HLA-DQB1-204ENST00000399084 RAPGEF3O95398 923 aa23.81■■□□□ 1.4
HLA-DQB1-204ENST00000399084 MYO3AQ8NEV4 1616 aa23.81■■□□□ 1.4
HLA-DQB1-204ENST00000399084 CFAP70Q5T0N1 1121 aa23.8■■□□□ 1.4
HLA-DQB1-204ENST00000399084 BCANQ96GW7 911 aa23.8■■□□□ 1.4
HLA-DQB1-204ENST00000399084 PPP6R1Q9UPN7 881 aa23.8■■□□□ 1.4
HLA-DQB1-204ENST00000399084 MROH2AA6NES4 1674 aa23.8■■□□□ 1.4
HLA-DQB1-204ENST00000399084 C14orf93Q9H972 538 aaKnown RBP23.79■■□□□ 1.4
HLA-DQB1-204ENST00000399084 PPP4R2Q9NY27 417 aa23.79■■□□□ 1.4
HLA-DQB1-204ENST00000399084 PPLO60437 1756 aa23.79■■□□□ 1.4
HLA-DQB1-204ENST00000399084 PIK3C2BO00750 1634 aa23.79■■□□□ 1.4
HLA-DQB1-204ENST00000399084 KDM5AP29375 1690 aaKnown RBP23.79■■□□□ 1.4
HLA-DQB1-204ENST00000399084 SLC52A1Q9NWF4 448 aa23.79■■□□□ 1.4
HLA-DQB1-204ENST00000399084 PIK3C2GO75747 1445 aa23.78■■□□□ 1.4
HLA-DQB1-204ENST00000399084 AEBP2Q6ZN18 517 aaPredicted RBP23.78■■□□□ 1.4
HLA-DQB1-204ENST00000399084 CNGB1Q14028 1251 aaPredicted RBP23.77■■□□□ 1.4
HLA-DQB1-204ENST00000399084 RNF123Q5XPI4 1314 aa23.77■■□□□ 1.4
HLA-DQB1-204ENST00000399084 VGFO15240 615 aaPredicted RBP23.76■■□□□ 1.39
HLA-DQB1-204ENST00000399084 ASXL1Q8IXJ9 1541 aa23.75■■□□□ 1.39
HLA-DQB1-204ENST00000399084 ZFYVE9O95405 1425 aa23.75■■□□□ 1.39
HLA-DQB1-204ENST00000399084 PUS7Q96PZ0 661 aaKnown RBP23.75■■□□□ 1.39
HLA-DQB1-204ENST00000399084 REREQ9P2R6 1566 aa23.74■■□□□ 1.39
HLA-DQB1-204ENST00000399084 AMER1Q5JTC6 1135 aaPredicted RBP23.73■■□□□ 1.39
HLA-DQB1-204ENST00000399084 CC2D1BQ5T0F9 858 aaKnown RBP23.73■■□□□ 1.39
HLA-DQB1-204ENST00000399084 TSHZ2Q9NRE2 1034 aa23.72■■□□□ 1.39
HLA-DQB1-204ENST00000399084 DIP2BQ9P265 1576 aa23.71■■□□□ 1.39
HLA-DQB1-204ENST00000399084 ERVK-7P63135 1459 aa23.71■■□□□ 1.39
HLA-DQB1-204ENST00000399084 CENPJQ9HC77 1338 aaPredicted RBP23.71■■□□□ 1.39
HLA-DQB1-204ENST00000399084 CHGAP10645 457 aaKnown RBP23.7■■□□□ 1.39
HLA-DQB1-204ENST00000399084 BLMP54132 1417 aaPredicted RBP23.7■■□□□ 1.38
HLA-DQB1-204ENST00000399084 MYOM1P52179 1685 aa23.69■■□□□ 1.38
HLA-DQB1-204ENST00000399084 AGLP35573 1532 aa23.69■■□□□ 1.38
HLA-DQB1-204ENST00000399084 ADGRB1O14514 1584 aa23.68■■□□□ 1.38
HLA-DQB1-204ENST00000399084 YEATS2Q9ULM3 1422 aa23.68■■□□□ 1.38
HLA-DQB1-204ENST00000399084 FAM69CQ0P6D2 419 aa23.67■■□□□ 1.38
HLA-DQB1-204ENST00000399084 SIGLEC1Q9BZZ2 1709 aa23.66■■□□□ 1.38
HLA-DQB1-204ENST00000399084 PPP2R1AP30153 589 aa23.65■■□□□ 1.38
HLA-DQB1-204ENST00000399084 NEXMIFQ5QGS0 1516 aa23.64■■□□□ 1.37
HLA-DQB1-204ENST00000399084 CFAP65Q6ZU64 1925 aaKnown RBP23.63■■□□□ 1.37
HLA-DQB1-204ENST00000399084 IDI1Q13907 227 aa23.6■■□□□ 1.37
HLA-DQB1-204ENST00000399084 NGEFQ8N5V2 710 aa23.6■■□□□ 1.37
HLA-DQB1-204ENST00000399084 PREX1Q8TCU6 1659 aa23.59■■□□□ 1.37
HLA-DQB1-204ENST00000399084 WDR43Q15061 677 aaKnown RBP eCLIP23.58■■□□□ 1.37
HLA-DQB1-204ENST00000399084 IRX6P78412 446 aaPredicted RBP23.57■■□□□ 1.36
HLA-DQB1-204ENST00000399084 QRICH2Q9H0J4 1663 aa23.56■■□□□ 1.36
HLA-DQB1-204ENST00000399084 TRAK1Q9UPV9 953 aa23.55■■□□□ 1.36
HLA-DQB1-204ENST00000399084 TMEM131LA2VDJ0 1609 aa23.55■■□□□ 1.36
HLA-DQB1-204ENST00000399084 EVC2Q86UK5 1308 aa23.53■■□□□ 1.36
HLA-DQB1-204ENST00000399084 NINLQ9Y2I6 1382 aa23.53■■□□□ 1.36
HLA-DQB1-204ENST00000399084 ADAMTS8Q9UP79 889 aa23.52■■□□□ 1.36
HLA-DQB1-204ENST00000399084 RCAN3Q9UKA8 241 aa23.51■■□□□ 1.35
HLA-DQB1-204ENST00000399084 USP32Q8NFA0 1604 aa23.51■■□□□ 1.35
HLA-DQB1-204ENST00000399084 CARD14Q9BXL6 1004 aa23.5■■□□□ 1.35
HLA-DQB1-204ENST00000399084 ARHGEF28Q8N1W1 1705 aaKnown RBP23.48■■□□□ 1.35
HLA-DQB1-204ENST00000399084 TMEM132EQ6IEE7 984 aa23.47■■□□□ 1.35
HLA-DQB1-204ENST00000399084 POLR3AO14802 1390 aaPredicted RBP23.47■■□□□ 1.35
HLA-DQB1-204ENST00000399084 NSD2O96028 1365 aa23.47■■□□□ 1.35
HLA-DQB1-204ENST00000399084 RRP1P56182 461 aaKnown RBP23.45■■□□□ 1.34
HLA-DQB1-204ENST00000399084 SPATA31D1Q6ZQQ2 1576 aa23.44■■□□□ 1.34
HLA-DQB1-204ENST00000399084 TSPOAP1O95153 1857 aa23.44■■□□□ 1.34
HLA-DQB1-204ENST00000399084 CGNL1Q0VF96 1302 aa23.43■■□□□ 1.34
HLA-DQB1-204ENST00000399084 ANKRD36BQ8N2N9 1353 aa23.42■■□□□ 1.34
HLA-DQB1-204ENST00000399084 NSD3Q9BZ95 1437 aa23.41■■□□□ 1.34
HLA-DQB1-204ENST00000399084 ARHGEF40Q8TER5 1519 aa23.41■■□□□ 1.34
HLA-DQB1-204ENST00000399084 ZNF521Q96K83 1311 aa23.41■■□□□ 1.34
HLA-DQB1-204ENST00000399084 RBM19Q9Y4C8 960 aaKnown RBP23.4■■□□□ 1.34
HLA-DQB1-204ENST00000399084 B4GALNT3Q6L9W6 998 aa23.39■■□□□ 1.34
HLA-DQB1-204ENST00000399084 CCDC136Q96JN2 1154 aa23.39■■□□□ 1.34
HLA-DQB1-204ENST00000399084 SLC12A5Q9H2X9 1139 aa23.39■■□□□ 1.34
HLA-DQB1-204ENST00000399084 MYO5BQ9ULV0 1848 aa23.39■■□□□ 1.33
HLA-DQB1-204ENST00000399084 MORC1Q86VD1 984 aa23.39■■□□□ 1.33
HLA-DQB1-204ENST00000399084 ATAD2Q6PL18 1390 aa23.39■■□□□ 1.33
HLA-DQB1-204ENST00000399084 TULP4Q9NRJ4 1543 aa23.38■■□□□ 1.33
HLA-DQB1-204ENST00000399084 GOLGA2Q08379 1002 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms