RNA–Protein interactions for RNA: ENST00000398005.3

HMGN2P39-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 39, humanhuman

BASIC

Gene HMGN2P39, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P39-201ENST00000398005 SKIV2LQ15477 1246 aaKnown RBP3.33□□□□□ -1.88
HMGN2P39-201ENST00000398005 WWC1Q8IX03 1113 aa3.33□□□□□ -1.88
HMGN2P39-201ENST00000398005 PLPP6Q8IY26 295 aa3.33□□□□□ -1.88
HMGN2P39-201ENST00000398005 GPHNQ9NQX3 736 aaPredicted RBP3.33□□□□□ -1.88
HMGN2P39-201ENST00000398005 USP35Q9P2H5 1018 aa3.33□□□□□ -1.88
HMGN2P39-201ENST00000398005 COG6Q9Y2V7 657 aa3.33□□□□□ -1.88
HMGN2P39-201ENST00000398005 SPDYE5A6NIY4 337 aa3.32□□□□□ -1.88
HMGN2P39-201ENST00000398005 PROCA1Q8NCQ7 364 aaPredicted RBP3.32□□□□□ -1.88
HMGN2P39-201ENST00000398005 KCTD12Q96CX2 325 aaKnown RBP3.32□□□□□ -1.88
HMGN2P39-201ENST00000398005 CALR3Q96L12 384 aaKnown RBP3.32□□□□□ -1.88
HMGN2P39-201ENST00000398005 POLR3EQ9NVU0 708 aa3.32□□□□□ -1.88
HMGN2P39-201ENST00000398005 CLCN1P35523 988 aa3.31□□□□□ -1.88
HMGN2P39-201ENST00000398005 MAP3K9P80192 1104 aa3.31□□□□□ -1.88
HMGN2P39-201ENST00000398005 MYT1Q01538 1121 aa3.31□□□□□ -1.88
HMGN2P39-201ENST00000398005 KCNA1Q09470 495 aa3.31□□□□□ -1.88
HMGN2P39-201ENST00000398005 PPP4R3BQ5MIZ7 849 aa3.31□□□□□ -1.88
HMGN2P39-201ENST00000398005 BHMG1C9JSJ3 638 aaPredicted RBP3.3□□□□□ -1.88
HMGN2P39-201ENST00000398005 BRD1O95696 1058 aa3.3□□□□□ -1.88
HMGN2P39-201ENST00000398005 CSB-PGBD3P0DP91 1061 aa3.3□□□□□ -1.88
HMGN2P39-201ENST00000398005 OSBPP22059 807 aa3.3□□□□□ -1.88
HMGN2P39-201ENST00000398005 MDM2Q00987 491 aaPredicted RBP3.3□□□□□ -1.88
HMGN2P39-201ENST00000398005 CCDC27Q2M243 656 aa3.3□□□□□ -1.88
HMGN2P39-201ENST00000398005 OXER1Q8TDS5 423 aa3.3□□□□□ -1.88
HMGN2P39-201ENST00000398005 KCNK17Q96T54 332 aa3.3□□□□□ -1.88
HMGN2P39-201ENST00000398005 BEGAINQ9BUH8 593 aa3.3□□□□□ -1.88
HMGN2P39-201ENST00000398005 REPIN1Q9BWE0 567 aaKnown RBP3.3□□□□□ -1.88
HMGN2P39-201ENST00000398005 GPCPD1Q9NPB8 672 aa3.3□□□□□ -1.88
HMGN2P39-201ENST00000398005 SNRKQ9NRH2 765 aa3.3□□□□□ -1.88
HMGN2P39-201ENST00000398005 VPS9D1Q9Y2B5 631 aa3.3□□□□□ -1.88
HMGN2P39-201ENST00000398005 TBC1D12O60347 775 aa3.29□□□□□ -1.88
HMGN2P39-201ENST00000398005 SSTR3P32745 418 aaPredicted RBP3.29□□□□□ -1.88
HMGN2P39-201ENST00000398005 ABL2P42684 1182 aa3.29□□□□□ -1.88
HMGN2P39-201ENST00000398005 PTPN5P54829 565 aa3.29□□□□□ -1.88
HMGN2P39-201ENST00000398005 DDX12PQ92771 950 aa3.29□□□□□ -1.88
HMGN2P39-201ENST00000398005 GLMNQ92990 594 aa3.29□□□□□ -1.88
HMGN2P39-201ENST00000398005 GDPD2Q9HCC8 539 aa3.29□□□□□ -1.88
HMGN2P39-201ENST00000398005 RFX1P22670 979 aa3.28□□□□□ -1.88
HMGN2P39-201ENST00000398005 RFC5P40937 340 aa3.28□□□□□ -1.88
HMGN2P39-201ENST00000398005 PTGDRQ13258 359 aa3.28□□□□□ -1.88
HMGN2P39-201ENST00000398005 BANK1Q8NDB2 785 aa3.28□□□□□ -1.88
HMGN2P39-201ENST00000398005 UPF1Q92900 1129 aaKnown RBP eCLIP3.28□□□□□ -1.88
HMGN2P39-201ENST00000398005 PBXIP1Q96AQ6 731 aa3.28□□□□□ -1.88
HMGN2P39-201ENST00000398005 PUS7Q96PZ0 661 aaKnown RBP3.28□□□□□ -1.88
HMGN2P39-201ENST00000398005 SLC4A5Q9BY07 1137 aa3.28□□□□□ -1.88
HMGN2P39-201ENST00000398005 BCL2L12Q9HB09 334 aa3.28□□□□□ -1.88
HMGN2P39-201ENST00000398005 PRM3Q9NNZ6 103 aa3.28□□□□□ -1.88
HMGN2P39-201ENST00000398005 AMOTL2Q9Y2J4 779 aa3.28□□□□□ -1.88
HMGN2P39-201ENST00000398005 IVNS1ABPQ9Y6Y0 642 aa3.28□□□□□ -1.88
HMGN2P39-201ENST00000398005 POM121CA8CG34 1229 aa3.27□□□□□ -1.89
HMGN2P39-201ENST00000398005 CLK2P49760 499 aaKnown RBP3.27□□□□□ -1.89
HMGN2P39-201ENST00000398005 RSPH4AQ5TD94 716 aa3.27□□□□□ -1.89
HMGN2P39-201ENST00000398005 IFFO2Q5TF58 517 aa3.27□□□□□ -1.89
HMGN2P39-201ENST00000398005 MYSM1Q5VVJ2 828 aa3.27□□□□□ -1.89
HMGN2P39-201ENST00000398005 THSD4Q6ZMP0 1018 aa3.27□□□□□ -1.89
HMGN2P39-201ENST00000398005 ZNF454Q8N9F8 522 aa3.27□□□□□ -1.89
HMGN2P39-201ENST00000398005 STAC3Q96MF2 364 aa3.27□□□□□ -1.89
HMGN2P39-201ENST00000398005 ZBED2Q9BTP6 218 aa3.27□□□□□ -1.89
HMGN2P39-201ENST00000398005 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.27□□□□□ -1.89
HMGN2P39-201ENST00000398005 USTQ9Y2C2 406 aa3.27□□□□□ -1.89
HMGN2P39-201ENST00000398005 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.26□□□□□ -1.89
HMGN2P39-201ENST00000398005 FOSBP53539 338 aa3.26□□□□□ -1.89
HMGN2P39-201ENST00000398005 TMEM259Q4ZIN3 620 aa3.26□□□□□ -1.89
HMGN2P39-201ENST00000398005 TMUB1Q9BVT8 246 aa3.26□□□□□ -1.89
HMGN2P39-201ENST00000398005 ANO8Q9HCE9 1232 aaPredicted RBP3.26□□□□□ -1.89
HMGN2P39-201ENST00000398005 TTBK1Q5TCY1 1321 aaPredicted RBP3.25□□□□□ -1.89
HMGN2P39-201ENST00000398005 A0A0G2JS52 829 aa3.25□□□□□ -1.89
HMGN2P39-201ENST00000398005 CARNS1A5YM72 827 aa3.25□□□□□ -1.89
HMGN2P39-201ENST00000398005 EIF5BO60841 1220 aaKnown RBP3.25□□□□□ -1.89
HMGN2P39-201ENST00000398005 RGS20O76081 388 aa3.25□□□□□ -1.89
HMGN2P39-201ENST00000398005 SND1Q7KZF4 910 aaKnown RBP eCLIP3.25□□□□□ -1.89
HMGN2P39-201ENST00000398005 MTMR14Q8NCE2 650 aa3.25□□□□□ -1.89
HMGN2P39-201ENST00000398005 KCNH8Q96L42 1107 aa3.25□□□□□ -1.89
HMGN2P39-201ENST00000398005 FAM217BQ9NTX9 383 aaPredicted RBP3.25□□□□□ -1.89
HMGN2P39-201ENST00000398005 PTPREP23469 700 aa3.24□□□□□ -1.89
HMGN2P39-201ENST00000398005 PRIM1P49642 420 aaKnown RBP3.24□□□□□ -1.89
HMGN2P39-201ENST00000398005 HDGFL1Q5TGJ6 251 aa3.24□□□□□ -1.89
HMGN2P39-201ENST00000398005 MRPL50Q8N5N7 158 aaKnown RBP3.24□□□□□ -1.89
HMGN2P39-201ENST00000398005 WNT2BQ93097 391 aa3.24□□□□□ -1.89
HMGN2P39-201ENST00000398005 PHOX2BQ99453 314 aa3.24□□□□□ -1.89
HMGN2P39-201ENST00000398005 TBC1D2Q9BYX2 928 aa3.24□□□□□ -1.89
HMGN2P39-201ENST00000398005 ADAM33Q9BZ11 813 aa3.24□□□□□ -1.89
HMGN2P39-201ENST00000398005 TBC1D2BQ9UPU7 963 aa3.24□□□□□ -1.89
HMGN2P39-201ENST00000398005 EVI5O60447 810 aa3.23□□□□□ -1.89
HMGN2P39-201ENST00000398005 DIXDC1Q155Q3 683 aa3.23□□□□□ -1.89
HMGN2P39-201ENST00000398005 NLRP7Q8WX94 980 aa3.23□□□□□ -1.89
HMGN2P39-201ENST00000398005 ZDHHC16Q969W1 377 aa3.23□□□□□ -1.89
HMGN2P39-201ENST00000398005 JPH4Q96JJ6 628 aa3.23□□□□□ -1.89
HMGN2P39-201ENST00000398005 IRX2Q9BZI1 471 aaPredicted RBP3.23□□□□□ -1.89
HMGN2P39-201ENST00000398005 VRTNQ9H8Y1 702 aa3.23□□□□□ -1.89
HMGN2P39-201ENST00000398005 UNCXA6NJT0 531 aa3.22□□□□□ -1.89
HMGN2P39-201ENST00000398005 GOLGA8CPA6NN73 597 aa3.22□□□□□ -1.89
HMGN2P39-201ENST00000398005 MAP3K7O43318 606 aa3.22□□□□□ -1.89
HMGN2P39-201ENST00000398005 AP1G2O75843 785 aa3.22□□□□□ -1.89
HMGN2P39-201ENST00000398005 CSPP1Q1MSJ5 1256 aa3.22□□□□□ -1.89
HMGN2P39-201ENST00000398005 PROX2Q3B8N5 592 aa3.22□□□□□ -1.89
HMGN2P39-201ENST00000398005 CFAP70Q5T0N1 1121 aa3.22□□□□□ -1.89
HMGN2P39-201ENST00000398005 FBXO31Q5XUX0 539 aaPredicted RBP3.22□□□□□ -1.89
HMGN2P39-201ENST00000398005 PPP2R2DQ66LE6 453 aa3.22□□□□□ -1.89
HMGN2P39-201ENST00000398005 RIC3Q7Z5B4 369 aa3.22□□□□□ -1.89
HMGN2P39-201ENST00000398005 FAM177A1Q8N128 213 aaPredicted RBP3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms