RNA–Protein interactions for RNA: ENST00000398005.3

HMGN2P39-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 39, humanhuman

BASIC

Gene HMGN2P39, Length 273 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P39-201ENST00000398005 SKIV2LQ15477 1246 aaKnown RBP3.33□□□□□ -1.88
HMGN2P39-201ENST00000398005 WWC1Q8IX03 1113 aa3.33□□□□□ -1.88
HMGN2P39-201ENST00000398005 PLPP6Q8IY26 295 aa3.33□□□□□ -1.88
HMGN2P39-201ENST00000398005 GPHNQ9NQX3 736 aaPredicted RBP3.33□□□□□ -1.88
HMGN2P39-201ENST00000398005 USP35Q9P2H5 1018 aa3.33□□□□□ -1.88
HMGN2P39-201ENST00000398005 COG6Q9Y2V7 657 aa3.33□□□□□ -1.88
HMGN2P39-201ENST00000398005 SPDYE5A6NIY4 337 aa3.32□□□□□ -1.88
HMGN2P39-201ENST00000398005 PROCA1Q8NCQ7 364 aaPredicted RBP3.32□□□□□ -1.88
HMGN2P39-201ENST00000398005 KCTD12Q96CX2 325 aaKnown RBP3.32□□□□□ -1.88
HMGN2P39-201ENST00000398005 CALR3Q96L12 384 aaKnown RBP3.32□□□□□ -1.88
HMGN2P39-201ENST00000398005 POLR3EQ9NVU0 708 aa3.32□□□□□ -1.88
HMGN2P39-201ENST00000398005 CLCN1P35523 988 aa3.31□□□□□ -1.88
HMGN2P39-201ENST00000398005 MAP3K9P80192 1104 aa3.31□□□□□ -1.88
HMGN2P39-201ENST00000398005 MYT1Q01538 1121 aa3.31□□□□□ -1.88
HMGN2P39-201ENST00000398005 KCNA1Q09470 495 aa3.31□□□□□ -1.88
HMGN2P39-201ENST00000398005 PPP4R3BQ5MIZ7 849 aa3.31□□□□□ -1.88
HMGN2P39-201ENST00000398005 BHMG1C9JSJ3 638 aaPredicted RBP3.3□□□□□ -1.88
HMGN2P39-201ENST00000398005 BRD1O95696 1058 aa3.3□□□□□ -1.88
HMGN2P39-201ENST00000398005 CSB-PGBD3P0DP91 1061 aa3.3□□□□□ -1.88
HMGN2P39-201ENST00000398005 OSBPP22059 807 aa3.3□□□□□ -1.88
HMGN2P39-201ENST00000398005 MDM2Q00987 491 aaPredicted RBP3.3□□□□□ -1.88
HMGN2P39-201ENST00000398005 CCDC27Q2M243 656 aa3.3□□□□□ -1.88
HMGN2P39-201ENST00000398005 OXER1Q8TDS5 423 aa3.3□□□□□ -1.88
HMGN2P39-201ENST00000398005 KCNK17Q96T54 332 aa3.3□□□□□ -1.88
HMGN2P39-201ENST00000398005 BEGAINQ9BUH8 593 aa3.3□□□□□ -1.88
HMGN2P39-201ENST00000398005 REPIN1Q9BWE0 567 aaKnown RBP3.3□□□□□ -1.88
HMGN2P39-201ENST00000398005 GPCPD1Q9NPB8 672 aa3.3□□□□□ -1.88
HMGN2P39-201ENST00000398005 SNRKQ9NRH2 765 aa3.3□□□□□ -1.88
HMGN2P39-201ENST00000398005 VPS9D1Q9Y2B5 631 aa3.3□□□□□ -1.88
HMGN2P39-201ENST00000398005 TBC1D12O60347 775 aa3.29□□□□□ -1.88
HMGN2P39-201ENST00000398005 SSTR3P32745 418 aaPredicted RBP3.29□□□□□ -1.88
HMGN2P39-201ENST00000398005 ABL2P42684 1182 aa3.29□□□□□ -1.88
HMGN2P39-201ENST00000398005 PTPN5P54829 565 aa3.29□□□□□ -1.88
HMGN2P39-201ENST00000398005 DDX12PQ92771 950 aa3.29□□□□□ -1.88
HMGN2P39-201ENST00000398005 GLMNQ92990 594 aa3.29□□□□□ -1.88
HMGN2P39-201ENST00000398005 GDPD2Q9HCC8 539 aa3.29□□□□□ -1.88
HMGN2P39-201ENST00000398005 RFX1P22670 979 aa3.28□□□□□ -1.88
HMGN2P39-201ENST00000398005 RFC5P40937 340 aa3.28□□□□□ -1.88
HMGN2P39-201ENST00000398005 PTGDRQ13258 359 aa3.28□□□□□ -1.88
HMGN2P39-201ENST00000398005 BANK1Q8NDB2 785 aa3.28□□□□□ -1.88
HMGN2P39-201ENST00000398005 UPF1Q92900 1129 aaKnown RBP eCLIP3.28□□□□□ -1.88
HMGN2P39-201ENST00000398005 PBXIP1Q96AQ6 731 aa3.28□□□□□ -1.88
HMGN2P39-201ENST00000398005 PUS7Q96PZ0 661 aaKnown RBP3.28□□□□□ -1.88
HMGN2P39-201ENST00000398005 SLC4A5Q9BY07 1137 aa3.28□□□□□ -1.88
HMGN2P39-201ENST00000398005 BCL2L12Q9HB09 334 aa3.28□□□□□ -1.88
HMGN2P39-201ENST00000398005 PRM3Q9NNZ6 103 aa3.28□□□□□ -1.88
HMGN2P39-201ENST00000398005 AMOTL2Q9Y2J4 779 aa3.28□□□□□ -1.88
HMGN2P39-201ENST00000398005 IVNS1ABPQ9Y6Y0 642 aa3.28□□□□□ -1.88
HMGN2P39-201ENST00000398005 POM121CA8CG34 1229 aa3.27□□□□□ -1.89
HMGN2P39-201ENST00000398005 CLK2P49760 499 aaKnown RBP3.27□□□□□ -1.89
HMGN2P39-201ENST00000398005 RSPH4AQ5TD94 716 aa3.27□□□□□ -1.89
HMGN2P39-201ENST00000398005 IFFO2Q5TF58 517 aa3.27□□□□□ -1.89
HMGN2P39-201ENST00000398005 MYSM1Q5VVJ2 828 aa3.27□□□□□ -1.89
HMGN2P39-201ENST00000398005 THSD4Q6ZMP0 1018 aa3.27□□□□□ -1.89
HMGN2P39-201ENST00000398005 ZNF454Q8N9F8 522 aa3.27□□□□□ -1.89
HMGN2P39-201ENST00000398005 STAC3Q96MF2 364 aa3.27□□□□□ -1.89
HMGN2P39-201ENST00000398005 ZBED2Q9BTP6 218 aa3.27□□□□□ -1.89
HMGN2P39-201ENST00000398005 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.27□□□□□ -1.89
HMGN2P39-201ENST00000398005 USTQ9Y2C2 406 aa3.27□□□□□ -1.89
HMGN2P39-201ENST00000398005 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.26□□□□□ -1.89
HMGN2P39-201ENST00000398005 FOSBP53539 338 aa3.26□□□□□ -1.89
HMGN2P39-201ENST00000398005 TMEM259Q4ZIN3 620 aa3.26□□□□□ -1.89
HMGN2P39-201ENST00000398005 TMUB1Q9BVT8 246 aa3.26□□□□□ -1.89
HMGN2P39-201ENST00000398005 ANO8Q9HCE9 1232 aaPredicted RBP3.26□□□□□ -1.89
HMGN2P39-201ENST00000398005 TTBK1Q5TCY1 1321 aaPredicted RBP3.25□□□□□ -1.89
HMGN2P39-201ENST00000398005 A0A0G2JS52 829 aa3.25□□□□□ -1.89
HMGN2P39-201ENST00000398005 CARNS1A5YM72 827 aa3.25□□□□□ -1.89
HMGN2P39-201ENST00000398005 EIF5BO60841 1220 aaKnown RBP3.25□□□□□ -1.89
HMGN2P39-201ENST00000398005 RGS20O76081 388 aa3.25□□□□□ -1.89
HMGN2P39-201ENST00000398005 SND1Q7KZF4 910 aaKnown RBP eCLIP3.25□□□□□ -1.89
HMGN2P39-201ENST00000398005 MTMR14Q8NCE2 650 aa3.25□□□□□ -1.89
HMGN2P39-201ENST00000398005 KCNH8Q96L42 1107 aa3.25□□□□□ -1.89
HMGN2P39-201ENST00000398005 FAM217BQ9NTX9 383 aaPredicted RBP3.25□□□□□ -1.89
HMGN2P39-201ENST00000398005 PTPREP23469 700 aa3.24□□□□□ -1.89
HMGN2P39-201ENST00000398005 PRIM1P49642 420 aaKnown RBP3.24□□□□□ -1.89
HMGN2P39-201ENST00000398005 HDGFL1Q5TGJ6 251 aa3.24□□□□□ -1.89
HMGN2P39-201ENST00000398005 MRPL50Q8N5N7 158 aaKnown RBP3.24□□□□□ -1.89
HMGN2P39-201ENST00000398005 WNT2BQ93097 391 aa3.24□□□□□ -1.89
HMGN2P39-201ENST00000398005 PHOX2BQ99453 314 aa3.24□□□□□ -1.89
HMGN2P39-201ENST00000398005 TBC1D2Q9BYX2 928 aa3.24□□□□□ -1.89
HMGN2P39-201ENST00000398005 ADAM33Q9BZ11 813 aa3.24□□□□□ -1.89
HMGN2P39-201ENST00000398005 TBC1D2BQ9UPU7 963 aa3.24□□□□□ -1.89
HMGN2P39-201ENST00000398005 EVI5O60447 810 aa3.23□□□□□ -1.89
HMGN2P39-201ENST00000398005 DIXDC1Q155Q3 683 aa3.23□□□□□ -1.89
HMGN2P39-201ENST00000398005 NLRP7Q8WX94 980 aa3.23□□□□□ -1.89
HMGN2P39-201ENST00000398005 ZDHHC16Q969W1 377 aa3.23□□□□□ -1.89
HMGN2P39-201ENST00000398005 JPH4Q96JJ6 628 aa3.23□□□□□ -1.89
HMGN2P39-201ENST00000398005 IRX2Q9BZI1 471 aaPredicted RBP3.23□□□□□ -1.89
HMGN2P39-201ENST00000398005 VRTNQ9H8Y1 702 aa3.23□□□□□ -1.89
HMGN2P39-201ENST00000398005 UNCXA6NJT0 531 aa3.22□□□□□ -1.89
HMGN2P39-201ENST00000398005 GOLGA8CPA6NN73 597 aa3.22□□□□□ -1.89
HMGN2P39-201ENST00000398005 MAP3K7O43318 606 aa3.22□□□□□ -1.89
HMGN2P39-201ENST00000398005 AP1G2O75843 785 aa3.22□□□□□ -1.89
HMGN2P39-201ENST00000398005 CSPP1Q1MSJ5 1256 aa3.22□□□□□ -1.89
HMGN2P39-201ENST00000398005 PROX2Q3B8N5 592 aa3.22□□□□□ -1.89
HMGN2P39-201ENST00000398005 CFAP70Q5T0N1 1121 aa3.22□□□□□ -1.89
HMGN2P39-201ENST00000398005 FBXO31Q5XUX0 539 aaPredicted RBP3.22□□□□□ -1.89
HMGN2P39-201ENST00000398005 PPP2R2DQ66LE6 453 aa3.22□□□□□ -1.89
HMGN2P39-201ENST00000398005 RIC3Q7Z5B4 369 aa3.22□□□□□ -1.89
HMGN2P39-201ENST00000398005 FAM177A1Q8N128 213 aaPredicted RBP3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms