RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 CENPJQ9HC77 1338 aaPredicted RBP17.86■□□□□ 0.45
PCDHA11-201ENST00000398640 TOMM22Q9NS69 142 aa17.86■□□□□ 0.45
PCDHA11-201ENST00000398640 DCAF8L1A6NGE4 600 aa17.86■□□□□ 0.45
PCDHA11-201ENST00000398640 CHAF1AQ13111 956 aaPredicted RBP17.86■□□□□ 0.45
PCDHA11-201ENST00000398640 MIA2Q96PC5 1412 aa17.85■□□□□ 0.45
PCDHA11-201ENST00000398640 ST20-MTHFSA0A0A6YYL1 179 aa17.85■□□□□ 0.45
PCDHA11-201ENST00000398640 CCER2I3L3R5 266 aa17.85■□□□□ 0.45
PCDHA11-201ENST00000398640 SUPT6HQ7KZ85 1726 aaKnown RBP17.85■□□□□ 0.45
PCDHA11-201ENST00000398640 SF3B2Q13435 895 aaKnown RBP17.85■□□□□ 0.45
PCDHA11-201ENST00000398640 HSP90B1P14625 803 aaKnown RBP17.84■□□□□ 0.45
PCDHA11-201ENST00000398640 MSNP26038 577 aaKnown RBP17.84■□□□□ 0.45
PCDHA11-201ENST00000398640 NGEFQ8N5V2 710 aa17.84■□□□□ 0.45
PCDHA11-201ENST00000398640 TRIM6-TRIM34B2RNG4 842 aa17.84■□□□□ 0.45
PCDHA11-201ENST00000398640 PDE4CQ08493 712 aa17.83■□□□□ 0.45
PCDHA11-201ENST00000398640 TMEM132EQ6IEE7 984 aa17.83■□□□□ 0.44
PCDHA11-201ENST00000398640 GZF1Q9H116 711 aaPredicted RBP17.83■□□□□ 0.44
PCDHA11-201ENST00000398640 GPATCH3Q96I76 525 aa17.82■□□□□ 0.44
PCDHA11-201ENST00000398640 SMC4Q9NTJ3 1288 aa17.81■□□□□ 0.44
PCDHA11-201ENST00000398640 RCAN3Q9UKA8 241 aa17.81■□□□□ 0.44
PCDHA11-201ENST00000398640 BIVM-ERCC5R4GMW8 1640 aa17.81■□□□□ 0.44
PCDHA11-201ENST00000398640 NUTM2GQ5VZR2 741 aa17.81■□□□□ 0.44
PCDHA11-201ENST00000398640 NOL8Q76FK4 1167 aaKnown RBP17.81■□□□□ 0.44
PCDHA11-201ENST00000398640 TTC5Q8N0Z6 440 aa17.81■□□□□ 0.44
PCDHA11-201ENST00000398640 FBXW7Q969H0 707 aa17.8■□□□□ 0.44
PCDHA11-201ENST00000398640 RWDD1Q9H446 243 aaPredicted RBP17.8■□□□□ 0.44
PCDHA11-201ENST00000398640 ANO8Q9HCE9 1232 aaPredicted RBP17.8■□□□□ 0.44
PCDHA11-201ENST00000398640 CFAP44Q96MT7 982 aa17.8■□□□□ 0.44
PCDHA11-201ENST00000398640 SLC26A8Q96RN1 970 aa17.8■□□□□ 0.44
PCDHA11-201ENST00000398640 FOXD4L1Q9NU39 408 aa17.8■□□□□ 0.44
PCDHA11-201ENST00000398640 CLUAP1Q96AJ1 413 aa17.79■□□□□ 0.44
PCDHA11-201ENST00000398640 SLKQ9H2G2 1235 aaPredicted RBP17.79■□□□□ 0.44
PCDHA11-201ENST00000398640 PANK3Q9H999 370 aa17.79■□□□□ 0.44
PCDHA11-201ENST00000398640 RAD21O60216 631 aa17.79■□□□□ 0.44
PCDHA11-201ENST00000398640 MFAP1P55081 439 aaKnown RBP17.79■□□□□ 0.44
PCDHA11-201ENST00000398640 ARID3AQ99856 593 aa17.79■□□□□ 0.44
PCDHA11-201ENST00000398640 FANCAO15360 1455 aa17.79■□□□□ 0.44
PCDHA11-201ENST00000398640 KIAA2012Q0VF49 1180 aa17.78■□□□□ 0.44
PCDHA11-201ENST00000398640 ASXL2Q76L83 1435 aa17.78■□□□□ 0.44
PCDHA11-201ENST00000398640 RASSF8Q8NHQ8 419 aa17.78■□□□□ 0.44
PCDHA11-201ENST00000398640 RAPGEF4Q8WZA2 1011 aa17.78■□□□□ 0.44
PCDHA11-201ENST00000398640 CCDC141Q6ZP82 1450 aa17.78■□□□□ 0.44
PCDHA11-201ENST00000398640 TEFQ10587 303 aa17.78■□□□□ 0.44
PCDHA11-201ENST00000398640 NLRP2Q9NX02 1062 aa17.78■□□□□ 0.44
PCDHA11-201ENST00000398640 WDR62O43379 1518 aa17.77■□□□□ 0.44
PCDHA11-201ENST00000398640 RBM19Q9Y4C8 960 aaKnown RBP17.77■□□□□ 0.44
PCDHA11-201ENST00000398640 NLRP6P59044 892 aa17.76■□□□□ 0.43
PCDHA11-201ENST00000398640 ABTB2Q8N961 1025 aa17.76■□□□□ 0.43
PCDHA11-201ENST00000398640 DEKP35659 375 aaKnown RBP17.76■□□□□ 0.43
PCDHA11-201ENST00000398640 CABP2Q9NPB3 220 aa17.76■□□□□ 0.43
PCDHA11-201ENST00000398640 CREBRFQ8IUR6 639 aa17.75■□□□□ 0.43
PCDHA11-201ENST00000398640 USP47Q96K76 1375 aa17.75■□□□□ 0.43
PCDHA11-201ENST00000398640 MARCH6O60337 910 aa17.74■□□□□ 0.43
PCDHA11-201ENST00000398640 CEBPAP49715 358 aaPredicted RBP17.74■□□□□ 0.43
PCDHA11-201ENST00000398640 HDAC5Q9UQL6 1122 aa17.74■□□□□ 0.43
PCDHA11-201ENST00000398640 DAPK1P53355 1430 aa17.74■□□□□ 0.43
PCDHA11-201ENST00000398640 L1TD1Q5T7N2 865 aaKnown RBP17.74■□□□□ 0.43
PCDHA11-201ENST00000398640 PRAM1Q96QH2 718 aa17.74■□□□□ 0.43
PCDHA11-201ENST00000398640 STRN4Q9NRL3 753 aa17.74■□□□□ 0.43
PCDHA11-201ENST00000398640 NOC3LQ8WTT2 800 aaKnown RBP17.73■□□□□ 0.43
PCDHA11-201ENST00000398640 RRP7AQ9Y3A4 280 aaKnown RBP17.73■□□□□ 0.43
PCDHA11-201ENST00000398640 EIF4G3O43432 1585 aaKnown RBP17.73■□□□□ 0.43
PCDHA11-201ENST00000398640 PMFBP1Q8TBY8 1022 aa17.73■□□□□ 0.43
PCDHA11-201ENST00000398640 TIAM1Q13009 1591 aa17.72■□□□□ 0.43
PCDHA11-201ENST00000398640 HFM1A2PYH4 1435 aa17.72■□□□□ 0.43
PCDHA11-201ENST00000398640 USP35Q9P2H5 1018 aa17.72■□□□□ 0.43
PCDHA11-201ENST00000398640 RPGRIP1LQ68CZ1 1315 aa17.72■□□□□ 0.43
PCDHA11-201ENST00000398640 GBP4Q96PP9 640 aa17.72■□□□□ 0.43
PCDHA11-201ENST00000398640 PPP6R1Q9UPN7 881 aa17.72■□□□□ 0.43
PCDHA11-201ENST00000398640 TRIM34Q9BYJ4 488 aa17.71■□□□□ 0.43
PCDHA11-201ENST00000398640 ELL2O00472 640 aaPredicted RBP17.71■□□□□ 0.43
PCDHA11-201ENST00000398640 CFAP70Q5T0N1 1121 aa17.71■□□□□ 0.43
PCDHA11-201ENST00000398640 ERBINQ96RT1 1412 aa17.71■□□□□ 0.43
PCDHA11-201ENST00000398640 PCF11O94913 1555 aaKnown RBP17.7■□□□□ 0.42
PCDHA11-201ENST00000398640 HMMRO75330 724 aa17.69■□□□□ 0.42
PCDHA11-201ENST00000398640 EIF2S2P20042 333 aaKnown RBP17.69■□□□□ 0.42
PCDHA11-201ENST00000398640 CAMSAP2Q08AD1 1489 aa17.69■□□□□ 0.42
PCDHA11-201ENST00000398640 FOXD4L5Q5VV16 416 aaPredicted RBP17.69■□□□□ 0.42
PCDHA11-201ENST00000398640 FOXD4L4Q8WXT5 416 aaPredicted RBP17.69■□□□□ 0.42
PCDHA11-201ENST00000398640 HTATSF1O43719 755 aaKnown RBP17.69■□□□□ 0.42
PCDHA11-201ENST00000398640 NECTIN2Q92692 538 aa17.69■□□□□ 0.42
PCDHA11-201ENST00000398640 CTDP1Q9Y5B0 961 aaPredicted RBP17.68■□□□□ 0.42
PCDHA11-201ENST00000398640 DIAPH1O60610 1272 aaKnown RBP17.68■□□□□ 0.42
PCDHA11-201ENST00000398640 NLRP13Q86W25 1043 aa17.67■□□□□ 0.42
PCDHA11-201ENST00000398640 ADAMTS12P58397 1594 aa17.67■□□□□ 0.42
PCDHA11-201ENST00000398640 WDR7Q9Y4E6 1490 aa17.67■□□□□ 0.42
PCDHA11-201ENST00000398640 CWC22Q9HCG8 908 aaKnown RBP17.66■□□□□ 0.42
PCDHA11-201ENST00000398640 SMG6Q86US8 1419 aaKnown RBP17.65■□□□□ 0.42
PCDHA11-201ENST00000398640 TPM4P67936 248 aa17.64■□□□□ 0.41
PCDHA11-201ENST00000398640 SAMD1Q6SPF0 538 aaPredicted RBP17.64■□□□□ 0.41
PCDHA11-201ENST00000398640 NOL10Q9BSC4 688 aaKnown RBP17.64■□□□□ 0.41
PCDHA11-201ENST00000398640 CDK19Q9BWU1 502 aa17.63■□□□□ 0.41
PCDHA11-201ENST00000398640 WWC1Q8IX03 1113 aa17.63■□□□□ 0.41
PCDHA11-201ENST00000398640 RAPGEF6Q8TEU7 1601 aa17.63■□□□□ 0.41
PCDHA11-201ENST00000398640 PPP1R1BQ9UD71 204 aaPredicted RBP17.63■□□□□ 0.41
PCDHA11-201ENST00000398640 RTEL1-TNFRSF6BF6WH68 1400 aa17.63■□□□□ 0.41
PCDHA11-201ENST00000398640 KIAA1107Q9UPP5 1409 aa17.62■□□□□ 0.41
PCDHA11-201ENST00000398640 TOM1L2Q6ZVM7 507 aa17.62■□□□□ 0.41
PCDHA11-201ENST00000398640 VPS37DQ86XT2 251 aa17.62■□□□□ 0.41
PCDHA11-201ENST00000398640 TCEAL9Q9UHQ7 104 aa17.61■□□□□ 0.41
PCDHA11-201ENST00000398640 FBXO31Q5XUX0 539 aaPredicted RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms