RNA–Protein interactions for RNA: ENST00000397386.7

LMCD1-202, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-202ENST00000397386 TRPM1Q7Z4N2 1603 aa17.97■□□□□ 0.47
LMCD1-202ENST00000397386 GPRASP1Q5JY77 1395 aa17.97■□□□□ 0.47
LMCD1-202ENST00000397386 MYO5BQ9ULV0 1848 aa17.97■□□□□ 0.47
LMCD1-202ENST00000397386 PTPRMP28827 1452 aa17.97■□□□□ 0.47
LMCD1-202ENST00000397386 ZNF316A6NFI3 1004 aaPredicted RBP17.96■□□□□ 0.47
LMCD1-202ENST00000397386 KIAA1210Q9ULL0 1709 aa17.96■□□□□ 0.47
LMCD1-202ENST00000397386 SETD1BQ9UPS6 1966 aaKnown RBP17.96■□□□□ 0.47
LMCD1-202ENST00000397386 PIK3C2GO75747 1445 aa17.95■□□□□ 0.46
LMCD1-202ENST00000397386 UBR1Q8IWV7 1749 aa17.95■□□□□ 0.46
LMCD1-202ENST00000397386 HDGFP51858 240 aaKnown RBP17.94■□□□□ 0.46
LMCD1-202ENST00000397386 ADGRF5Q8IZF2 1346 aa17.94■□□□□ 0.46
LMCD1-202ENST00000397386 LAMC1P11047 1609 aa17.93■□□□□ 0.46
LMCD1-202ENST00000397386 MYO3AQ8NEV4 1616 aa17.93■□□□□ 0.46
LMCD1-202ENST00000397386 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.93■□□□□ 0.46
LMCD1-202ENST00000397386 ROCK2O75116 1388 aaKnown RBP17.93■□□□□ 0.46
LMCD1-202ENST00000397386 EIF4G2P78344 907 aaKnown RBP eCLIP17.93■□□□□ 0.46
LMCD1-202ENST00000397386 RIMS2Q9UQ26 1411 aa17.92■□□□□ 0.46
LMCD1-202ENST00000397386 CARD11Q9BXL7 1154 aa17.91■□□□□ 0.46
LMCD1-202ENST00000397386 TMEM2Q9UHN6 1383 aa17.91■□□□□ 0.46
LMCD1-202ENST00000397386 CEP170BQ9Y4F5 1589 aaPredicted RBP17.9■□□□□ 0.46
LMCD1-202ENST00000397386 THEMISQ8N1K5 641 aaPredicted RBP17.89■□□□□ 0.45
LMCD1-202ENST00000397386 C14orf93Q9H972 538 aaKnown RBP17.89■□□□□ 0.45
LMCD1-202ENST00000397386 SLIT1O75093 1534 aa17.89■□□□□ 0.45
LMCD1-202ENST00000397386 NBPF1Q3BBV0 1214 aa17.88■□□□□ 0.45
LMCD1-202ENST00000397386 PLPPR3Q6T4P5 718 aa17.88■□□□□ 0.45
LMCD1-202ENST00000397386 ZNF142P52746 1687 aaPredicted RBP17.88■□□□□ 0.45
LMCD1-202ENST00000397386 SETBP1Q9Y6X0 1596 aa17.88■□□□□ 0.45
LMCD1-202ENST00000397386 ARHGAP23Q9P227 1491 aa17.88■□□□□ 0.45
LMCD1-202ENST00000397386 USP47Q96K76 1375 aa17.87■□□□□ 0.45
LMCD1-202ENST00000397386 KDM4FA0A1W2PPD8 638 aa17.87■□□□□ 0.45
LMCD1-202ENST00000397386 HSPA5P11021 654 aaKnown RBP17.87■□□□□ 0.45
LMCD1-202ENST00000397386 CFAP70Q5T0N1 1121 aa17.85■□□□□ 0.45
LMCD1-202ENST00000397386 NUTM2DQ5VT03 806 aaPredicted RBP17.84■□□□□ 0.45
LMCD1-202ENST00000397386 EID1Q9Y6B2 187 aa17.83■□□□□ 0.45
LMCD1-202ENST00000397386 SCAF11Q99590 1463 aaKnown RBP17.83■□□□□ 0.44
LMCD1-202ENST00000397386 ADGRB1O14514 1584 aa17.83■□□□□ 0.44
LMCD1-202ENST00000397386 PLEKHG1Q9ULL1 1385 aa17.81■□□□□ 0.44
LMCD1-202ENST00000397386 IQGAP1P46940 1657 aa17.81■□□□□ 0.44
LMCD1-202ENST00000397386 EIF3AQ14152 1382 aaKnown RBP17.8■□□□□ 0.44
LMCD1-202ENST00000397386 ALKQ9UM73 1620 aa17.8■□□□□ 0.44
LMCD1-202ENST00000397386 TXNDC2Q86VQ3 553 aa17.79■□□□□ 0.44
LMCD1-202ENST00000397386 LTKP29376 864 aa17.78■□□□□ 0.44
LMCD1-202ENST00000397386 ST20-MTHFSA0A0A6YYL1 179 aa17.77■□□□□ 0.44
LMCD1-202ENST00000397386 NRXN3Q9Y4C0 1643 aa17.77■□□□□ 0.44
LMCD1-202ENST00000397386 HIRIP3Q9BW71 556 aaPredicted RBP17.77■□□□□ 0.43
LMCD1-202ENST00000397386 SLC24A1O60721 1099 aa17.76■□□□□ 0.43
LMCD1-202ENST00000397386 ANKLE2Q86XL3 938 aa17.75■□□□□ 0.43
LMCD1-202ENST00000397386 SETD1AO15047 1707 aaKnown RBP17.75■□□□□ 0.43
LMCD1-202ENST00000397386 ASXL1Q8IXJ9 1541 aa17.74■□□□□ 0.43
LMCD1-202ENST00000397386 MED14O60244 1454 aa17.74■□□□□ 0.43
LMCD1-202ENST00000397386 ADAMTS13Q76LX8 1427 aa17.73■□□□□ 0.43
LMCD1-202ENST00000397386 TMEM132EQ6IEE7 984 aa17.72■□□□□ 0.43
LMCD1-202ENST00000397386 SBNO2Q9Y2G9 1366 aa17.72■□□□□ 0.43
LMCD1-202ENST00000397386 YTHDC2Q9H6S0 1430 aaKnown RBP17.72■□□□□ 0.43
LMCD1-202ENST00000397386 DIP2AQ14689 1571 aa17.72■□□□□ 0.43
LMCD1-202ENST00000397386 TESK2Q96S53 571 aa17.72■□□□□ 0.43
LMCD1-202ENST00000397386 POLR1AO95602 1720 aaPredicted RBP17.71■□□□□ 0.43
LMCD1-202ENST00000397386 TBX22Q9Y458 520 aa17.71■□□□□ 0.43
LMCD1-202ENST00000397386 LRPPRCP42704 1394 aaKnown RBP17.7■□□□□ 0.42
LMCD1-202ENST00000397386 ABCC11Q96J66 1382 aa17.7■□□□□ 0.42
LMCD1-202ENST00000397386 DLC1Q96QB1 1528 aa17.69■□□□□ 0.42
LMCD1-202ENST00000397386 WASHC2AQ641Q2 1341 aa17.69■□□□□ 0.42
LMCD1-202ENST00000397386 BCANQ96GW7 911 aa17.69■□□□□ 0.42
LMCD1-202ENST00000397386 CCDC7Q96M83 1385 aa17.68■□□□□ 0.42
LMCD1-202ENST00000397386 TRAK1Q9UPV9 953 aa17.68■□□□□ 0.42
LMCD1-202ENST00000397386 TECPR2O15040 1411 aa17.68■□□□□ 0.42
LMCD1-202ENST00000397386 METP08581 1390 aa17.68■□□□□ 0.42
LMCD1-202ENST00000397386 CENPJQ9HC77 1338 aaPredicted RBP17.68■□□□□ 0.42
LMCD1-202ENST00000397386 PIK3R4Q99570 1358 aa17.67■□□□□ 0.42
LMCD1-202ENST00000397386 ARHGEF28Q8N1W1 1705 aaKnown RBP17.67■□□□□ 0.42
LMCD1-202ENST00000397386 KIF7Q2M1P5 1343 aa17.67■□□□□ 0.42
LMCD1-202ENST00000397386 C11orf95C9JLR9 678 aaPredicted RBP17.67■□□□□ 0.42
LMCD1-202ENST00000397386 SIRT1Q96EB6 747 aa17.67■□□□□ 0.42
LMCD1-202ENST00000397386 TMF1P82094 1093 aa17.66■□□□□ 0.42
LMCD1-202ENST00000397386 DIEXFQ68CQ4 756 aaKnown RBP17.65■□□□□ 0.42
LMCD1-202ENST00000397386 LMTK3Q96Q04 1460 aa17.65■□□□□ 0.42
LMCD1-202ENST00000397386 KNDC1Q76NI1 1749 aa17.64■□□□□ 0.41
LMCD1-202ENST00000397386 CDCA8Q53HL2 280 aa17.64■□□□□ 0.41
LMCD1-202ENST00000397386 SENP3Q9H4L4 574 aaPredicted RBP17.64■□□□□ 0.41
LMCD1-202ENST00000397386 NPHP4O75161 1426 aaPredicted RBP17.64■□□□□ 0.41
LMCD1-202ENST00000397386 SLC26A8Q96RN1 970 aa17.63■□□□□ 0.41
LMCD1-202ENST00000397386 FAM135BQ49AJ0 1406 aa17.63■□□□□ 0.41
LMCD1-202ENST00000397386 STK26Q9P289 416 aa17.62■□□□□ 0.41
LMCD1-202ENST00000397386 CPS1P31327 1500 aa17.62■□□□□ 0.41
LMCD1-202ENST00000397386 QRICH2Q9H0J4 1663 aa17.61■□□□□ 0.41
LMCD1-202ENST00000397386 DISP3Q9P2K9 1392 aa17.61■□□□□ 0.41
LMCD1-202ENST00000397386 DDX10Q13206 875 aaKnown RBP17.6■□□□□ 0.41
LMCD1-202ENST00000397386 PUS7Q96PZ0 661 aaKnown RBP17.59■□□□□ 0.41
LMCD1-202ENST00000397386 PRAM1Q96QH2 718 aa17.59■□□□□ 0.41
LMCD1-202ENST00000397386 POGKQ9P215 609 aa17.58■□□□□ 0.41
LMCD1-202ENST00000397386 PTCH1Q13635 1447 aa17.58■□□□□ 0.4
LMCD1-202ENST00000397386 PTPRUQ92729 1446 aa17.58■□□□□ 0.4
LMCD1-202ENST00000397386 NCKAP5LQ9HCH0 1330 aa17.58■□□□□ 0.4
LMCD1-202ENST00000397386 AMOTL2Q9Y2J4 779 aa17.57■□□□□ 0.4
LMCD1-202ENST00000397386 XRN1Q8IZH2 1706 aaKnown RBP17.56■□□□□ 0.4
LMCD1-202ENST00000397386 EVC2Q86UK5 1308 aa17.55■□□□□ 0.4
LMCD1-202ENST00000397386 ROBO2Q9HCK4 1378 aa17.54■□□□□ 0.4
LMCD1-202ENST00000397386 HSPA2P54652 639 aa17.54■□□□□ 0.4
LMCD1-202ENST00000397386 CHD2O14647 1828 aaKnown RBP17.53■□□□□ 0.4
LMCD1-202ENST00000397386 WAPLQ7Z5K2 1190 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms