RNA–Protein interactions for RNA: ENST00000397081.7

RAPGEF4-201, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAPGEF4, Length 4,299 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-201ENST00000397081 ERBINQ96RT1 1412 aa18.81■□□□□ 0.6
RAPGEF4-201ENST00000397081 C8orf34Q49A92 452 aa18.81■□□□□ 0.6
RAPGEF4-201ENST00000397081 BCORL1Q5H9F3 1711 aa18.81■□□□□ 0.6
RAPGEF4-201ENST00000397081 PLEKHH1Q9ULM0 1364 aa18.81■□□□□ 0.6
RAPGEF4-201ENST00000397081 PARD3Q8TEW0 1356 aa18.8■□□□□ 0.6
RAPGEF4-201ENST00000397081 TESK2Q96S53 571 aa18.8■□□□□ 0.6
RAPGEF4-201ENST00000397081 CFAP70Q5T0N1 1121 aa18.79■□□□□ 0.6
RAPGEF4-201ENST00000397081 ITSN2Q9NZM3 1697 aa18.79■□□□□ 0.6
RAPGEF4-201ENST00000397081 E9PSI1 815 aa18.79■□□□□ 0.6
RAPGEF4-201ENST00000397081 SEC24BO95487 1268 aa18.79■□□□□ 0.6
RAPGEF4-201ENST00000397081 RALGAPBQ86X10 1494 aa18.78■□□□□ 0.6
RAPGEF4-201ENST00000397081 SLFN5Q08AF3 891 aa18.78■□□□□ 0.6
RAPGEF4-201ENST00000397081 CCDC141Q6ZP82 1450 aa18.77■□□□□ 0.6
RAPGEF4-201ENST00000397081 SYCP2Q9BX26 1530 aa18.77■□□□□ 0.59
RAPGEF4-201ENST00000397081 ITPRIPQ8IWB1 547 aa18.76■□□□□ 0.59
RAPGEF4-201ENST00000397081 DNMT1P26358 1616 aaKnown RBP18.76■□□□□ 0.59
RAPGEF4-201ENST00000397081 ABCC10Q5T3U5 1492 aa18.76■□□□□ 0.59
RAPGEF4-201ENST00000397081 DMRT2Q9Y5R5 561 aa18.76■□□□□ 0.59
RAPGEF4-201ENST00000397081 TNNQ9UQP3 1299 aa18.75■□□□□ 0.59
RAPGEF4-201ENST00000397081 PLPPR3Q6T4P5 718 aa18.75■□□□□ 0.59
RAPGEF4-201ENST00000397081 SCAPERQ9BY12 1400 aa18.74■□□□□ 0.59
RAPGEF4-201ENST00000397081 CFAP53Q96M91 514 aa18.74■□□□□ 0.59
RAPGEF4-201ENST00000397081 ASXL2Q76L83 1435 aa18.73■□□□□ 0.59
RAPGEF4-201ENST00000397081 CGNL1Q0VF96 1302 aa18.73■□□□□ 0.59
RAPGEF4-201ENST00000397081 FAM69CQ0P6D2 419 aa18.72■□□□□ 0.59
RAPGEF4-201ENST00000397081 STK26Q9P289 416 aa18.72■□□□□ 0.59
RAPGEF4-201ENST00000397081 RAPGEF3O95398 923 aa18.72■□□□□ 0.59
RAPGEF4-201ENST00000397081 SMC4Q9NTJ3 1288 aa18.72■□□□□ 0.59
RAPGEF4-201ENST00000397081 WASHC2CQ9Y4E1 1318 aa18.71■□□□□ 0.59
RAPGEF4-201ENST00000397081 TCP11L2Q8N4U5 519 aa18.71■□□□□ 0.59
RAPGEF4-201ENST00000397081 RWDD1Q9H446 243 aaPredicted RBP18.71■□□□□ 0.59
RAPGEF4-201ENST00000397081 TMEM132EQ6IEE7 984 aa18.7■□□□□ 0.58
RAPGEF4-201ENST00000397081 PDZRN3Q9UPQ7 1066 aa18.7■□□□□ 0.58
RAPGEF4-201ENST00000397081 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.7■□□□□ 0.58
RAPGEF4-201ENST00000397081 TTC37Q6PGP7 1564 aa18.69■□□□□ 0.58
RAPGEF4-201ENST00000397081 GOLGA6L3A6NEY3 463 aa18.69■□□□□ 0.58
RAPGEF4-201ENST00000397081 NCLP19338 710 aaKnown RBP18.69■□□□□ 0.58
RAPGEF4-201ENST00000397081 MLECQ14165 292 aa18.69■□□□□ 0.58
RAPGEF4-201ENST00000397081 SLC12A5Q9H2X9 1139 aa18.69■□□□□ 0.58
RAPGEF4-201ENST00000397081 CLASP1Q7Z460 1538 aa18.69■□□□□ 0.58
RAPGEF4-201ENST00000397081 PMFBP1Q8TBY8 1022 aa18.69■□□□□ 0.58
RAPGEF4-201ENST00000397081 PLCH2O75038 1416 aa18.68■□□□□ 0.58
RAPGEF4-201ENST00000397081 TRAPPC8Q9Y2L5 1435 aa18.68■□□□□ 0.58
RAPGEF4-201ENST00000397081 MAPK8IP3Q9UPT6 1336 aa18.68■□□□□ 0.58
RAPGEF4-201ENST00000397081 AMER1Q5JTC6 1135 aaPredicted RBP18.68■□□□□ 0.58
RAPGEF4-201ENST00000397081 TSR2Q969E8 191 aaKnown RBP18.68■□□□□ 0.58
RAPGEF4-201ENST00000397081 TRIM44Q96DX7 344 aaPredicted RBP18.68■□□□□ 0.58
RAPGEF4-201ENST00000397081 PRAG1Q86YV5 1406 aa18.68■□□□□ 0.58
RAPGEF4-201ENST00000397081 KDM2BQ8NHM5 1336 aa18.68■□□□□ 0.58
RAPGEF4-201ENST00000397081 PLEKHH2Q8IVE3 1493 aa18.68■□□□□ 0.58
RAPGEF4-201ENST00000397081 WDR7Q9Y4E6 1490 aa18.68■□□□□ 0.58
RAPGEF4-201ENST00000397081 HSP90AB1P08238 724 aaKnown RBP18.67■□□□□ 0.58
RAPGEF4-201ENST00000397081 TPRNQ4KMQ1 711 aa18.67■□□□□ 0.58
RAPGEF4-201ENST00000397081 HSCBQ8IWL3 235 aa18.67■□□□□ 0.58
RAPGEF4-201ENST00000397081 KDM5CP41229 1560 aa18.67■□□□□ 0.58
RAPGEF4-201ENST00000397081 L1TD1Q5T7N2 865 aaKnown RBP18.67■□□□□ 0.58
RAPGEF4-201ENST00000397081 ELL2O00472 640 aaPredicted RBP18.66■□□□□ 0.58
RAPGEF4-201ENST00000397081 CDC42BPAQ5VT25 1732 aa18.66■□□□□ 0.58
RAPGEF4-201ENST00000397081 FANCAO15360 1455 aa18.66■□□□□ 0.58
RAPGEF4-201ENST00000397081 WWC1Q8IX03 1113 aa18.66■□□□□ 0.58
RAPGEF4-201ENST00000397081 MTHFSP49914 203 aa18.66■□□□□ 0.58
RAPGEF4-201ENST00000397081 KANK1Q14678 1352 aa18.65■□□□□ 0.58
RAPGEF4-201ENST00000397081 PNNQ9H307 717 aaKnown RBP18.65■□□□□ 0.58
RAPGEF4-201ENST00000397081 APBB1O00213 710 aa18.65■□□□□ 0.58
RAPGEF4-201ENST00000397081 ZCCHC11Q5TAX3 1644 aaKnown RBP18.65■□□□□ 0.58
RAPGEF4-201ENST00000397081 SHROOM2Q13796 1616 aa18.64■□□□□ 0.57
RAPGEF4-201ENST00000397081 SRPK2P78362 688 aaKnown RBP18.63■□□□□ 0.57
RAPGEF4-201ENST00000397081 CD109Q6YHK3 1445 aa18.63■□□□□ 0.57
RAPGEF4-201ENST00000397081 ADGRL1O94910 1474 aa18.63■□□□□ 0.57
RAPGEF4-201ENST00000397081 UHRF1BP1Q6BDS2 1440 aa18.63■□□□□ 0.57
RAPGEF4-201ENST00000397081 PCDHB15Q9Y5E8 787 aa18.62■□□□□ 0.57
RAPGEF4-201ENST00000397081 SAMD9LQ8IVG5 1584 aa18.62■□□□□ 0.57
RAPGEF4-201ENST00000397081 ZBTB7CA1YPR0 619 aa18.62■□□□□ 0.57
RAPGEF4-201ENST00000397081 MBD5Q9P267 1494 aa18.62■□□□□ 0.57
RAPGEF4-201ENST00000397081 SLC24A1O60721 1099 aa18.62■□□□□ 0.57
RAPGEF4-201ENST00000397081 LNPKQ9C0E8 428 aa18.61■□□□□ 0.57
RAPGEF4-201ENST00000397081 RLBP1P12271 317 aa18.61■□□□□ 0.57
RAPGEF4-201ENST00000397081 C22orf23Q9BZE7 217 aa18.6■□□□□ 0.57
RAPGEF4-201ENST00000397081 TBC1D2Q9BYX2 928 aa18.6■□□□□ 0.57
RAPGEF4-201ENST00000397081 MYH16Q9H6N6 1097 aa18.6■□□□□ 0.57
RAPGEF4-201ENST00000397081 ADCY10Q96PN6 1610 aa18.59■□□□□ 0.57
RAPGEF4-201ENST00000397081 PDE3AQ14432 1141 aa18.59■□□□□ 0.57
RAPGEF4-201ENST00000397081 EIF3AQ14152 1382 aaKnown RBP18.58■□□□□ 0.57
RAPGEF4-201ENST00000397081 ZKSCAN2Q63HK3 967 aa18.58■□□□□ 0.57
RAPGEF4-201ENST00000397081 RUNDC1Q96C34 613 aa18.58■□□□□ 0.57
RAPGEF4-201ENST00000397081 DZIP1LQ8IYY4 767 aaKnown RBP18.58■□□□□ 0.56
RAPGEF4-201ENST00000397081 STAG3Q9UJ98 1225 aa18.58■□□□□ 0.56
RAPGEF4-201ENST00000397081 TRHP20396 242 aaPredicted RBP18.57■□□□□ 0.56
RAPGEF4-201ENST00000397081 ANP32BQ92688 251 aaKnown RBP18.57■□□□□ 0.56
RAPGEF4-201ENST00000397081 ARID3AQ99856 593 aa18.57■□□□□ 0.56
RAPGEF4-201ENST00000397081 PANK2Q9BZ23 570 aa18.57■□□□□ 0.56
RAPGEF4-201ENST00000397081 RARSP54136 660 aaKnown RBP18.57■□□□□ 0.56
RAPGEF4-201ENST00000397081 RSPH6AQ9H0K4 717 aa18.57■□□□□ 0.56
RAPGEF4-201ENST00000397081 ESF1Q9H501 851 aaKnown RBP18.57■□□□□ 0.56
RAPGEF4-201ENST00000397081 UHRF1BP1LA0JNW5 1464 aa18.56■□□□□ 0.56
RAPGEF4-201ENST00000397081 GGNBP2Q9H3C7 697 aa18.56■□□□□ 0.56
RAPGEF4-201ENST00000397081 ADGRL2O95490 1459 aa18.56■□□□□ 0.56
RAPGEF4-201ENST00000397081 NKTRP30414 1462 aaKnown RBP18.56■□□□□ 0.56
RAPGEF4-201ENST00000397081 FAM135AQ9P2D6 1515 aa18.56■□□□□ 0.56
RAPGEF4-201ENST00000397081 A2MP01023 1474 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms