RNA–Protein interactions for RNA: ENST00000398193.8

RGPD1-201, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-201ENST00000398193 SBNO2Q9Y2G9 1366 aa10.21□□□□□ -0.78
RGPD1-201ENST00000398193 CDCA8Q53HL2 280 aa10.2□□□□□ -0.78
RGPD1-201ENST00000398193 TMEM131LA2VDJ0 1609 aa10.2□□□□□ -0.78
RGPD1-201ENST00000398193 ERVK-7P63135 1459 aa10.19□□□□□ -0.78
RGPD1-201ENST00000398193 TSPOAP1O95153 1857 aa10.19□□□□□ -0.78
RGPD1-201ENST00000398193 SLC52A1Q9NWF4 448 aa10.19□□□□□ -0.78
RGPD1-201ENST00000398193 C11orf95C9JLR9 678 aaPredicted RBP10.18□□□□□ -0.78
RGPD1-201ENST00000398193 CLTCQ00610 1675 aaKnown RBP10.18□□□□□ -0.78
RGPD1-201ENST00000398193 KDM2AQ9Y2K7 1162 aa10.17□□□□□ -0.78
RGPD1-201ENST00000398193 RALBP1Q15311 655 aa10.17□□□□□ -0.78
RGPD1-201ENST00000398193 ADGRB1O14514 1584 aa10.17□□□□□ -0.78
RGPD1-201ENST00000398193 TMF1P82094 1093 aa10.17□□□□□ -0.78
RGPD1-201ENST00000398193 HIRIP3Q9BW71 556 aaPredicted RBP10.17□□□□□ -0.78
RGPD1-201ENST00000398193 RAPGEF3O95398 923 aa10.17□□□□□ -0.78
RGPD1-201ENST00000398193 PRKRIP1Q9H875 184 aaPredicted RBP10.17□□□□□ -0.78
RGPD1-201ENST00000398193 ZNF326Q5BKZ1 582 aaKnown RBP10.16□□□□□ -0.78
RGPD1-201ENST00000398193 USP32Q8NFA0 1604 aa10.16□□□□□ -0.78
RGPD1-201ENST00000398193 PUS7Q96PZ0 661 aaKnown RBP10.16□□□□□ -0.78
RGPD1-201ENST00000398193 MYOM1P52179 1685 aa10.16□□□□□ -0.78
RGPD1-201ENST00000398193 NPC1L1Q9UHC9 1359 aa10.15□□□□□ -0.78
RGPD1-201ENST00000398193 ST20-MTHFSA0A0A6YYL1 179 aa10.15□□□□□ -0.78
RGPD1-201ENST00000398193 TESK2Q96S53 571 aa10.15□□□□□ -0.78
RGPD1-201ENST00000398193 RGL3Q3MIN7 710 aa10.14□□□□□ -0.79
RGPD1-201ENST00000398193 QRICH2Q9H0J4 1663 aa10.14□□□□□ -0.79
RGPD1-201ENST00000398193 BRD4O60885 1362 aaPredicted RBP10.14□□□□□ -0.79
RGPD1-201ENST00000398193 DLC1Q96QB1 1528 aa10.13□□□□□ -0.79
RGPD1-201ENST00000398193 C14orf93Q9H972 538 aaKnown RBP10.13□□□□□ -0.79
RGPD1-201ENST00000398193 ARHGEF28Q8N1W1 1705 aaKnown RBP10.13□□□□□ -0.79
RGPD1-201ENST00000398193 PARD3Q8TEW0 1356 aa10.12□□□□□ -0.79
RGPD1-201ENST00000398193 NBPF1Q3BBV0 1214 aa10.12□□□□□ -0.79
RGPD1-201ENST00000398193 DISP3Q9P2K9 1392 aa10.12□□□□□ -0.79
RGPD1-201ENST00000398193 SCAF1Q9H7N4 1312 aaKnown RBP10.12□□□□□ -0.79
RGPD1-201ENST00000398193 VGFO15240 615 aaPredicted RBP10.12□□□□□ -0.79
RGPD1-201ENST00000398193 GGT6Q6P531 493 aa10.12□□□□□ -0.79
RGPD1-201ENST00000398193 YTHDC1Q96MU7 727 aaKnown RBP10.11□□□□□ -0.79
RGPD1-201ENST00000398193 KNDC1Q76NI1 1749 aa10.11□□□□□ -0.79
RGPD1-201ENST00000398193 MYBBP1AQ9BQG0 1328 aaKnown RBP10.11□□□□□ -0.79
RGPD1-201ENST00000398193 NINLQ9Y2I6 1382 aa10.1□□□□□ -0.79
RGPD1-201ENST00000398193 ASXL1Q8IXJ9 1541 aa10.09□□□□□ -0.79
RGPD1-201ENST00000398193 SETD1AO15047 1707 aaKnown RBP10.09□□□□□ -0.79
RGPD1-201ENST00000398193 ADGRF5Q8IZF2 1346 aa10.08□□□□□ -0.8
RGPD1-201ENST00000398193 MYO5BQ9ULV0 1848 aa10.08□□□□□ -0.8
RGPD1-201ENST00000398193 NLRP1Q9C000 1473 aa10.08□□□□□ -0.8
RGPD1-201ENST00000398193 A2ML1A8K2U0 1454 aa10.07□□□□□ -0.8
RGPD1-201ENST00000398193 LRPPRCP42704 1394 aaKnown RBP10.07□□□□□ -0.8
RGPD1-201ENST00000398193 ALKQ9UM73 1620 aa10.06□□□□□ -0.8
RGPD1-201ENST00000398193 ZBED9Q6R2W3 1325 aa10.06□□□□□ -0.8
RGPD1-201ENST00000398193 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.06□□□□□ -0.8
RGPD1-201ENST00000398193 PER1O15534 1290 aaPredicted RBP10.05□□□□□ -0.8
RGPD1-201ENST00000398193 GTF3C3Q9Y5Q9 886 aa10.05□□□□□ -0.8
RGPD1-201ENST00000398193 UBR1Q8IWV7 1749 aa10.05□□□□□ -0.8
RGPD1-201ENST00000398193 DIP2AQ14689 1571 aa10.05□□□□□ -0.8
RGPD1-201ENST00000398193 CENPJQ9HC77 1338 aaPredicted RBP10.04□□□□□ -0.8
RGPD1-201ENST00000398193 HDGFP51858 240 aaKnown RBP10.04□□□□□ -0.8
RGPD1-201ENST00000398193 MRS2Q9HD23 443 aa10.04□□□□□ -0.8
RGPD1-201ENST00000398193 NSD2O96028 1365 aa10.03□□□□□ -0.8
RGPD1-201ENST00000398193 NLRP13Q86W25 1043 aa10.03□□□□□ -0.8
RGPD1-201ENST00000398193 RIMS2Q9UQ26 1411 aa10.03□□□□□ -0.8
RGPD1-201ENST00000398193 FER1L4A9Z1Z3 1794 aa10.03□□□□□ -0.8
RGPD1-201ENST00000398193 NRXN3Q9Y4C0 1643 aa10.03□□□□□ -0.8
RGPD1-201ENST00000398193 PTPRMP28827 1452 aa10.03□□□□□ -0.8
RGPD1-201ENST00000398193 IDI1Q13907 227 aa10.03□□□□□ -0.8
RGPD1-201ENST00000398193 CFAP70Q5T0N1 1121 aa10.03□□□□□ -0.8
RGPD1-201ENST00000398193 SIRT1Q96EB6 747 aa10.03□□□□□ -0.8
RGPD1-201ENST00000398193 ZMYM3Q14202 1370 aa10.02□□□□□ -0.8
RGPD1-201ENST00000398193 CPS1P31327 1500 aa10.02□□□□□ -0.8
RGPD1-201ENST00000398193 BLMP54132 1417 aaPredicted RBP10.02□□□□□ -0.81
RGPD1-201ENST00000398193 ERICH6BQ5W0A0 696 aa10.02□□□□□ -0.81
RGPD1-201ENST00000398193 TNRQ92752 1358 aa10.02□□□□□ -0.81
RGPD1-201ENST00000398193 TULP4Q9NRJ4 1543 aa10.02□□□□□ -0.81
RGPD1-201ENST00000398193 ANKRD26Q9UPS8 1709 aa10.01□□□□□ -0.81
RGPD1-201ENST00000398193 SLIT1O75093 1534 aa10.01□□□□□ -0.81
RGPD1-201ENST00000398193 C3P01024 1663 aa10.01□□□□□ -0.81
RGPD1-201ENST00000398193 MED14O60244 1454 aa10.01□□□□□ -0.81
RGPD1-201ENST00000398193 YTHDC2Q9H6S0 1430 aaKnown RBP10.01□□□□□ -0.81
RGPD1-201ENST00000398193 TECPR2O15040 1411 aa10□□□□□ -0.81
RGPD1-201ENST00000398193 PANK3Q9H999 370 aa10□□□□□ -0.81
RGPD1-201ENST00000398193 ADGRB2O60241 1585 aa10□□□□□ -0.81
RGPD1-201ENST00000398193 SMG6Q86US8 1419 aaKnown RBP10□□□□□ -0.81
RGPD1-201ENST00000398193 FAM135BQ49AJ0 1406 aa10□□□□□ -0.81
RGPD1-201ENST00000398193 EVC2Q86UK5 1308 aa9.99□□□□□ -0.81
RGPD1-201ENST00000398193 ZNF142P52746 1687 aaPredicted RBP9.99□□□□□ -0.81
RGPD1-201ENST00000398193 PNISRQ8TF01 805 aaKnown RBP9.99□□□□□ -0.81
RGPD1-201ENST00000398193 KNSTRNQ9Y448 316 aa9.99□□□□□ -0.81
RGPD1-201ENST00000398193 ESF1Q9H501 851 aaKnown RBP9.99□□□□□ -0.81
RGPD1-201ENST00000398193 CHGAP10645 457 aaKnown RBP9.98□□□□□ -0.81
RGPD1-201ENST00000398193 ARHGAP23Q9P227 1491 aa9.98□□□□□ -0.81
RGPD1-201ENST00000398193 ATAD2Q6PL18 1390 aa9.98□□□□□ -0.81
RGPD1-201ENST00000398193 ABCC11Q96J66 1382 aa9.97□□□□□ -0.81
RGPD1-201ENST00000398193 TMC1Q8TDI8 760 aa9.97□□□□□ -0.81
RGPD1-201ENST00000398193 RIMS1Q86UR5 1692 aaKnown RBP9.97□□□□□ -0.81
RGPD1-201ENST00000398193 CFAP65Q6ZU64 1925 aaKnown RBP9.97□□□□□ -0.81
RGPD1-201ENST00000398193 ANKRD36BQ8N2N9 1353 aa9.97□□□□□ -0.81
RGPD1-201ENST00000398193 PLEKHG1Q9ULL1 1385 aa9.97□□□□□ -0.81
RGPD1-201ENST00000398193 AMER1Q5JTC6 1135 aaPredicted RBP9.96□□□□□ -0.81
RGPD1-201ENST00000398193 HNRNPUQ00839 825 aaKnown RBP eCLIP9.96□□□□□ -0.81
RGPD1-201ENST00000398193 POLR3GLQ9BT43 218 aa9.96□□□□□ -0.81
RGPD1-201ENST00000398193 NGEFQ8N5V2 710 aa9.96□□□□□ -0.81
RGPD1-201ENST00000398193 ATP7BP35670 1465 aa9.96□□□□□ -0.82
RGPD1-201ENST00000398193 PDE3BQ13370 1112 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms