RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 ADGRB3O60242 1522 aa19.67■□□□□ 0.74
SEC13-209ENST00000397117 RBM33Q96EV2 1170 aaKnown RBP19.66■□□□□ 0.74
SEC13-209ENST00000397117 SLC52A1Q9NWF4 448 aa19.66■□□□□ 0.74
SEC13-209ENST00000397117 NWD1Q149M9 1564 aa19.65■□□□□ 0.74
SEC13-209ENST00000397117 SETD5Q9C0A6 1442 aa19.64■□□□□ 0.74
SEC13-209ENST00000397117 POTEAQ6S8J7 498 aa19.64■□□□□ 0.73
SEC13-209ENST00000397117 ADGRL2O95490 1459 aa19.63■□□□□ 0.73
SEC13-209ENST00000397117 NKTRP30414 1462 aaKnown RBP19.63■□□□□ 0.73
SEC13-209ENST00000397117 ROCK1Q13464 1354 aa19.63■□□□□ 0.73
SEC13-209ENST00000397117 MYO5BQ9ULV0 1848 aa19.62■□□□□ 0.73
SEC13-209ENST00000397117 HFM1A2PYH4 1435 aa19.62■□□□□ 0.73
SEC13-209ENST00000397117 CHD2O14647 1828 aaKnown RBP19.61■□□□□ 0.73
SEC13-209ENST00000397117 RPRD2Q5VT52 1461 aaKnown RBP19.6■□□□□ 0.73
SEC13-209ENST00000397117 ZFYVE9O95405 1425 aa19.6■□□□□ 0.73
SEC13-209ENST00000397117 RAB3GAP2Q9H2M9 1393 aa19.59■□□□□ 0.73
SEC13-209ENST00000397117 BCANQ96GW7 911 aa19.58■□□□□ 0.73
SEC13-209ENST00000397117 SLAIN2Q9P270 581 aa19.58■□□□□ 0.73
SEC13-209ENST00000397117 NAIPQ13075 1403 aa19.58■□□□□ 0.72
SEC13-209ENST00000397117 MSH6P52701 1360 aa19.58■□□□□ 0.72
SEC13-209ENST00000397117 PLEKHG1Q9ULL1 1385 aa19.58■□□□□ 0.72
SEC13-209ENST00000397117 ANKRD50Q9ULJ7 1429 aa19.57■□□□□ 0.72
SEC13-209ENST00000397117 TMEM131LA2VDJ0 1609 aa19.56■□□□□ 0.72
SEC13-209ENST00000397117 PHLPP1O60346 1717 aa19.56■□□□□ 0.72
SEC13-209ENST00000397117 GCC2Q8IWJ2 1684 aa19.56■□□□□ 0.72
SEC13-209ENST00000397117 RIMS2Q9UQ26 1411 aa19.56■□□□□ 0.72
SEC13-209ENST00000397117 HRCP23327 699 aa19.54■□□□□ 0.72
SEC13-209ENST00000397117 HDGFP51858 240 aaKnown RBP19.54■□□□□ 0.72
SEC13-209ENST00000397117 TBX22Q9Y458 520 aa19.54■□□□□ 0.72
SEC13-209ENST00000397117 CCER1Q8TC90 406 aaPredicted RBP19.54■□□□□ 0.72
SEC13-209ENST00000397117 JCADQ9P266 1359 aa19.52■□□□□ 0.72
SEC13-209ENST00000397117 NCOA3Q9Y6Q9 1424 aa19.52■□□□□ 0.71
SEC13-209ENST00000397117 PPP1R15AO75807 674 aaPredicted RBP19.51■□□□□ 0.71
SEC13-209ENST00000397117 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.5■□□□□ 0.71
SEC13-209ENST00000397117 COL16A1Q07092 1604 aaPredicted RBP19.49■□□□□ 0.71
SEC13-209ENST00000397117 UNC13BO14795 1591 aa19.49■□□□□ 0.71
SEC13-209ENST00000397117 ADAMTS13Q76LX8 1427 aa19.48■□□□□ 0.71
SEC13-209ENST00000397117 E9PCH4 1651 aa19.48■□□□□ 0.71
SEC13-209ENST00000397117 ACIN1Q9UKV3 1341 aaKnown RBP19.47■□□□□ 0.71
SEC13-209ENST00000397117 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.46■□□□□ 0.71
SEC13-209ENST00000397117 SETD1AO15047 1707 aaKnown RBP19.45■□□□□ 0.7
SEC13-209ENST00000397117 CHGAP10645 457 aaKnown RBP19.45■□□□□ 0.7
SEC13-209ENST00000397117 PIK3R4Q99570 1358 aa19.45■□□□□ 0.7
SEC13-209ENST00000397117 NUTM2DQ5VT03 806 aaPredicted RBP19.44■□□□□ 0.7
SEC13-209ENST00000397117 C19orf44Q9H6X5 657 aa19.44■□□□□ 0.7
SEC13-209ENST00000397117 DIP2AQ14689 1571 aa19.44■□□□□ 0.7
SEC13-209ENST00000397117 CADPS2Q86UW7 1296 aa19.43■□□□□ 0.7
SEC13-209ENST00000397117 TRIM52Q96A61 297 aa19.43■□□□□ 0.7
SEC13-209ENST00000397117 SPATA31A6Q5VVP1 1343 aa19.43■□□□□ 0.7
SEC13-209ENST00000397117 LRP6O75581 1613 aa19.42■□□□□ 0.7
SEC13-209ENST00000397117 IQGAP3Q86VI3 1631 aa19.42■□□□□ 0.7
SEC13-209ENST00000397117 C14orf37Q86TY3 774 aa19.42■□□□□ 0.7
SEC13-209ENST00000397117 DHX57Q6P158 1386 aaKnown RBP19.42■□□□□ 0.7
SEC13-209ENST00000397117 AHDC1Q5TGY3 1603 aaPredicted RBP19.42■□□□□ 0.7
SEC13-209ENST00000397117 SHPRHQ149N8 1683 aa19.4■□□□□ 0.7
SEC13-209ENST00000397117 PTPRUQ92729 1446 aa19.4■□□□□ 0.7
SEC13-209ENST00000397117 ATF3P18847 181 aa19.4■□□□□ 0.7
SEC13-209ENST00000397117 AMOTL2Q9Y2J4 779 aa19.39■□□□□ 0.69
SEC13-209ENST00000397117 TRPM2O94759 1503 aa19.38■□□□□ 0.69
SEC13-209ENST00000397117 ZNF772Q68DY9 489 aaPredicted RBP19.36■□□□□ 0.69
SEC13-209ENST00000397117 BRINP3Q76B58 766 aa19.36■□□□□ 0.69
SEC13-209ENST00000397117 NUP155O75694 1391 aa19.35■□□□□ 0.69
SEC13-209ENST00000397117 MEX3CQ5U5Q3 659 aaKnown RBP19.35■□□□□ 0.69
SEC13-209ENST00000397117 NRXN3Q9Y4C0 1643 aa19.34■□□□□ 0.69
SEC13-209ENST00000397117 CLSPNQ9HAW4 1339 aa19.34■□□□□ 0.69
SEC13-209ENST00000397117 ZEB1P37275 1124 aaPredicted RBP19.33■□□□□ 0.69
SEC13-209ENST00000397117 DCCP43146 1447 aa19.33■□□□□ 0.68
SEC13-209ENST00000397117 UPF1Q92900 1129 aaKnown RBP eCLIP19.33■□□□□ 0.68
SEC13-209ENST00000397117 XRN1Q8IZH2 1706 aaKnown RBP19.32■□□□□ 0.68
SEC13-209ENST00000397117 SETBP1Q9Y6X0 1596 aa19.31■□□□□ 0.68
SEC13-209ENST00000397117 MPHOSPH9Q99550 1183 aa19.3■□□□□ 0.68
SEC13-209ENST00000397117 SLC4A1APQ9BWU0 796 aaKnown RBP19.29■□□□□ 0.68
SEC13-209ENST00000397117 SPHKAPQ2M3C7 1700 aa19.29■□□□□ 0.68
SEC13-209ENST00000397117 ASXL1Q8IXJ9 1541 aa19.29■□□□□ 0.68
SEC13-209ENST00000397117 MST1RQ04912 1400 aa19.28■□□□□ 0.68
SEC13-209ENST00000397117 NHSL1Q5SYE7 1610 aa19.28■□□□□ 0.68
SEC13-209ENST00000397117 RXRBP28702 533 aa19.28■□□□□ 0.68
SEC13-209ENST00000397117 METP08581 1390 aa19.27■□□□□ 0.68
SEC13-209ENST00000397117 NUTM2BA6NNL0 878 aaPredicted RBP19.27■□□□□ 0.68
SEC13-209ENST00000397117 NUTM2EB1AL46 878 aaPredicted RBP19.27■□□□□ 0.68
SEC13-209ENST00000397117 NUTM2AQ8IVF1 878 aaPredicted RBP19.27■□□□□ 0.68
SEC13-209ENST00000397117 CDK12Q9NYV4 1490 aaPredicted RBP19.25■□□□□ 0.67
SEC13-209ENST00000397117 ZNF326Q5BKZ1 582 aaKnown RBP19.24■□□□□ 0.67
SEC13-209ENST00000397117 LRRC59Q96AG4 307 aaKnown RBP19.24■□□□□ 0.67
SEC13-209ENST00000397117 AFF2P51816 1311 aa19.24■□□□□ 0.67
SEC13-209ENST00000397117 ADGRL3Q9HAR2 1447 aa19.21■□□□□ 0.67
SEC13-209ENST00000397117 NEXMIFQ5QGS0 1516 aa19.21■□□□□ 0.67
SEC13-209ENST00000397117 NALCNQ8IZF0 1738 aa19.2■□□□□ 0.66
SEC13-209ENST00000397117 DDX17Q92841 729 aaKnown RBP19.2■□□□□ 0.66
SEC13-209ENST00000397117 CLTCL1P53675 1640 aa19.2■□□□□ 0.66
SEC13-209ENST00000397117 PNPLA6Q8IY17 1366 aa19.19■□□□□ 0.66
SEC13-209ENST00000397117 FOXD1Q16676 465 aa19.18■□□□□ 0.66
SEC13-209ENST00000397117 KIF1BO60333 1816 aa19.17■□□□□ 0.66
SEC13-209ENST00000397117 QTRT2Q9H974 415 aaKnown RBP19.17■□□□□ 0.66
SEC13-209ENST00000397117 LAMC1P11047 1609 aa19.16■□□□□ 0.66
SEC13-209ENST00000397117 C1orf167Q5SNV9 1468 aa19.15■□□□□ 0.66
SEC13-209ENST00000397117 C8orf37Q96NL8 207 aa19.15■□□□□ 0.66
SEC13-209ENST00000397117 RBM6P78332 1123 aaKnown RBP19.14■□□□□ 0.66
SEC13-209ENST00000397117 NEUROD1Q13562 356 aa19.14■□□□□ 0.66
SEC13-209ENST00000397117 RGS12O14924 1447 aa19.14■□□□□ 0.65
SEC13-209ENST00000397117 SIN3AQ96ST3 1273 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms