RNA–Protein interactions for RNA: ENST00000398399.6

VGLL3-202, Transcript of vestigial like family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VGLL3, Length 10,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3-202ENST00000398399 FOXD4L5Q5VV16 416 aaPredicted RBP16.64■□□□□ 0.25
VGLL3-202ENST00000398399 FOXD4L4Q8WXT5 416 aaPredicted RBP16.64■□□□□ 0.25
VGLL3-202ENST00000398399 TAF7LQ5H9L4 462 aa16.63■□□□□ 0.25
VGLL3-202ENST00000398399 ZRSR2Q15696 482 aaKnown RBP16.63■□□□□ 0.25
VGLL3-202ENST00000398399 ERCC6Q03468 1493 aa16.63■□□□□ 0.25
VGLL3-202ENST00000398399 NUP155O75694 1391 aa16.63■□□□□ 0.25
VGLL3-202ENST00000398399 NFKBIBQ15653 356 aa16.62■□□□□ 0.25
VGLL3-202ENST00000398399 PKD2Q13563 968 aa16.62■□□□□ 0.25
VGLL3-202ENST00000398399 KIAA0754O94854 1291 aa16.62■□□□□ 0.25
VGLL3-202ENST00000398399 INTS3Q68E01 1043 aaKnown RBP16.62■□□□□ 0.25
VGLL3-202ENST00000398399 BICD2Q8TD16 824 aa16.62■□□□□ 0.25
VGLL3-202ENST00000398399 CCDC144AA2RUR9 1427 aa16.62■□□□□ 0.25
VGLL3-202ENST00000398399 CHMP3Q9Y3E7 222 aa16.62■□□□□ 0.25
VGLL3-202ENST00000398399 NINLQ9Y2I6 1382 aa16.62■□□□□ 0.25
VGLL3-202ENST00000398399 CCDC73Q6ZRK6 1079 aa16.62■□□□□ 0.25
VGLL3-202ENST00000398399 USP47Q96K76 1375 aa16.61■□□□□ 0.25
VGLL3-202ENST00000398399 ANKRD45Q5TZF3 282 aa16.61■□□□□ 0.25
VGLL3-202ENST00000398399 SYNE3Q6ZMZ3 975 aa16.61■□□□□ 0.25
VGLL3-202ENST00000398399 CARMIL2Q6F5E8 1435 aa16.61■□□□□ 0.25
VGLL3-202ENST00000398399 GOLGA6L10A6NI86 522 aa16.61■□□□□ 0.25
VGLL3-202ENST00000398399 SENP3Q9H4L4 574 aaPredicted RBP16.61■□□□□ 0.25
VGLL3-202ENST00000398399 MPHOSPH9Q99550 1183 aa16.61■□□□□ 0.25
VGLL3-202ENST00000398399 DEF6Q9H4E7 631 aa16.6■□□□□ 0.25
VGLL3-202ENST00000398399 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.6■□□□□ 0.25
VGLL3-202ENST00000398399 PCMTD1Q96MG8 357 aaPredicted RBP16.6■□□□□ 0.25
VGLL3-202ENST00000398399 OLFM4Q6UX06 510 aa16.6■□□□□ 0.25
VGLL3-202ENST00000398399 PDE4CQ08493 712 aa16.59■□□□□ 0.25
VGLL3-202ENST00000398399 MARCH6O60337 910 aa16.59■□□□□ 0.25
VGLL3-202ENST00000398399 EIF3JO75822 258 aaKnown RBP16.59■□□□□ 0.25
VGLL3-202ENST00000398399 IQCEQ6IPM2 695 aa16.59■□□□□ 0.25
VGLL3-202ENST00000398399 SOGA1O94964 1423 aa16.58■□□□□ 0.25
VGLL3-202ENST00000398399 PDCP20941 246 aa16.58■□□□□ 0.25
VGLL3-202ENST00000398399 TXLNBQ8N3L3 684 aa16.58■□□□□ 0.25
VGLL3-202ENST00000398399 KIF21BO75037 1637 aa16.58■□□□□ 0.25
VGLL3-202ENST00000398399 R3HCC1Q9Y3T6 440 aaKnown RBP16.58■□□□□ 0.24
VGLL3-202ENST00000398399 RILPL2Q969X0 211 aa16.58■□□□□ 0.24
VGLL3-202ENST00000398399 MCM2P49736 904 aa16.57■□□□□ 0.24
VGLL3-202ENST00000398399 C22orf23Q9BZE7 217 aa16.57■□□□□ 0.24
VGLL3-202ENST00000398399 CPLX1O14810 134 aa16.56■□□□□ 0.24
VGLL3-202ENST00000398399 SLC4A10Q6U841 1118 aa16.56■□□□□ 0.24
VGLL3-202ENST00000398399 TCEAL9Q9UHQ7 104 aa16.56■□□□□ 0.24
VGLL3-202ENST00000398399 NEXNQ0ZGT2 675 aa16.55■□□□□ 0.24
VGLL3-202ENST00000398399 CLUAP1Q96AJ1 413 aa16.55■□□□□ 0.24
VGLL3-202ENST00000398399 VPS53Q5VIR6 699 aa16.55■□□□□ 0.24
VGLL3-202ENST00000398399 TSPY26PQ9H489 355 aa16.55■□□□□ 0.24
VGLL3-202ENST00000398399 SMC3Q9UQE7 1217 aa16.55■□□□□ 0.24
VGLL3-202ENST00000398399 SMARCE1Q969G3 411 aa16.54■□□□□ 0.24
VGLL3-202ENST00000398399 PDCL2Q8N4E4 241 aa16.54■□□□□ 0.24
VGLL3-202ENST00000398399 CNTLNQ9NXG0 1405 aa16.54■□□□□ 0.24
VGLL3-202ENST00000398399 ERLIN2O94905 339 aa16.54■□□□□ 0.24
VGLL3-202ENST00000398399 ERLIN1O75477 346 aa16.54■□□□□ 0.24
VGLL3-202ENST00000398399 EPS15P42566 896 aa16.54■□□□□ 0.24
VGLL3-202ENST00000398399 CRBNQ96SW2 442 aa16.54■□□□□ 0.24
VGLL3-202ENST00000398399 AMOTL1Q8IY63 956 aa16.53■□□□□ 0.24
VGLL3-202ENST00000398399 NAP1L1P55209 391 aaKnown RBP16.53■□□□□ 0.24
VGLL3-202ENST00000398399 SAFBQ15424 915 aaKnown RBP eCLIP16.53■□□□□ 0.24
VGLL3-202ENST00000398399 ANO2Q9NQ90 1003 aa16.53■□□□□ 0.24
VGLL3-202ENST00000398399 KINO60870 393 aaKnown RBP16.52■□□□□ 0.24
VGLL3-202ENST00000398399 SMARCA4P51532 1647 aa16.52■□□□□ 0.24
VGLL3-202ENST00000398399 SCAPERQ9BY12 1400 aa16.52■□□□□ 0.24
VGLL3-202ENST00000398399 CCDC146Q8IYE0 955 aa16.52■□□□□ 0.23
VGLL3-202ENST00000398399 TRIM5Q9C035 493 aa16.51■□□□□ 0.23
VGLL3-202ENST00000398399 TRAK2O60296 914 aa16.51■□□□□ 0.23
VGLL3-202ENST00000398399 PIP4K2AP48426 406 aaPredicted RBP16.51■□□□□ 0.23
VGLL3-202ENST00000398399 LUC7LQ9NQ29 371 aaKnown RBP16.51■□□□□ 0.23
VGLL3-202ENST00000398399 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.51■□□□□ 0.23
VGLL3-202ENST00000398399 PRKRIP1Q9H875 184 aaPredicted RBP16.51■□□□□ 0.23
VGLL3-202ENST00000398399 DYDC1Q8WWB3 177 aa16.51■□□□□ 0.23
VGLL3-202ENST00000398399 ERC2O15083 957 aa16.5■□□□□ 0.23
VGLL3-202ENST00000398399 CT47A1Q5JQC4 288 aaPredicted RBP16.5■□□□□ 0.23
VGLL3-202ENST00000398399 AXDND1Q5T1B0 1012 aaPredicted RBP16.5■□□□□ 0.23
VGLL3-202ENST00000398399 TRDNQ13061 729 aa16.5■□□□□ 0.23
VGLL3-202ENST00000398399 SLC4A3P48751 1232 aa16.5■□□□□ 0.23
VGLL3-202ENST00000398399 RABEP1Q15276 862 aa16.5■□□□□ 0.23
VGLL3-202ENST00000398399 TOMM22Q9NS69 142 aa16.5■□□□□ 0.23
VGLL3-202ENST00000398399 FOXD4L6Q3SYB3 417 aaPredicted RBP16.5■□□□□ 0.23
VGLL3-202ENST00000398399 ODF2Q5BJF6 829 aa16.5■□□□□ 0.23
VGLL3-202ENST00000398399 FOXD4L3Q6VB84 417 aaPredicted RBP16.5■□□□□ 0.23
VGLL3-202ENST00000398399 BRMS1Q9HCU9 246 aa16.5■□□□□ 0.23
VGLL3-202ENST00000398399 PSMA5P28066 241 aa16.49■□□□□ 0.23
VGLL3-202ENST00000398399 CT47B1P0C2W7 299 aaPredicted RBP16.49■□□□□ 0.23
VGLL3-202ENST00000398399 CCDC88BA6NC98 1476 aa16.49■□□□□ 0.23
VGLL3-202ENST00000398399 WWC1Q8IX03 1113 aa16.49■□□□□ 0.23
VGLL3-202ENST00000398399 DHX57Q6P158 1386 aaKnown RBP16.49■□□□□ 0.23
VGLL3-202ENST00000398399 CFAP65Q6ZU64 1925 aaKnown RBP16.49■□□□□ 0.23
VGLL3-202ENST00000398399 DZIP1LQ8IYY4 767 aaKnown RBP16.48■□□□□ 0.23
VGLL3-202ENST00000398399 PDIA4P13667 645 aaKnown RBP16.48■□□□□ 0.23
VGLL3-202ENST00000398399 VPS37CA5D8V6 355 aaPredicted RBP16.48■□□□□ 0.23
VGLL3-202ENST00000398399 RSPH4AQ5TD94 716 aa16.48■□□□□ 0.23
VGLL3-202ENST00000398399 EXOC6Q8TAG9 804 aa16.48■□□□□ 0.23
VGLL3-202ENST00000398399 KIF2AO00139 706 aaPredicted RBP16.48■□□□□ 0.23
VGLL3-202ENST00000398399 CCDC192P0DO97 292 aa16.48■□□□□ 0.23
VGLL3-202ENST00000398399 HSP90AB3PQ58FF7 597 aa16.48■□□□□ 0.23
VGLL3-202ENST00000398399 FAM107BQ9H098 131 aa16.48■□□□□ 0.23
VGLL3-202ENST00000398399 BRD4O60885 1362 aaPredicted RBP16.47■□□□□ 0.23
VGLL3-202ENST00000398399 UQCRHLA0A096LP55 91 aa16.47■□□□□ 0.23
VGLL3-202ENST00000398399 UQCRHP07919 91 aa16.47■□□□□ 0.23
VGLL3-202ENST00000398399 DDX11Q96FC9 970 aa16.47■□□□□ 0.23
VGLL3-202ENST00000398399 CCDC112Q8NEF3 446 aa16.46■□□□□ 0.23
VGLL3-202ENST00000398399 PLEKHH2Q8IVE3 1493 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms