RNA–Protein interactions for RNA: ENST00000397113.6

FGFR1-209, Transcript of fibroblast growth factor receptor 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene FGFR1, Length 3,680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-209ENST00000397113 PKD2Q13563 968 aa13.44□□□□□ -0.26
FGFR1-209ENST00000397113 IQGAP1P46940 1657 aa13.43□□□□□ -0.26
FGFR1-209ENST00000397113 FRAT2O75474 233 aaPredicted RBP13.43□□□□□ -0.26
FGFR1-209ENST00000397113 DDRGK1Q96HY6 314 aa13.43□□□□□ -0.26
FGFR1-209ENST00000397113 CAMSAP1Q5T5Y3 1602 aa13.42□□□□□ -0.26
FGFR1-209ENST00000397113 CHMP7Q8WUX9 453 aaPredicted RBP13.42□□□□□ -0.26
FGFR1-209ENST00000397113 USP47Q96K76 1375 aa13.42□□□□□ -0.26
FGFR1-209ENST00000397113 SMG6Q86US8 1419 aaKnown RBP13.41□□□□□ -0.26
FGFR1-209ENST00000397113 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.41□□□□□ -0.266e-7■■□□□ 13.1
FGFR1-209ENST00000397113 SETD1AO15047 1707 aaKnown RBP13.41□□□□□ -0.26
FGFR1-209ENST00000397113 UHRF1BP1Q6BDS2 1440 aa13.41□□□□□ -0.26
FGFR1-209ENST00000397113 PPLO60437 1756 aa13.41□□□□□ -0.26
FGFR1-209ENST00000397113 EFCAB6Q5THR3 1501 aa13.4□□□□□ -0.26
FGFR1-209ENST00000397113 CANXP27824 592 aaKnown RBP13.4□□□□□ -0.26
FGFR1-209ENST00000397113 C20orf194Q5TEA3 1177 aa13.4□□□□□ -0.26
FGFR1-209ENST00000397113 GZF1Q9H116 711 aaPredicted RBP13.4□□□□□ -0.26
FGFR1-209ENST00000397113 RPRD2Q5VT52 1461 aaKnown RBP13.39□□□□□ -0.27
FGFR1-209ENST00000397113 ARHGEF40Q8TER5 1519 aa13.39□□□□□ -0.27
FGFR1-209ENST00000397113 MADDQ8WXG6 1647 aa13.38□□□□□ -0.27
FGFR1-209ENST00000397113 FBLN2P98095 1184 aa13.38□□□□□ -0.27
FGFR1-209ENST00000397113 NRXN1Q9ULB1 1477 aa13.38□□□□□ -0.27
FGFR1-209ENST00000397113 PTPRTO14522 1441 aa13.38□□□□□ -0.27
FGFR1-209ENST00000397113 USP35Q9P2H5 1018 aa13.38□□□□□ -0.27
FGFR1-209ENST00000397113 POGZQ7Z3K3 1410 aa13.36□□□□□ -0.27
FGFR1-209ENST00000397113 ASXL2Q76L83 1435 aa13.36□□□□□ -0.27
FGFR1-209ENST00000397113 C9orf84Q5VXU9 1444 aa13.35□□□□□ -0.27
FGFR1-209ENST00000397113 NEUROD2Q15784 382 aa13.35□□□□□ -0.27
FGFR1-209ENST00000397113 CFDP1Q9UEE9 299 aaPredicted RBP13.35□□□□□ -0.27
FGFR1-209ENST00000397113 RSPH4AQ5TD94 716 aa13.34□□□□□ -0.27
FGFR1-209ENST00000397113 NAP1L5Q96NT1 182 aaPredicted RBP13.34□□□□□ -0.27
FGFR1-209ENST00000397113 WDR43Q15061 677 aaKnown RBP eCLIP13.34□□□□□ -0.27
FGFR1-209ENST00000397113 CCDC146Q8IYE0 955 aa13.33□□□□□ -0.28
FGFR1-209ENST00000397113 UGGT1Q9NYU2 1555 aa13.33□□□□□ -0.28
FGFR1-209ENST00000397113 ARHGAP5Q13017 1502 aa13.33□□□□□ -0.28
FGFR1-209ENST00000397113 MYBBP1AQ9BQG0 1328 aaKnown RBP13.32□□□□□ -0.28
FGFR1-209ENST00000397113 KIF1BO60333 1816 aa13.31□□□□□ -0.28
FGFR1-209ENST00000397113 SETBP1Q9Y6X0 1596 aa13.31□□□□□ -0.28
FGFR1-209ENST00000397113 PREX1Q8TCU6 1659 aa13.3□□□□□ -0.28
FGFR1-209ENST00000397113 KNDC1Q76NI1 1749 aa13.3□□□□□ -0.28
FGFR1-209ENST00000397113 ADGRB3O60242 1522 aa13.3□□□□□ -0.28
FGFR1-209ENST00000397113 NLRP13Q86W25 1043 aa13.3□□□□□ -0.28
FGFR1-209ENST00000397113 ARHGAP31Q2M1Z3 1444 aa13.3□□□□□ -0.28
FGFR1-209ENST00000397113 CLTCL1P53675 1640 aa13.29□□□□□ -0.28
FGFR1-209ENST00000397113 RIMS1Q86UR5 1692 aaKnown RBP13.29□□□□□ -0.28
FGFR1-209ENST00000397113 MS4A1P11836 297 aa13.29□□□□□ -0.28
FGFR1-209ENST00000397113 POGKQ9P215 609 aa13.28□□□□□ -0.28
FGFR1-209ENST00000397113 ANKRD30BQ9BXX2 1392 aa13.28□□□□□ -0.28
FGFR1-209ENST00000397113 KIF15Q9NS87 1388 aa13.27□□□□□ -0.28
FGFR1-209ENST00000397113 SYNMO15061 1565 aa13.27□□□□□ -0.29
FGFR1-209ENST00000397113 RALBP1Q15311 655 aa13.27□□□□□ -0.29
FGFR1-209ENST00000397113 ZNF142P52746 1687 aaPredicted RBP13.27□□□□□ -0.29
FGFR1-209ENST00000397113 FANCAO15360 1455 aa13.27□□□□□ -0.29
FGFR1-209ENST00000397113 KTN1Q86UP2 1357 aaKnown RBP13.27□□□□□ -0.29
FGFR1-209ENST00000397113 SENP3Q9H4L4 574 aaPredicted RBP13.27□□□□□ -0.29
FGFR1-209ENST00000397113 CLTCQ00610 1675 aaKnown RBP13.27□□□□□ -0.29
FGFR1-209ENST00000397113 TNNT2P45379 298 aaPredicted RBP13.26□□□□□ -0.29
FGFR1-209ENST00000397113 FAM161AQ3B820 660 aa13.26□□□□□ -0.29
FGFR1-209ENST00000397113 PANK3Q9H999 370 aa13.26□□□□□ -0.29
FGFR1-209ENST00000397113 MYOM2P54296 1465 aa13.26□□□□□ -0.29
FGFR1-209ENST00000397113 ROCK2O75116 1388 aaKnown RBP13.26□□□□□ -0.29
FGFR1-209ENST00000397113 NUP155O75694 1391 aa13.25□□□□□ -0.29
FGFR1-209ENST00000397113 DHX29Q7Z478 1369 aaKnown RBP13.25□□□□□ -0.29
FGFR1-209ENST00000397113 ADAMTS8Q9UP79 889 aa13.25□□□□□ -0.29
FGFR1-209ENST00000397113 PLA2R1Q13018 1463 aa13.25□□□□□ -0.29
FGFR1-209ENST00000397113 NBPF1Q3BBV0 1214 aa13.25□□□□□ -0.29
FGFR1-209ENST00000397113 SPATA31D1Q6ZQQ2 1576 aa13.24□□□□□ -0.29
FGFR1-209ENST00000397113 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.24□□□□□ -0.29
FGFR1-209ENST00000397113 PRAG1Q86YV5 1406 aa13.24□□□□□ -0.29
FGFR1-209ENST00000397113 RNF123Q5XPI4 1314 aa13.23□□□□□ -0.29
FGFR1-209ENST00000397113 SPATA31E1Q6ZUB1 1445 aa13.23□□□□□ -0.29
FGFR1-209ENST00000397113 TSPY4P0CV99 314 aa13.23□□□□□ -0.29
FGFR1-209ENST00000397113 TSPY10P0CW01 314 aa13.23□□□□□ -0.29
FGFR1-209ENST00000397113 VSIG10Q8N0Z9 540 aa13.23□□□□□ -0.29
FGFR1-209ENST00000397113 BCL2L13Q9BXK5 485 aa13.23□□□□□ -0.29
FGFR1-209ENST00000397113 CLUAP1Q96AJ1 413 aa13.22□□□□□ -0.29
FGFR1-209ENST00000397113 USP32Q8NFA0 1604 aa13.22□□□□□ -0.29
FGFR1-209ENST00000397113 ABCC3O15438 1527 aa13.22□□□□□ -0.29
FGFR1-209ENST00000397113 MYOM1P52179 1685 aa13.22□□□□□ -0.29
FGFR1-209ENST00000397113 WASHC2CQ9Y4E1 1318 aa13.21□□□□□ -0.29
FGFR1-209ENST00000397113 RALGAPBQ86X10 1494 aa13.21□□□□□ -0.29
FGFR1-209ENST00000397113 KNSTRNQ9Y448 316 aa13.21□□□□□ -0.29
FGFR1-209ENST00000397113 UPF2Q9HAU5 1272 aaKnown RBP13.21□□□□□ -0.3
FGFR1-209ENST00000397113 BCAR3O75815 825 aa13.2□□□□□ -0.3
FGFR1-209ENST00000397113 PDE3BQ13370 1112 aa13.2□□□□□ -0.3
FGFR1-209ENST00000397113 ARID3AQ99856 593 aa13.2□□□□□ -0.3
FGFR1-209ENST00000397113 COG6Q9Y2V7 657 aa13.2□□□□□ -0.3
FGFR1-209ENST00000397113 ANKRD30AQ9BXX3 1397 aa13.2□□□□□ -0.3
FGFR1-209ENST00000397113 TMEM131LA2VDJ0 1609 aa13.19□□□□□ -0.3
FGFR1-209ENST00000397113 BECN1Q14457 450 aa13.19□□□□□ -0.3
FGFR1-209ENST00000397113 CENPQQ7L2Z9 268 aaPredicted RBP13.19□□□□□ -0.3
FGFR1-209ENST00000397113 USP54Q70EL1 1684 aa13.19□□□□□ -0.3
FGFR1-209ENST00000397113 UBE2Q2Q8WVN8 375 aa13.19□□□□□ -0.3
FGFR1-209ENST00000397113 TRAPPC8Q9Y2L5 1435 aa13.19□□□□□ -0.3
FGFR1-209ENST00000397113 ANKRD50Q9ULJ7 1429 aa13.18□□□□□ -0.3
FGFR1-209ENST00000397113 BRD4O60885 1362 aaPredicted RBP13.17□□□□□ -0.3
FGFR1-209ENST00000397113 GOLGA2Q08379 1002 aa13.17□□□□□ -0.3
FGFR1-209ENST00000397113 RRP7AQ9Y3A4 280 aaKnown RBP13.17□□□□□ -0.3
FGFR1-209ENST00000397113 APAF1O14727 1248 aa13.17□□□□□ -0.3
FGFR1-209ENST00000397113 GPRASP1Q5JY77 1395 aa13.17□□□□□ -0.3
FGFR1-209ENST00000397113 HNRNPMP52272 730 aaKnown RBP eCLIP13.17□□□□□ -0.36e-6■□□□□ 8.8
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms