RNA–Protein interactions for RNA: ENST00000397087.7

RAPGEF4-203, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF4, Length 4,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-203ENST00000397087 NBPF8Q3BBV2 869 aa8.37□□□□□ -1.07
RAPGEF4-203ENST00000397087 BRD4O60885 1362 aaPredicted RBP8.37□□□□□ -1.07
RAPGEF4-203ENST00000397087 TRIM52Q96A61 297 aa8.36□□□□□ -1.07
RAPGEF4-203ENST00000397087 HIRIP3Q9BW71 556 aaPredicted RBP8.36□□□□□ -1.07
RAPGEF4-203ENST00000397087 RIMBP3CA6NJZ7 1639 aa8.36□□□□□ -1.07
RAPGEF4-203ENST00000397087 RIMBP3BA6NNM3 1639 aa8.36□□□□□ -1.07
RAPGEF4-203ENST00000397087 RIMBP3Q9UFD9 1639 aa8.36□□□□□ -1.07
RAPGEF4-203ENST00000397087 ADGRB1O14514 1584 aa8.35□□□□□ -1.07
RAPGEF4-203ENST00000397087 SETD1AO15047 1707 aaKnown RBP8.35□□□□□ -1.07
RAPGEF4-203ENST00000397087 ARHGEF28Q8N1W1 1705 aaKnown RBP8.35□□□□□ -1.07
RAPGEF4-203ENST00000397087 PARD3Q8TEW0 1356 aa8.35□□□□□ -1.07
RAPGEF4-203ENST00000397087 KIF7Q2M1P5 1343 aa8.35□□□□□ -1.07
RAPGEF4-203ENST00000397087 ARHGEF40Q8TER5 1519 aa8.35□□□□□ -1.07
RAPGEF4-203ENST00000397087 ARID3CA6NKF2 412 aa8.35□□□□□ -1.07
RAPGEF4-203ENST00000397087 RPGRIP1LQ68CZ1 1315 aa8.35□□□□□ -1.07
RAPGEF4-203ENST00000397087 NEXMIFQ5QGS0 1516 aa8.34□□□□□ -1.07
RAPGEF4-203ENST00000397087 DLC1Q96QB1 1528 aa8.34□□□□□ -1.07
RAPGEF4-203ENST00000397087 CHIC2Q9UKJ5 165 aa8.34□□□□□ -1.07
RAPGEF4-203ENST00000397087 SPATA31D1Q6ZQQ2 1576 aa8.34□□□□□ -1.07
RAPGEF4-203ENST00000397087 QRICH2Q9H0J4 1663 aa8.34□□□□□ -1.07
RAPGEF4-203ENST00000397087 TMEM131LA2VDJ0 1609 aa8.34□□□□□ -1.07
RAPGEF4-203ENST00000397087 RIMS1Q86UR5 1692 aaKnown RBP8.34□□□□□ -1.07
RAPGEF4-203ENST00000397087 BLMP54132 1417 aaPredicted RBP8.34□□□□□ -1.08
RAPGEF4-203ENST00000397087 EIF3AQ14152 1382 aaKnown RBP8.33□□□□□ -1.08
RAPGEF4-203ENST00000397087 FBLN2P98095 1184 aa8.33□□□□□ -1.08
RAPGEF4-203ENST00000397087 SMG6Q86US8 1419 aaKnown RBP8.33□□□□□ -1.08
RAPGEF4-203ENST00000397087 KIF13AQ9H1H9 1805 aa8.33□□□□□ -1.08
RAPGEF4-203ENST00000397087 ZBED9Q6R2W3 1325 aa8.33□□□□□ -1.08
RAPGEF4-203ENST00000397087 SPAG9O60271 1321 aaKnown RBP8.32□□□□□ -1.08
RAPGEF4-203ENST00000397087 PIK3C2GO75747 1445 aa8.32□□□□□ -1.08
RAPGEF4-203ENST00000397087 RALBP1Q15311 655 aa8.32□□□□□ -1.08
RAPGEF4-203ENST00000397087 CD109Q6YHK3 1445 aa8.32□□□□□ -1.08
RAPGEF4-203ENST00000397087 HNRNPMP52272 730 aaKnown RBP eCLIP8.32□□□□□ -1.08
RAPGEF4-203ENST00000397087 PRKRIP1Q9H875 184 aaPredicted RBP8.31□□□□□ -1.08
RAPGEF4-203ENST00000397087 FOXD4L1Q9NU39 408 aa8.31□□□□□ -1.08
RAPGEF4-203ENST00000397087 RNF123Q5XPI4 1314 aa8.31□□□□□ -1.08
RAPGEF4-203ENST00000397087 MED14O60244 1454 aa8.3□□□□□ -1.08
RAPGEF4-203ENST00000397087 OSCARQ8IYS5 282 aa8.3□□□□□ -1.08
RAPGEF4-203ENST00000397087 ASXL1Q8IXJ9 1541 aa8.3□□□□□ -1.08
RAPGEF4-203ENST00000397087 NINLQ9Y2I6 1382 aa8.29□□□□□ -1.08
RAPGEF4-203ENST00000397087 ERVK-7P63135 1459 aa8.29□□□□□ -1.08
RAPGEF4-203ENST00000397087 POTEDQ86YR6 584 aa8.28□□□□□ -1.08
RAPGEF4-203ENST00000397087 USP54Q70EL1 1684 aa8.28□□□□□ -1.08
RAPGEF4-203ENST00000397087 DDX10Q13206 875 aaKnown RBP8.28□□□□□ -1.08
RAPGEF4-203ENST00000397087 POLR3GLQ9BT43 218 aa8.27□□□□□ -1.09
RAPGEF4-203ENST00000397087 ADGRB2O60241 1585 aa8.27□□□□□ -1.09
RAPGEF4-203ENST00000397087 CDCA8Q53HL2 280 aa8.27□□□□□ -1.09
RAPGEF4-203ENST00000397087 NGEFQ8N5V2 710 aa8.27□□□□□ -1.09
RAPGEF4-203ENST00000397087 CDC42BPGQ6DT37 1551 aa8.26□□□□□ -1.09
RAPGEF4-203ENST00000397087 LRRC7Q96NW7 1537 aa8.26□□□□□ -1.09
RAPGEF4-203ENST00000397087 NPATQ14207 1427 aa8.26□□□□□ -1.09
RAPGEF4-203ENST00000397087 MYBBP1AQ9BQG0 1328 aaKnown RBP8.26□□□□□ -1.09
RAPGEF4-203ENST00000397087 SHPRHQ149N8 1683 aa8.26□□□□□ -1.09
RAPGEF4-203ENST00000397087 TESK2Q96S53 571 aa8.25□□□□□ -1.09
RAPGEF4-203ENST00000397087 NSD2O96028 1365 aa8.25□□□□□ -1.09
RAPGEF4-203ENST00000397087 ZNF777Q9ULD5 760 aaPredicted RBP8.24□□□□□ -1.09
RAPGEF4-203ENST00000397087 KIF20BQ96Q89 1820 aa8.24□□□□□ -1.09
RAPGEF4-203ENST00000397087 DIP2AQ14689 1571 aa8.24□□□□□ -1.09
RAPGEF4-203ENST00000397087 C11orf95C9JLR9 678 aaPredicted RBP8.24□□□□□ -1.09
RAPGEF4-203ENST00000397087 PDE3BQ13370 1112 aa8.24□□□□□ -1.09
RAPGEF4-203ENST00000397087 SUPT16HQ9Y5B9 1047 aaKnown RBP8.23□□□□□ -1.09
RAPGEF4-203ENST00000397087 CPS1P31327 1500 aa8.23□□□□□ -1.09
RAPGEF4-203ENST00000397087 PER1O15534 1290 aaPredicted RBP8.22□□□□□ -1.09
RAPGEF4-203ENST00000397087 MYO5BQ9ULV0 1848 aa8.22□□□□□ -1.09
RAPGEF4-203ENST00000397087 TOPAZ1Q8N9V7 1692 aa8.22□□□□□ -1.09
RAPGEF4-203ENST00000397087 SENP3-EIF4A1A0A087X0R7 540 aa8.22□□□□□ -1.09
RAPGEF4-203ENST00000397087 CARD11Q9BXL7 1154 aa8.22□□□□□ -1.09
RAPGEF4-203ENST00000397087 NRXN3Q9Y4C0 1643 aa8.21□□□□□ -1.09
RAPGEF4-203ENST00000397087 AKAP12Q02952 1782 aa8.21□□□□□ -1.1
RAPGEF4-203ENST00000397087 ATF5Q9Y2D1 282 aaPredicted RBP8.2□□□□□ -1.1
RAPGEF4-203ENST00000397087 MON2Q7Z3U7 1717 aa8.2□□□□□ -1.1
RAPGEF4-203ENST00000397087 U3KPZ7 1027 aaPredicted RBP8.2□□□□□ -1.1
RAPGEF4-203ENST00000397087 TECPR2O15040 1411 aa8.19□□□□□ -1.1
RAPGEF4-203ENST00000397087 TMF1P82094 1093 aa8.19□□□□□ -1.1
RAPGEF4-203ENST00000397087 MYT1Q01538 1121 aa8.19□□□□□ -1.1
RAPGEF4-203ENST00000397087 UBR1Q8IWV7 1749 aa8.19□□□□□ -1.1
RAPGEF4-203ENST00000397087 DISP3Q9P2K9 1392 aa8.19□□□□□ -1.1
RAPGEF4-203ENST00000397087 NEFLP07196 543 aa8.19□□□□□ -1.1
RAPGEF4-203ENST00000397087 KCNH8Q96L42 1107 aa8.19□□□□□ -1.1
RAPGEF4-203ENST00000397087 ZNF142P52746 1687 aaPredicted RBP8.19□□□□□ -1.1
RAPGEF4-203ENST00000397087 NLRP13Q86W25 1043 aa8.18□□□□□ -1.1
RAPGEF4-203ENST00000397087 NPM1P06748 294 aaKnown RBP eCLIP8.18□□□□□ -1.1
RAPGEF4-203ENST00000397087 PNISRQ8TF01 805 aaKnown RBP8.18□□□□□ -1.1
RAPGEF4-203ENST00000397087 TULP4Q9NRJ4 1543 aa8.18□□□□□ -1.1
RAPGEF4-203ENST00000397087 PTPRMP28827 1452 aa8.18□□□□□ -1.1
RAPGEF4-203ENST00000397087 NRKQ7Z2Y5 1582 aa8.17□□□□□ -1.1
RAPGEF4-203ENST00000397087 IQSEC2Q5JU85 1478 aa8.17□□□□□ -1.1
RAPGEF4-203ENST00000397087 ALKQ9UM73 1620 aa8.17□□□□□ -1.1
RAPGEF4-203ENST00000397087 DCAF11Q8TEB1 546 aa8.17□□□□□ -1.1
RAPGEF4-203ENST00000397087 SLC52A1Q9NWF4 448 aa8.17□□□□□ -1.1
RAPGEF4-203ENST00000397087 NALCNQ8IZF0 1738 aa8.16□□□□□ -1.1
RAPGEF4-203ENST00000397087 POLR3AO14802 1390 aaPredicted RBP8.16□□□□□ -1.1
RAPGEF4-203ENST00000397087 SIRT1Q96EB6 747 aa8.16□□□□□ -1.1
RAPGEF4-203ENST00000397087 ATP7BP35670 1465 aa8.16□□□□□ -1.1
RAPGEF4-203ENST00000397087 IRX6P78412 446 aaPredicted RBP8.16□□□□□ -1.1
RAPGEF4-203ENST00000397087 C14orf93Q9H972 538 aaKnown RBP8.16□□□□□ -1.1
RAPGEF4-203ENST00000397087 VIRMAQ69YN4 1812 aaKnown RBP8.15□□□□□ -1.1
RAPGEF4-203ENST00000397087 ITSN1Q15811 1721 aa8.15□□□□□ -1.1
RAPGEF4-203ENST00000397087 FKBP8Q14318 412 aa8.15□□□□□ -1.11
RAPGEF4-203ENST00000397087 ZNF326Q5BKZ1 582 aaKnown RBP8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms